Eabb014175.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupithecia abbreviata
Gene Symbol
-
Assembly
GCA_943735975.1
Location
CALSER010000128.1:3338253-3343913[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.15 8.9 7.2 3.4 2 22 187 207 186 207 0.95
2 16 4.2 2.5e+02 2.7 0.4 1 20 303 322 303 325 0.70
3 16 0.51 30 5.6 0.3 2 23 455 476 454 476 0.96
4 16 0.041 2.4 9.0 1.6 3 23 551 571 549 571 0.96
5 16 0.027 1.6 9.6 0.5 1 23 579 601 579 601 0.97
6 16 0.11 6.4 7.7 3.5 1 23 639 661 639 661 0.95
7 16 0.00021 0.012 16.2 4.0 1 23 670 692 670 692 0.99
8 16 0.42 25 5.8 3.6 1 23 772 794 772 794 0.98
9 16 0.0077 0.46 11.3 1.3 1 23 847 869 847 869 0.97
10 16 0.14 8.4 7.3 0.0 2 23 876 897 875 897 0.97
11 16 0.096 5.6 7.9 3.0 1 23 964 986 964 986 0.91
12 16 0.012 0.72 10.7 0.9 1 23 992 1014 992 1014 0.95
13 16 0.0058 0.34 11.7 2.6 1 23 1104 1126 1104 1126 0.97
14 16 0.00014 0.0085 16.7 1.4 1 23 1132 1154 1132 1154 0.99
15 16 0.27 16 6.4 2.0 1 23 1244 1266 1244 1266 0.96
16 16 0.0012 0.069 13.9 3.3 1 23 1277 1299 1277 1299 0.98

Sequence Information

Coding Sequence
ATGGAACAATACGCAGAAAGGGAAATAGTGAGCGGTAATAGTGATTCAAATGATACTGCCCCATCACAAGTCCACTCAAACAGAGACGAGAATCAATCAGCTCAGGGCACATCCGGTCAAAACTCCCCTAACTCAAGCAACGAAGATAAATCCAATAAACAGAACAAAAAAGCACCCAGACCTATCCCACAACTGATCCCCCTAAACGCATCAACCCCGAATCAAAACAAAGCATCAGGCGAACCGCCAGCGAAGAAATTCAAAGAATCCGCAAATTCAGATATAATAAGCACCTTTGAAAACCTACCCGGGGATATCACCGTGACGCCCGTAAACAACACGCCAAAAGAAACCGTAACTCGCAAGAAAAATGAGTCATTCTTCGATAAATTGAAAGAAAGATTACTAACGGAAACCGGCAAAGAAGGATCATTGAAATGCAAGAACTGCGGCTTCGAGAGCAAATGTCTTTCCGAACATTCGGTGCACGAAAAGAACTGTGCCGCGCAAGCCAGCCGCGTAATGGTGAACACTGCGCATTCCAGTATGGGTTCCACTCGATGCCAAAACTGCCGGCATCGGTGCAAATCCAGTGCGGATCTCTACGTACACATGCAAACATGTGGCAAGAAAGAAAGCACCACGAACGCAACGGAAACTAAAACAGAAACCGCCGAAGCTTCCACCTCAAGTTACGATAAAGACGCGGAACCGCACCCCATGGAGAACGTGGTCTTCGTATGGAATAACATAAACGAAGGCAACAAATTCGAAAGACCACTCGACATCAACATCAACGACGACTCCACCATGCCGGAGTCGCAGACAAATTACGACGCGGAAATAGTCGATGAGAACGAAGGCATGAATCTATCCCCCAACAGTTTGAGCCTCGGTAAGAATGTTTACAAATGCCCCGACTGCAAATTCTGGGCTGCTACTGCGTCAAGATTCCACGTTCATATTGTAGGACACTTGAACAAAAAGCCGTTTGAATGCTCGCTCTGCAAATACAAGTCTAACTGGCGCTGGGATATCACTAAACATATTAAATTGAAATCAGCTAGGGATCCAGAACACAATGACGCTAAAGTTTTGATGACAGACGAAACCGGTAGACGAAACTACAGCAAATACAATAAGTTCTTAGCTGTCCCGGTTCAAAACGTAAACGGCGAGAATGAATTCCACTTTATATATCAGAACACAGCATTAGATGCCTCGATGGAGATAGATGACTCATTGAATGATGCCGGAGAAATAGTGACCACATCGTACGATATGCAACCGCTGAACTTGCAAACGCAATTTGCTGATAACTCAATGGACGGGCAAGATAAGAAACCGAAGCGGACTTTGTGGAAATGCAAGAAGTGTAATTACAAGGACCCGTCGAAAGCAGCGTTGCTGGAGCACGTGAGACAGCACTCCAAAGACAACCTGGAGGACCCTCAGACGAAGAAGGCAGATGCCATCGACCCAGCTGACTTGGCGTACCGCTGCGGCCACTGCAACCAGTTGTCCAATTGGAAACACGTCATACAGAGACATTGCCGCTTGAAGCACGACGGAATAGTAAAAGTGATAACGACGGTGAAGCCCAAACCTGAGCCCACCCCGCCAGTCAGCACTGAACCCTTCAGCGACTTCTGTACCAAGTGCCCCTACAGAACCAACGACAAGACGCTCTTCAAAGAACATCTGCAACAGCACCGTCCGTCTTCCCAGTCCATCTTCAAATGCTACTTCTGCCCTTACTTCGTCAAGGACGAACAAGATCTGATCCAACATCTTTTACTTCACGGCATAACTGACCCTGAAGAATATATCGCAAAGGCGATGGGGTGTAAGTCTCCTCTGCCCGACCATGCGGCCTTGCACGAAGGCACCGTCGCCACCGGCGTCAACAAACGGCACAAGTGCCAGGAGTGCCCCTACGAAACCAATAGCAAATCACAGTTCATGTATCACGAGCAATTCCATCGCTCAACCTCCGCTGAGACACCCTACAAATGCCCCGAATGCAACTACAGCGTCTCCAAGAGACATCTTCTTCATCAACACTTGAGAGTTCACGGAATTTTCTCCAAGAAGAACGAAAGCGAAGCGGACCTTGAAGCATCCACATCTCCCCAGAAAGACAAATCGGACAGCTTTACTGACGAAATACCTTATGTGTGGGTATCGGCGAGAAACGAATTCCATAAAATGTACAAATGTCGCTATTGTTCATACGTTAATTCTCAGAAAAATAAGATACCTAACCACGAGAAGATTCACTGCCTCGGTTTCGAAAATAGTGAAGTGATAATATACAAATGTTTAGAATGTAAACATACATGTGATAATGCCGCGAGACTGGCGGAACATTCCAAGAAGCACGGCCTCCTGTACGGTCGCATTTACAGCTTCGTCGATGAAGATGTACCTGATGAGGATCAAATATCTCGGCTGCGGCGAGTTATTGAACTTGAAAAGAACGATGATTCTGCACCAGAAGATAACGCAAATGCTGAAATGAAAGAAATAAAAATGTTATACTTCTGTCAAAAGTGCCCAGCCCGATATTTTACTGAAAGCGAATTAAAGACTCATGGAAAATCTCATGACCTATCGAATGGAAATAAATGTAAGAATTGTGAATTCTCGGTGCCTGAAGAAGGAGAACTTATAGCTCACCAGTCTGTGCACTCGGACGAACACAACATTAGAACCAACATGCTGAAGTTTATTCACAATTCACATTCTCTTTATAAGGAGCCTCGACTCGAATCCAATCGTAGTTCTGAATCTTCCGAATTGACTTGGTCAGTTGCAGTCAACTATAAAAGTAATGAAAACGTTGACCCTCTACCGAAGAAAACGGAAACAAAGCACACACCCAAGCAGTACTGTTGTAAAGAATGCCCAGCCAAGTTTTTCAAAAGTTCGGCACTCACATACCATTTCGGATTACACGGTGGCGAGGGAGATCACAAGTGCAAGAAGTGCAGCTACGCTGTAAAGAACGTTGGCAATTTGGCTAAACACGAAATTTTACATGAACATGAGAGTAAATCTCCTAATCGTGAATACGAATCTGGCGATGATTTAGATTTCAAAAACATTCCTCTCTCAGGAACAGACCTATTTCAAAGAAAGACTGAAGCTCAAAAAAGAGTACTGACTGATAAAGACAAATTGGTTAAACCGAATGATCATTTTCCGCCTGTGTTACAAGCTGATCCCCAATTCGGATATCTGATGCATGGTAATCCTGAATTCATTTATCCCACGTATCTGAAAAATGGACGTCAAAAGGAAAAACGATACAAATGCCATAAATGCCCTTCAGCTTTTGAAAAGCGTGAACAATACAAAATACATTTATCTCTTCACGGTTCGAAACAACGTTATAAATGTGAGTTATGCGACTATTCTGTGAAGTATTACGCGAATTATGTTCAACATATGCGTAAGCATCAAATGAATGACGAGGCTCAGGCCGAAAGACTTAAAGGAACCAACGGTGACTCGGTAACACAGGAAGAATTTAAACAAGAAGACGGCACAGACAACATTAAGCTAGCAATCAAAACGATGCCTAAAGGAACACCAAAATCCGATTTTCAACAGTTCTCAGTAAGAGATCAACAAACCCTTCGGCTGTTGCAGCTTAGAAGATCGATGAATAATGGCGGTCACGATTCAAGCGCCGCTGAAACTTCGCCAGTGAAGGAGCGCAAAATGCATATGTGTCTTCTTTGCCCTTACACGAATCAGCGGCAAGATGCTTTGAACAATCATTACAGAAGACATGATGAAACAGATGTTTTGAATATTTCCGGTCACAAGTGCTCCTATTGTGACCTAGTAGTTGTGCAATCTCATTTCTTACGGGAGCATATAAAAACACACTTTAATTTTAATAAAACTCTCATACCTGAATGTTTTCTAGCTAACGATGATGTCAGTTTTACTATAACGAAAGTGGATGAGGAAAGCGACGAACCAGTTGATCTCAAATTAGAAATGAAAAATATTATTTTACCGTGTAATGATGATAGAATATTTGTTAAGATAAAGACAGGGGAACTTGTGGTAGAATAA
Protein Sequence
MEQYAEREIVSGNSDSNDTAPSQVHSNRDENQSAQGTSGQNSPNSSNEDKSNKQNKKAPRPIPQLIPLNASTPNQNKASGEPPAKKFKESANSDIISTFENLPGDITVTPVNNTPKETVTRKKNESFFDKLKERLLTETGKEGSLKCKNCGFESKCLSEHSVHEKNCAAQASRVMVNTAHSSMGSTRCQNCRHRCKSSADLYVHMQTCGKKESTTNATETKTETAEASTSSYDKDAEPHPMENVVFVWNNINEGNKFERPLDININDDSTMPESQTNYDAEIVDENEGMNLSPNSLSLGKNVYKCPDCKFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAVPVQNVNGENEFHFIYQNTALDASMEIDDSLNDAGEIVTTSYDMQPLNLQTQFADNSMDGQDKKPKRTLWKCKKCNYKDPSKAALLEHVRQHSKDNLEDPQTKKADAIDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIVKVITTVKPKPEPTPPVSTEPFSDFCTKCPYRTNDKTLFKEHLQQHRPSSQSIFKCYFCPYFVKDEQDLIQHLLLHGITDPEEYIAKAMGCKSPLPDHAALHEGTVATGVNKRHKCQECPYETNSKSQFMYHEQFHRSTSAETPYKCPECNYSVSKRHLLHQHLRVHGIFSKKNESEADLEASTSPQKDKSDSFTDEIPYVWVSARNEFHKMYKCRYCSYVNSQKNKIPNHEKIHCLGFENSEVIIYKCLECKHTCDNAARLAEHSKKHGLLYGRIYSFVDEDVPDEDQISRLRRVIELEKNDDSAPEDNANAEMKEIKMLYFCQKCPARYFTESELKTHGKSHDLSNGNKCKNCEFSVPEEGELIAHQSVHSDEHNIRTNMLKFIHNSHSLYKEPRLESNRSSESSELTWSVAVNYKSNENVDPLPKKTETKHTPKQYCCKECPAKFFKSSALTYHFGLHGGEGDHKCKKCSYAVKNVGNLAKHEILHEHESKSPNREYESGDDLDFKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERLKGTNGDSVTQEEFKQEDGTDNIKLAIKTMPKGTPKSDFQQFSVRDQQTLRLLQLRRSMNNGGHDSSAAETSPVKERKMHMCLLCPYTNQRQDALNNHYRRHDETDVLNISGHKCSYCDLVVVQSHFLREHIKTHFNFNKTLIPECFLANDDVSFTITKVDEESDEPVDLKLEMKNIILPCNDDRIFVKIKTGELVVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01220230;
90% Identity
iTF_00704516;
80% Identity
-