Basic Information

Insect: Eupithecia abbreviata
Gene Symbol: -
Assembly: GCA_943735975.1
Location: CALSER010000047.1:2430001-2438732[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.039 2.3 9.1 1.4 1 23 195 218 195 218 0.92

2 29 0.0011 0.064 14.0 1.0 3 22 259 278 259 278 0.95

3 29 0.00013 0.0079 16.8 0.3 2 23 313 335 313 335 0.97

4 29 0.00018 0.011 16.4 0.8 1 23 383 406 383 406 0.97

5 29 0.0093 0.55 11.0 0.0 1 23 440 462 440 462 0.96

6 29 0.00033 0.019 15.6 1.8 2 23 505 526 504 526 0.97

7 29 0.00022 0.013 16.2 2.0 2 23 576 598 576 598 0.97

8 29 0.00022 0.013 16.2 1.3 1 23 648 671 648 671 0.97

9 29 0.0003 0.018 15.7 0.1 1 23 726 748 726 748 0.97

10 29 0.0002 0.012 16.3 4.9 1 23 759 781 759 781 0.98

11 29 0.13 7.7 7.4 0.6 2 23 793 814 792 814 0.96

12 29 0.0035 0.2 12.4 1.0 1 23 824 846 824 846 0.98

13 29 0.78 46 5.0 4.3 1 23 875 897 875 897 0.91

14 29 0.0012 0.074 13.8 5.6 1 23 908 930 908 930 0.98

15 29 0.0019 0.11 13.2 1.2 1 23 938 960 938 960 0.96

16 29 3.1e-05 0.0018 18.9 0.4 2 23 980 1002 979 1002 0.97

17 29 0.012 0.72 10.7 3.0 1 23 1020 1042 1020 1042 0.98

18 29 0.21 12 6.8 0.6 2 23 1083 1105 1082 1105 0.90

19 29 0.0034 0.2 12.4 0.2 2 23 1128 1149 1127 1149 0.95

20 29 0.38 22 6.0 0.3 2 20 1153 1171 1152 1172 0.92

21 29 0.55 33 5.5 1.0 2 23 1192 1214 1191 1214 0.93

22 29 0.02 1.2 10.0 0.6 2 23 1230 1251 1229 1251 0.94

23 29 0.47 28 5.7 4.6 5 23 1261 1279 1259 1279 0.94

24 29 0.00033 0.019 15.6 1.9 1 23 1289 1312 1289 1312 0.96

25 29 5.8 3.4e+02 2.2 2.4 2 23 1329 1347 1329 1347 0.77

26 29 3.3 2e+02 3.0 2.8 2 20 1351 1369 1350 1371 0.92

27 29 0.19 11 6.9 2.2 2 23 1419 1440 1418 1440 0.94

28 29 0.0059 0.35 11.7 0.5 2 23 1451 1473 1450 1473 0.96

29 29 0.053 3.2 8.6 3.3 2 20 1511 1529 1510 1531 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.039	2.3	9.1	1.4	1	23	195	218	195	218	0.92
2	29	0.0011	0.064	14.0	1.0	3	22	259	278	259	278	0.95
3	29	0.00013	0.0079	16.8	0.3	2	23	313	335	313	335	0.97
4	29	0.00018	0.011	16.4	0.8	1	23	383	406	383	406	0.97
5	29	0.0093	0.55	11.0	0.0	1	23	440	462	440	462	0.96
6	29	0.00033	0.019	15.6	1.8	2	23	505	526	504	526	0.97
7	29	0.00022	0.013	16.2	2.0	2	23	576	598	576	598	0.97
8	29	0.00022	0.013	16.2	1.3	1	23	648	671	648	671	0.97
9	29	0.0003	0.018	15.7	0.1	1	23	726	748	726	748	0.97
10	29	0.0002	0.012	16.3	4.9	1	23	759	781	759	781	0.98
11	29	0.13	7.7	7.4	0.6	2	23	793	814	792	814	0.96
12	29	0.0035	0.2	12.4	1.0	1	23	824	846	824	846	0.98
13	29	0.78	46	5.0	4.3	1	23	875	897	875	897	0.91
14	29	0.0012	0.074	13.8	5.6	1	23	908	930	908	930	0.98
15	29	0.0019	0.11	13.2	1.2	1	23	938	960	938	960	0.96
16	29	3.1e-05	0.0018	18.9	0.4	2	23	980	1002	979	1002	0.97
17	29	0.012	0.72	10.7	3.0	1	23	1020	1042	1020	1042	0.98
18	29	0.21	12	6.8	0.6	2	23	1083	1105	1082	1105	0.90
19	29	0.0034	0.2	12.4	0.2	2	23	1128	1149	1127	1149	0.95
20	29	0.38	22	6.0	0.3	2	20	1153	1171	1152	1172	0.92
21	29	0.55	33	5.5	1.0	2	23	1192	1214	1191	1214	0.93
22	29	0.02	1.2	10.0	0.6	2	23	1230	1251	1229	1251	0.94
23	29	0.47	28	5.7	4.6	5	23	1261	1279	1259	1279	0.94
24	29	0.00033	0.019	15.6	1.9	1	23	1289	1312	1289	1312	0.96
25	29	5.8	3.4e+02	2.2	2.4	2	23	1329	1347	1329	1347	0.77
26	29	3.3	2e+02	3.0	2.8	2	20	1351	1369	1350	1371	0.92
27	29	0.19	11	6.9	2.2	2	23	1419	1440	1418	1440	0.94
28	29	0.0059	0.35	11.7	0.5	2	23	1451	1473	1450	1473	0.96
29	29	0.053	3.2	8.6	3.3	2	20	1511	1529	1510	1531	0.94

