Basic Information

Insect: Eupithecia abbreviata
Gene Symbol: -
Assembly: GCA_943735975.1
Location: CALSER010000013.1:5179663-5221419[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 4.8 2.8e+02 2.5 0.1 2 23 429 450 428 450 0.86

2 15 0.092 5.4 7.9 0.0 1 23 460 483 460 483 0.94

3 15 1.4 84 4.2 1.8 2 21 667 686 666 687 0.93

4 15 0.065 3.8 8.4 4.3 2 23 723 744 722 744 0.95

5 15 0.18 10 7.0 2.6 1 23 755 778 755 778 0.92

6 15 0.0036 0.21 12.3 0.5 2 23 785 808 784 808 0.97

7 15 0.085 5 8.0 0.2 1 23 814 836 814 836 0.93

8 15 0.011 0.62 10.9 1.8 1 23 842 864 842 864 0.98

9 15 1.7 1e+02 3.9 0.0 2 19 875 892 875 895 0.88

10 15 0.43 25 5.8 0.1 1 23 973 995 973 995 0.96

11 15 2.5 1.5e+02 3.4 7.2 1 23 1002 1024 1002 1024 0.95

12 15 0.0017 0.099 13.4 1.8 1 23 1292 1315 1292 1315 0.95

13 15 5.4 3.2e+02 2.4 0.2 1 13 1322 1334 1322 1335 0.88

14 15 0.0049 0.29 11.9 0.2 2 23 1336 1358 1335 1358 0.96

15 15 0.00079 0.047 14.4 1.1 3 23 1400 1421 1398 1421 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	4.8	2.8e+02	2.5	0.1	2	23	429	450	428	450	0.86
2	15	0.092	5.4	7.9	0.0	1	23	460	483	460	483	0.94
3	15	1.4	84	4.2	1.8	2	21	667	686	666	687	0.93
4	15	0.065	3.8	8.4	4.3	2	23	723	744	722	744	0.95
5	15	0.18	10	7.0	2.6	1	23	755	778	755	778	0.92
6	15	0.0036	0.21	12.3	0.5	2	23	785	808	784	808	0.97
7	15	0.085	5	8.0	0.2	1	23	814	836	814	836	0.93
8	15	0.011	0.62	10.9	1.8	1	23	842	864	842	864	0.98
9	15	1.7	1e+02	3.9	0.0	2	19	875	892	875	895	0.88
10	15	0.43	25	5.8	0.1	1	23	973	995	973	995	0.96
11	15	2.5	1.5e+02	3.4	7.2	1	23	1002	1024	1002	1024	0.95
12	15	0.0017	0.099	13.4	1.8	1	23	1292	1315	1292	1315	0.95
13	15	5.4	3.2e+02	2.4	0.2	1	13	1322	1334	1322	1335	0.88
14	15	0.0049	0.29	11.9	0.2	2	23	1336	1358	1335	1358	0.96
15	15	0.00079	0.047	14.4	1.1	3	23	1400	1421	1398	1421	0.95

