Basic Information

Insect: Eupithecia abbreviata
Gene Symbol: RREB1
Assembly: GCA_943735975.1
Location: CALSER010000037.1:192139-207721[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.17 9.9 7.1 1.4 1 23 91 114 91 114 0.91

2 12 2.4 1.4e+02 3.4 0.1 1 22 143 164 143 164 0.94

3 12 0.022 1.3 9.9 0.1 1 23 291 313 291 313 0.97

4 12 0.0012 0.069 13.9 0.4 1 23 322 344 322 344 0.99

5 12 0.00072 0.043 14.5 2.0 1 23 350 373 350 373 0.97

6 12 0.0029 0.17 12.6 1.6 1 23 725 748 725 748 0.96

7 12 0.00024 0.014 16.0 1.3 2 23 935 956 934 956 0.97

8 12 0.025 1.5 9.7 5.3 1 23 962 985 962 985 0.97

9 12 0.064 3.8 8.4 1.0 1 23 1018 1042 1018 1042 0.93

10 12 0.64 38 5.3 0.7 1 23 1065 1088 1065 1088 0.92

11 12 0.0018 0.11 13.3 0.2 2 23 1128 1149 1127 1149 0.96

12 12 0.028 1.6 9.5 5.3 1 23 1155 1177 1155 1177 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.17	9.9	7.1	1.4	1	23	91	114	91	114	0.91
2	12	2.4	1.4e+02	3.4	0.1	1	22	143	164	143	164	0.94
3	12	0.022	1.3	9.9	0.1	1	23	291	313	291	313	0.97
4	12	0.0012	0.069	13.9	0.4	1	23	322	344	322	344	0.99
5	12	0.00072	0.043	14.5	2.0	1	23	350	373	350	373	0.97
6	12	0.0029	0.17	12.6	1.6	1	23	725	748	725	748	0.96
7	12	0.00024	0.014	16.0	1.3	2	23	935	956	934	956	0.97
8	12	0.025	1.5	9.7	5.3	1	23	962	985	962	985	0.97
9	12	0.064	3.8	8.4	1.0	1	23	1018	1042	1018	1042	0.93
10	12	0.64	38	5.3	0.7	1	23	1065	1088	1065	1088	0.92
11	12	0.0018	0.11	13.3	0.2	2	23	1128	1149	1127	1149	0.96
12	12	0.028	1.6	9.5	5.3	1	23	1155	1177	1155	1177	0.97