Sequence Information

Coding Sequence: ATGGAACGCGAAAAAAATTTAAACCCAAGATCCGTCCTCGGCTACGACATCGACCTAACACTAATCACAAAGAACCAACCAGTAGAAATGACAGCGAACGTCTACCAATTCCTAGTTAACCTAGAGCTTACTGAACAAGGTATTCCACAAAACTACGATATACCTATAGACGCAAGCAACCAACCGATAGTGCTAGACGATAACCAACTTTACGTACTAGACGATGGAACACAGATTCGAGCCTCGCAAATACACTTCGACAATGAAGACGCTCCTTTGGATCTATCGCTCGAACAACTCCCTTTTATCAAAATCAATGATGATGGTGAAATTATACCAGCTGATGATAATTTCAATGATATTACCCACAAAATCATAGCTAGCCCGGTACCTTTAACAAATTCCAGCCCTAAACATGGTTTCATCAACCACGTACCTTTTAAACTGGTATGCAATAACACCACTGGATTCGAAGCTCAGTTCACCAAATATCTAGAAGCTAGTAACAAAACTTACGCTACACTCAGCAATGTAACTAAAAAGAATAAATCTCCTAGAAGTTTAATCAGAGACAACTTTAACGACAAAGAAGAGTTCAAATTCACTCGCGATGAGATACTGAATATGCTAAAAGATTCACCAGTTACAAGTATACCTTATGAAAACAATGAAAAGAAACATGTGAGGAAGACAGACCCGACTAAAATGGCCCAAAAGACGAGTAGTAAAGCTATTGATATAGAAGGGCTAGTTATAGGCAATGGGGGCAATAGAAACTGCTTTATATGCGGTACAACTGTCAGCAACGATAAAGTATACCTCTTTGATAAAGAAGATCAGAAAATACATAAATGTTCACCACAAAAGAAAATGTCTACACAACTCAAAATAATATGCGAAAATTGCTTGAACCATAATTTCAGACCATCTAGAATGAAGAACGCAAATCAACTGCTGAACTCCGAAGAGTATTTGGTAATAAGGAATAACCAGCAATACATATTTCAAAAGACGAAGAACTTCAAATTTCGAACGGATACCATAAACAAATCGAAGATGAGCAAGAAGGATGAGTTTGTGAAGTTTGATATAGGTTCTGATGGTGAGATCGTCACGAAAGCGGTTGACGATGACGTCATTCTGGTACAAGATGGTAGAAGAGGTAGTTCTAGTGATGTAGAAGTTATAGAGGAAGTAGACAAGATCATAGAAAACTTGGAGGAAGCAGACGAGGAAGTCAAAGTGTTTTTAGGGAAGTATGACTGCGATGAAATGAATGAACTGAAATGCAGGTTTTGTGAGCGAATATTTTCGGCTGTATCAGAAGTGATAGAACATGGAGAGTTGCACAAGCACGATATAGATGATGATGTTGTGTTTCCATGTCCTTTATGTGACTTCGGCTACGCGAGCTTCCAATGGCTGAGAGGGCACTTGATGGCGGCACATGATAAGAAGGCCAGCAAAGCGAAAGAATCTCAGAAAGGCGCAGAAAGCTTTGGAGTCGCGCGGAATTCGAACGAATCGATCCACCCAGATCTTATAATAAAGACGGAAGTTAAACAAGAGGCGATAAGCAGTGACGATGAGATTTGGATAGTGCAAACGGGCGATGATGAGTCGACAGGACCTCTGAAAGACATTCTAGAAGCTGCCAAGTCTGCCAAGGGTACATCACTGTTGGACGTAGCGGGTGAAGAAAGGTATGTAGGTACGATAAGCAGTGACGATGAGATTTGGATAGTGCAAACGGGCGATGATGAGTCGACAGGACCTCTGAAAGACATTCTAGAAGCTGCCAAGTCTGCCAAGGTAATGTCACAAAAGGGTACCTCACTGTTGGACGTAGCGAATGAAGAAAGGTATGTAGGTACGATAAGCAGTGACGATGAGATTTGGATAGTGCAAACGGGCGATGTTGAGTCGACAGGACCTCTGAAAGACATTCTCGAAGCTGCCAAGTCTGCCAAGGTTGATAAAGGTGTCAATAAAACCAAGAAATGCCAAACCTGCGGCAATAACTACCCATCGATAGAATCACTGAGGTCTCACAAATGTCGAGGGAAAATACGTAAAACTAACGAAGATTCCATGATAATACCAACAGAGGAAGATTTTATGAGGAAACATAAGAAGTCTAAAAACCCCTCCGAACCTCAAATCGTGACTTGCCACAACTGTAATCAGTCTTTCACTTCTAAAGTACGCCTCAAATTTCACATGCAATTCCACGACATGACATCTATGCTCACCGACGGCCATTACAAATGCTTGCAATGCGACGACATGTTCACAACGGAGACGCAGCTGTTCGACCATGTTCACTTCACTCATGAGAAGATACGCAGGTGGCAGTGTCCTGTGCAGGGGTGTCTGAAGACTTTCTACTTAAGGGCAACACTGACAAAGCACAGTCGAACGCACACAGACACGCGTCGCTATGTGTGCGTGACATGTGGTAAAAGATTTCTGGATAAACAGACGCTGGACGAGCATGGAGTGACGCATTTACAGATCAAACCTTACCAATGCCACATTTGCCTGAAGCAACTAACCCGCGTCTCTCGTTTGCGCATGCACGTGCGCGCGCACGAGGAAGAACTAGCGCCGACGCTGTTGCCCGTCTGCAGGGTCTGTCGCCGGGCGTTTAGAGATGCCGTAGAAGCGCAGGAGCACGCAACGAAATCTTCGGATTGCATCGAAGCGATTGCCGGTGAAGTTAAGACTGAGGAAGAAACAGCTGTACAGCTGTCGCCCACTAGTGGGATTGTGCGGCAAACGATACAAGTTATCGAGTGCCCCTCCCCCAAAACACGAGTGCCTCGCCAAGTAGCGTCTCCCGTAGCGGCCCCGCTTCTATCCTCGTTGACCAGCGACGCCCTACCACTTATAAGAGTGGTCGAGATCGAGAAGGCTTTTAGATGTGAATATTGTGAAGATGTATTCTACATTGAAGAAGGACTGAACGACCACAGGGCGATTCACAAGGGCGTCAAGAACCCATTCACGTGTCACATTTGCAAAGTTAGCTTTGCTACTTATTCCAGgtGCACTACACATAAGACAACTCATGGTTTCTACAAGCGACCCGCGGCGGGTAATGACCAAGCTACGGGCGTCGTTGGCTACGGCGACTTTCCAACTGTCAAACACTTCTTGTGCGAGGTATGTCCACTGCTGGACATGCATTTCCCATACAAGGAGAGTTTTGCGATTATGATTGTTAGGTGCACCACTCACAAGACAACTCATGGTTTCTACAAGCGACCCGCGGCGGGTAATGACCAAGCTACGGGCGTCGTTGGCTACGGCGACTTTCCGACTGTCAAACACTTCTTGTGCGAGGTATGTCCACTGCTGGACATGCATTTCCTATACAAGGAGAGTTTTGCGATTATAATTGTTAGGTGCACCACTCACAAGACAACTCATGGTTTCTACAAGCGACCCGCGGCCGGTAATGACCAAGCTACGGGCGGCGTTGGCTACGGCGACTTTCCGACTGTCAAACACTTCTTGTGCGAGGTATGTCCACTGCTGGACTTGCATTTCCCAAGCAAGGAGAGTTTTGCGATTATAATTGTTAGGTGCACCACTCACAAGACAACTCATGGTTTCTACAAGCGACCCGCGGCCTCTAATGACCAAGCTACGGGCGGCGTTGGCTACGGCGACTTTCCGACTATCAAACACTTCTTGTGCGAGGTATGTCCACTGCTGGACATGCATTTCCCATACAAGGAGAGTTTTGCGATTATAATTGTTAGGTGCACCACTCACAAGACAACTCATGGTTTCTACAAGCGACCCGCGGCTGGTAATGACCAAGCTACGGGCGTCATTGGCTACGGCGACTTCCCTACTGTCAAACACTTCTTGTGCGAGGACTGTGGAAGATCCTATTTGCACTGGACGTACCTTCAAGTGCACAGAAGAATGAAACACCCCAATGAAAACTACCCCCACAACTGTAACCAATGTGAAATGACGTTCCCTAACAGAATACCCTGCCGCGACTGTGATGAGGTTCTGCCAAACAAAACTGCCCTCTATAAACATAGGAAGAAGGAGCATATTGGTGTGTCTACGAGCTCTAACACTAGCGCTGCCGCCGGCTCTACTTGCAACAGTCAAGTTGAAAGAACGCCTATGTCAATGCGCAGTAAGTTAGTGTCGTGCGGCGTGCGCGCCTGGGCGTGCTCGCGCTGCCCCAAGCGCTTCCGGATCCGGTCAGAACTGCGCTCGCATACTAGGCTCAAGCACCCGGCTTTTATCGCTGTACTAGAGGTGCAAGGTCGAAATCTGAGTGCCGAAGAGGCGGTCAGCATCATTAACTCAAACAACATCAGTCAAGATAGAATCATTGAGATCAGTGTCATGTCTTTCGCAAAGggtgcttcaagcatagtcccgaactgcgcccgcgcTCTAGCCATGCTGGGGAACGTACCGCGCACACAGATCATGGTGCCGAGGACGAATGACATGCACTTTGGTAAGGTACATTTTATACTCGTATACATCTCAGCACTGGCGTAA
Protein Sequence: MEREKNLNPRSVLGYDIDLTLITKNQPVEMTANVYQFLVNLELTEQGIPQNYDIPIDASNQPIVLDDNQLYVLDDGTQIRASQIHFDNEDAPLDLSLEQLPFIKINDDGEIIPADDNFNDITHKIIASPVPLTNSSPKHGFINHVPFKLVCNNTTGFEAQFTKYLEASNKTYATLSNVTKKNKSPRSLIRDNFNDKEEFKFTRDEILNMLKDSPVTSIPYENNEKKHVRKTDPTKMAQKTSSKAIDIEGLVIGNGGNRNCFICGTTVSNDKVYLFDKEDQKIHKCSPQKKMSTQLKIICENCLNHNFRPSRMKNANQLLNSEEYLVIRNNQQYIFQKTKNFKFRTDTINKSKMSKKDEFVKFDIGSDGEIVTKAVDDDVILVQDGRRGSSSDVEVIEEVDKIIENLEEADEEVKVFLGKYDCDEMNELKCRFCERIFSAVSEVIEHGELHKHDIDDDVVFPCPLCDFGYASFQWLRGHLMAAHDKKASKAKESQKGAESFGVARNSNESIHPDLIIKTEVKQEAISSDDEIWIVQTGDDESTGPLKDILEAAKSAKGTSLLDVAGEERYVGTISSDDEIWIVQTGDDESTGPLKDILEAAKSAKVMSQKGTSLLDVANEERYVGTISSDDEIWIVQTGDVESTGPLKDILEAAKSAKVDKGVNKTKKCQTCGNNYPSIESLRSHKCRGKIRKTNEDSMIIPTEEDFMRKHKKSKNPSEPQIVTCHNCNQSFTSKVRLKFHMQFHDMTSMLTDGHYKCLQCDDMFTTETQLFDHVHFTHEKIRRWQCPVQGCLKTFYLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPYQCHICLKQLTRVSRLRMHVRAHEEELAPTLLPVCRVCRRAFRDAVEAQEHATKSSDCIEAIAGEVKTEEETAVQLSPTSGIVRQTIQVIECPSPKTRVPRQVASPVAAPLLSSLTSDALPLIRVVEIEKAFRCEYCEDVFYIEEGLNDHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRPAAGNDQATGVVGYGDFPTVKHFLCEVCPLLDMHFPYKESFAIMIVRCTTHKTTHGFYKRPAAGNDQATGVVGYGDFPTVKHFLCEVCPLLDMHFLYKESFAIIIVRCTTHKTTHGFYKRPAAGNDQATGGVGYGDFPTVKHFLCEVCPLLDLHFPSKESFAIIIVRCTTHKTTHGFYKRPAASNDQATGGVGYGDFPTIKHFLCEVCPLLDMHFPYKESFAIIIVRCTTHKTTHGFYKRPAAGNDQATGVIGYGDFPTVKHFLCEDCGRSYLHWTYLQVHRRMKHPNENYPHNCNQCEMTFPNRIPCRDCDEVLPNKTALYKHRKKEHIGVSTSSNTSAAAGSTCNSQVERTPMSMRSKLVSCGVRAWACSRCPKRFRIRSELRSHTRLKHPAFIAVLEVQGRNLSAEEAVSIINSNNISQDRIIEISVMSFAKGASSIVPNCARALAMLGNVPRTQIMVPRTNDMHFGKVHFILVYISALA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00705522;
90% Identity: -
80% Identity: -