Sequence Information

Coding Sequence: ATGCAGGGCGCTGCCGGCGTGCCTGCGGCCCCCGCCGCCTCACCACCCCCCTCGCAACAAATCAAAACAGAGGAAGTCGAGGCTAAAATCGAGGCCGAGGAAATGGAAAGGATGATTGTCGAGCGGCAGGAGCTGAGAGGCACTCGCACCACCAGCATCGACAGCGACAACCGCTCCGACCGGAGCGAGGAGGAGGAGTGCCGCCGCGCGAGGAAGCGAGCCGCCTCCGCCTCCCCGACTCCCATGCCCCTGGACAAGAGAACCGCGCGCTTCGAATGCCCCACATGCCACCAAAGATTTGACTCCGGGAATGCATTCGACATGCACCGCTTCACAGCCCACGGCGACGATTCCCGCTCGGGATACGAAGATCTCGTCGACTTCTCCAACAAAAAGTTCCCTGACATCACCCGCGGACTCCACAACTTCCGATGCGATCTGTGCATGAGAGAATTCGTCAACGCACAAGTCCTGGACATCCACAGGAAGACGTGCTCCCCTTCCAACAGAATACCTACACCCGACCGCGATCGCAGAGAAGATTTCTTCGCGAAACTGGACCTTAGGAACAGGTCGTTTGGTATTCCGGGCACGTTGACTCCGCCTATGGAGAGGTTCACGACGAAGTTCGACGATGGACATATCAGTAACGGTATGCGGCATATGGACGCCGCCCGAGACTTGGCAGATATTCAATCGATACTTAATGTCACGTCGACGGGAAGCCTTTTAGAGAGACTCACTGGAACCAGAGTCAATTTAGAAAGTTCCGTGTTGACGCCACCGGATACTATCGGGAAAGATCGCGACCAGGAAGAAACGCAGGACAACTTCGCCGCTGAGTTTAGACGGATGAAGCTACGAGGAGAATTCCCTTGTAGATTATGTCCCGCGAAGTTTCCGAATCTACGAGCCCTGAAGGGACATAACAGAGTGCATCTCAGCGGAACTGGCCCCGGTCCTTATCAATGCAACATGTGTCCGCACGCTTCCCTGGACAAGGCAGCGCTGGTGCGGCACATGAGGACTCACAACGGAGACAGACCTTACGAATGCGCTGTTTGCAACTATGCTTTCACTACCAAAGCAAATTGCGAGAGACATTTGAGAAACAGACACGCTAAAGTCACTAGAGAAGATGTAAAACGTTCTATCATTTACCATCCGTCCGAAGATCCTAACAACGACGAAGTCAACTCAAAACTGGCAAGAGATGAGGTGAAACGAACTCTTACTTTCCATTCTCCACCTGATATTGACCGGCGCAACGAAAGCACTGGCCGAGATACTCCGGTAACTCACCATTTCTCACCCGGTTTCATTAGTAAAGGACATCCGGTCGCTGCGTTGACAACAAAGCCAATTCCCGATCTAACCCCGCTTCCACCGAGGGAACCTGATCTACCTAAACCGAAAATTAGCATCAAAAGCATCGGGCAGCTCACACAGATTCCAGAGTTTAGGGTTCCAGAGCTATCATTCAAGAACAACGAACAACATATCAATTCCGATGTTTATGATGAGGAAGCTCCGGTGGATTTGAGCCGGAATGACAATAGCTGTGACGTTCTCGATCTCAGCAAGAAGAAGCGTGATAGTGACAATGAGGAGTCCAAAACTCCTACTCTATCGCGTCCAGCATTCGAAGCCGATGCGGCATCGGCTGCAGCTACAGCATTTGAGAAAACAAGACTACTACTCGCTCAACAGAGACTTTTTGAAAACAACCTACCAAAGATTGACTCAGCTTACTACGCAACTCAACTTTCACAACTCTATGCCGGAACCGTCCCCGGTTTGCCTGGTCTTCCTATACCCCCTTCTTTTCCTTATTTTCTCCAGCCTTCTTTTTTTCCCCACCCTTCTGACTCCCCCGAAATGACAGAGATCAAACAACGCATTCAGAAGGAAATCATTCGCGGGCTGAGCATGTCTGGTGGGAGACTCGTCCCTAATGAAGCGGAGATTCAGCCGAAGCAGGAGCCTGAACCCGAGATTGAGGAGAAGCCAGCCCCACTGGTCATCTCTCCCGCTCCCTCTCCGCTCTCGGAATCTCCGCGCCCGATGTCAAACGGTGGAATGGCCTCACAGACAGATTCCGTGAAAATGGTCATCAAGAACGGAGTTCTCATGCCAAAGCAGAAGCAAAGACGTTACCGAACAGAAAGACCTTTTTCGTGCTCCCAATGCTCTGCGCGATTTACACTGCGCTCGAACATGGAGCGCCACGTGAAGCAGCAACATCCTCAGCACTGGAGCGTGAGAAGACCGGCCCCTAGGGCTCCACCACCGTACCCTACATCTGATGCTTTGGCTGACCGTGTGAAATTCGCATTGTTAGCCCGTCATCTCGAAAGACCACTGCAACAATCCGAGCGCTCACCTATCCGCCGTGACTCAGACGAAGTTGCTGATAATGAAGAAGACGAAGACGATACTTTGGTTATCGATGAAGAACCAGAGATGGAGCCCGAAGAACATCCAGCCGCAAAACGAGCAGCGGCTGAAATTCTCATGGCAACATGCCAGCAAGAAATGCACAAGGACTTTGACCTCAAAATCGCTGGCAATCTCATTAACAAGCCAGTCGACAAGATTGAGACAGGCACGGATCCTATACCACTGGACGCCTTGCCTGTTCCGGTGGTGCCTACAAGGAGTGATGAAGAAGAAGATGAAGAAGGCTTGGTCGCTTCCACTAGTGAGGGCAATAACTCTGGCAGCGATGAAAACAAATCCGAATCCGATGGAACCCAACCGCCCAAGAAGCGCTCAGCTTACAGCTTAGCCCCCAACCGCGTGTCATGCCCCTACTGCCACCGGAAGTTCCCTTGGTCTTCCTCCCTTCGCCGCCATGTCCTCACTCACACAGGACAGAAGCCATTCAAGTGCCCCCACTGCCCCTTGCTCTTCACCACAAAATCCAACTGCGACAGACACCTACTGCGAAAGCATGGCGGCTCAGCGCGAGCGATCCTCGCAGAGCCGCTTTCCGATGCCGTCTCCCCACCACAACCAGGAAACGACACCAGAACCGTACCAGATCGCCCATTCAAATGTGGAACATGTCCCACGAGCACTTTTTCCTCTGTGGACAGCTTGAAGAAGCATATCACCTCCCGCCACGTCTCCGGAGAGTCTCAACCTAGCTCGCCAAGCCCTGACCACGATGAGACACTAGACGGTCTAGTGTTCAAGTGCCACCTCTGCGAGGCTGGGTACAACGACAGAAGTAGGACACTGAATCATCTCGCGAACGCACACACGACGGAGTATGAGCAGCTGGTCAGCAAGGGAGCGTTGGATGCGGCCAGTGACAAGAGCGAAAACACGGATGATGATGACAGGGGAAAGTTTCCTGATCACGCTAATAGAAAGGTGGTCTGCGCATTCTGCGTCCGTCGCTTCTGGTCCGCCGAGGACCTCCGTCGCCACATGCGCACGCACTCCGGCGAGCGTCCCTTCGCCTGCGACCTCTGCCGGCGACGCTTCACACTGAAGCACAGCATGCTGCGCCACAGGAAGAAGCATAGAGAAGAGACCGATGATGAGGAGGCTTGCAACACGCCCGAGAAGACGAATGGCTACCGCTTCCAAGACGAAGATTCCGGAAATGAAATCCCAAACAACGTGAACAACAACAACTCCCCGCCTGCAGCGCCCTTCGAGAAAAAAATCAAACTGGATATGATGTCCCGGAAATATTCCTCCGAAGAAAATGACGGAGAGAACGGCAGCGACCTGATTGGGAAACTACTTGGCATTCCCGATAAGACTATCAACAAGCTCCTGTCTTCAGCGGACGAAGCAGCCAAGATACTGGGAGTGAATAAATGA
Protein Sequence: MQGAAGVPAAPAASPPPSQQIKTEEVEAKIEAEEMERMIVERQELRGTRTTSIDSDNRSDRSEEEECRRARKRAASASPTPMPLDKRTARFECPTCHQRFDSGNAFDMHRFTAHGDDSRSGYEDLVDFSNKKFPDITRGLHNFRCDLCMREFVNAQVLDIHRKTCSPSNRIPTPDRDRREDFFAKLDLRNRSFGIPGTLTPPMERFTTKFDDGHISNGMRHMDAARDLADIQSILNVTSTGSLLERLTGTRVNLESSVLTPPDTIGKDRDQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLARDEVKRTLTFHSPPDIDRRNESTGRDTPVTHHFSPGFISKGHPVAALTTKPIPDLTPLPPREPDLPKPKISIKSIGQLTQIPEFRVPELSFKNNEQHINSDVYDEEAPVDLSRNDNSCDVLDLSKKKRDSDNEESKTPTLSRPAFEADAASAAATAFEKTRLLLAQQRLFENNLPKIDSAYYATQLSQLYAGTVPGLPGLPIPPSFPYFLQPSFFPHPSDSPEMTEIKQRIQKEIIRGLSMSGGRLVPNEAEIQPKQEPEPEIEEKPAPLVISPAPSPLSESPRPMSNGGMASQTDSVKMVIKNGVLMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPAPRAPPPYPTSDALADRVKFALLARHLERPLQQSERSPIRRDSDEVADNEEDEDDTLVIDEEPEMEPEEHPAAKRAAAEILMATCQQEMHKDFDLKIAGNLINKPVDKIETGTDPIPLDALPVPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESDGTQPPKKRSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSARAILAEPLSDAVSPPQPGNDTRTVPDRPFKCGTCPTSTFSSVDSLKKHITSRHVSGESQPSSPSPDHDETLDGLVFKCHLCEAGYNDRSRTLNHLANAHTTEYEQLVSKGALDAASDKSENTDDDDRGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREETDDEEACNTPEKTNGYRFQDEDSGNEIPNNVNNNNSPPAAPFEKKIKLDMMSRKYSSEENDGENGSDLIGKLLGIPDKTINKLLSSADEAAKILGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00661758;
90% Identity: iTF_01161723;
80% Identity: -