Sequence Information

Coding Sequence: ATGGCCCTCAAACTTGGAAAATGTAGGCTTTGCCTCAAACTCGGGGACTTCTTCTCTATCTTCGCCTCGGACAACGATGTACAGCTCTCTGAAATGGTCATGGCATGTTCCAGGATAAAGGTGTATGATGGAGATGGACTTCCAGACAAAGTGTGTTCCGATTGTGTACAAAAACTTAGCAGCGCCTACATATTCAAGCAGCAATGTGAGCGGTCTGATCAAGAACTACGGCGAAACTATATTCCACCCCCTGGTTTTAGTATCAGTCCACCGCCACCAACAAATCGAGAGAGCAGCGACTCTGCCTTTTCAACCCTCACAGAGAGCTCAAACCTCAAGTCATCTTTCTCTGAAAATAAAGTTACTCCTATAAGCAGAGGCAGAAAACGAAGCGTTGAGAGTGATGCGTCGATTGATAGCCGGTCCCAAGAACGGCCTGGTAGCTCCAAGCGTGTGGAAGAACTCAAAAAGGCACAAAAACCGAAGCGACCGCGATACTCCGCAGACTCTGATTACGAAGATAACGGAGCTTCCAGTATTGTCAACGAAACCGACTCAGACGAACCTCTCTTAAAAAACGAGCATGCGTGCCCCCTCTGCCCCAAGACCTTCAAATGGCTTAAGAGTATGAAGATTCACATGGCTCATATACACACAGGAAAGAAAGCTAACTCAAGAGCCCCAGAAGTTAATGTCAATATTCCTATAAAGATTGCTAATAAAAAAGATCAACAAAAAGACGAAGTAACCGAAAGTGATGATGAACAAATAGGCTGTGACAAATGTGGTAAGAAATTCAAACTGAAAATTATGCTGAAGCGGCATCAAGAAACTTGTCAGAAGTCACCTGCGAAGCTCACCTCCAAGTCTCCTATGAAGGAGCTGGTGATCACCCTGGAGCCCATAGACGCCGTGCCACAGCTACCCAAGAAACCCACGTGCGAGTACTGTACGGCGCAATTCAAAACTGTGGACAACTTGGAGAAGCATCTGAGAGTGGTCCATGCAGCGACACGGAAAAAAACAAACAGCGAAACTAAGCAAGGGGGTACACTTATATGCCTCTATTGCAGTAAAGAGTTTGAAGATTACTACATCTACAGTTCCCATTTCAATGGCTGCCCGATGAAAGATAACTTTTCCGTTTACCAATGTCCCATGTGTCCGAAAAGCTGCAGTCGCCTCACTGCTTACGTGAGCCACGTGAGGAACGCACACGGGCACTATCAGAGGCACAGCGCGGGCAGCGCTGCCAGTGCCAGTCCGAAAGTGGAGCCGGAGCTTCGGCTGTCCGGCGCGAGCCCGGCCACCGGAGTCTTCGAGTGCCGCATGTGCAGCAAGAAGCTGGCAACACAGGCGCTGCTGATCGCACACTTGGCCGCGCACATGTCCAATGCCGACGAGGACGACACGATCGCGGACGACTTTGATTCAAGAGATGACACGGTAGCCGACGATTCGATGTCGGTCCAATCAGCGCAGAGCTCGCAACCATCCCAATCGGGCCCTATGAAATGCCGCTATTGCGATAAAGAGTTTACGTACAAGAAGTCTCTTGCGTCGCACGAACTGAAGCACACCGAGGAGAACGTGACCGTGAAGCACGAGCCTCCCGACAAGGCGTCCCACGCCGACCTGCTCGCGGAGAAGCACCACGTCGCGGACACGCCCAACAACCAGGAATATGATAGCGAATCTAGTCAAGACGAGGGAGACGAGGATAACACGTGCGATATTTGCGAGAAACAGTTCTCCTACAAACGCCTGCTAATTCAACACAAGCGAACGAAACACACGATGGTGGCGGGGATGAAGCGAGCTAAAATAAGCCTTAAAGATTGCTCAGTAAGGTGCCTGATCTGTGAAGAGGAGATGAAAGTCAGTGCCATTAATGAGCACAATCAGAAGCACATCTCGGTGAATATACGTCCGAGGAACATCTACACTTGCGCGGAGTGCGCTCAGAAGTTCAAGAGCTGCAGCAACCTGGCCAATCACATTAAACTGGTGCACAGGTTGAAACAACAAGAGGTGCCAAAGCAGTTTGCTGGCGTAGACATGGCGGATTTTTGTGAGGTCGTTGTGACAAAAGCGGAACCTCTGGATGAATCCCAGAGTCACAACGGCTTTGGAGAGGGTCCGCAGAATGCAGCGCCTATGGTAAACCTGACCGGATTCACTTGTCCTATTTGTGGGAAGAAGATGCCAACACTTGTGTCTCTCAAACGGCACGTGAACTGGCACTCCTTCATGGGGAACAACCTGGAGTCGAAGTATGAATGTTTCGTGTGTAAAGAGACATTCAAGTTCAAAGGTCACTTCAAGATCCACATGCGCCAGCACTACAAGGATCCTAACATCGACGCGTCCTTCCTCACGTGCGCCATCTGCCAGCGCCGCAGTAAGCACCTCCGCGCAGCGCAGGCGCACATGAACTGGCACAAGCAGACCCGCTTCCAGACCAAGGACTACCAGTGCTCTATTTGCAAGCGAGTCTTCCAGTACAGGAAGGTATATCTCTCCCACATGGCGGTCCATTACAAGAAGGGCGAGAGCGGACAGAACACGGTCGTAGGCGATATGGTCCCGAACAACCTCGATAAAGCCAAGTTCGATGGCACCTTCACCTGCCAGCTCTGCGGTAAGGTCTGCGACTCTGAAAACTCCTTAAAATGTCACACCACCTGGCACAGGTCCAAGACGCTGCTGTACGGAGCGCGCCACGAGTGCCAAATGTGCAATCTCCAGTTCACCAACAAGCGACATTTAGAGCTCCACACGCGCTCCCATTACGAGGACCCCAACGGTGAGTTCAAGTGCAATATATGCGGCAAGGGCTTCATAGACGAGGAGTACCACAGAAGACACGTCAAGGGACACAACTTTGATCACCAATCTCATAAGAAGCGAATAGAGAAGCTGAGGAAAGGGAAAGTGAAGTGTCCGATTTGCGACCGGTACTATCCGGATCTGGCGCACCTTATTCGCCATCTACGTCGCACGCACCCCGAGAGCAAGATGATCAAGGAGGACCCCGACGCGCCGCCGCCTAAGTACTATAGCTGCAAGCTCTGCGCCAAGTCCTTCTACAACGAGAAACGGTTCAAAAGTCACCAGGAGTCACATCTCCGCAAGCCCTGTTTTGTAAAGTGCAAGTTCTGCGGATACAAAAGTATATCGATGAAGAATCATCAACTACACATCAAACAGAAGCACATGACAAAGAAGTACGTAGAGAATCCGCTGAAGTGTCCGCGGTGTGACGAAGTTTTCGTGTGGGGCTACGCGTTGCACCACCATCTGCGCGACGAGCACGGCGTTCAGGAGGACTGGGTGGCGGAGCGTGATGACGCGGCGCTCGAAGGACCACTGAAAGACCTGCAGTGCTCCATTTGCCTCAAGGTCCTCGCCAGCAAGGGCAACTTTGAGCGACATCTCGATTACCACAACACTTTACGATGCAACTACTGCTTCGAGTACTTCAGCACGCTGCGTTTTCTCGAGGGACACCTCGCCTTCACTTGTGCCAAGAGAAACCTCGTCGGCTATTCTGATCCCTATCCTAAACGCGTCAAGTGCGAGATATGCTACAAGGCTTTCGCACTACAAGTAAAACTGGACTGTCACCTGCGGAGCCAGCATGCCATCAAGGTGCAACGCGACCCGCACGCCGGCAGGCAGGACCTCGTCTGCGACTACTGCTTCAAGGTGTTCGAGAACGAACATGCGCTCAGCGGGCACAAGATCTACCACCGCACCATCGGCTACTTCGGCTGCATCTACTGCGAGCGCAAGTTCAACACGCAGACCGCCTTCCGCAAGCACAAGAACCACCACTTCACTGTGCACAACGTCGAAGAACCCTTCAAATGCGAGCACTGCGACGAGACGTTTGTACAGTTCCGGGAGATGATCTACCACATGCGCGACGACCACGGCGACGACAAGGAATGGATCGTGATGCCCAAGGAGTCTATAGAGGAGACCTGCTCCATCTGCAATAAGATCTTCTTCAACATCCACCGGCACATGGACTACCACGAAGAGAACAAGTGCAAGAAGTGCCACGAGTACTTCTACTCCACCGTGGATTATGACAACCACCTGTGCGCGATAGAGAGCGACTCGGAGGAGGCGCCGGGCATCCCGCACTCTGACGTCCCCTACGAGGAATGCACCTTCTGCTTCAAGCCGATCACCAAGAAGGACTCTAAAAAGAAACACGACATGCTCCACCGCACCTCGGGAGCCATCTCCTGCAGGTTCTGCCATCTCAAGTTCAAGACGCTCGACGCTTTCAACATTCACGCATTTTCGCACCGCAGCCGCAAATATAACAAGAAGCCGCTGAAATGCCGCATCTGCAAGGAGCGCTTCATCAAGTACGGGCCGTTTATAAAACACATGAAGGTGGTTCACAAATGTGTTAAGAAGAGCCACTACCGCGCGCTGGTCAAACCCGAACGCTGCGTCATCTGCGGAGAGTCTCTACCCAATCTGCACAACCACTACCGCGCTCACCTTGTCAACCAGTGCCAGTTTTGCGACAAATACTTCACCTCCTCACGCCTCTTCGCGCGACACAAGTGCGATGTCATCGACGAGGACACTACCAAAGTCTTCACCTCCGACGAAAACATCCATGCGCTCATCAACTCTTACATCCCTAAAGACTTGAAAAACGATGAGAAGTTTTACGGCTACACTGACGATGAAGAGGAAGTCGTACCTGAAATTCCTCCGGCGGTCGACGTAGAGCAGCAGAATAAGGCTAAAAAGGCGATGAACGGGCCGACGAAACGCAAACCGAAGCCGAAGCGACTGACCCAGGAGGCGGAGTACGAGAGGGATCTCCACATGATGGTGCAGTCTCCGATCATATCGGATGTTCTGTCCCTTTACCAGAACGACGACGCTACTGGGGACGGTACTAGTAAAAGTACGCAGTTTTTGGGAGAGATTGTTTCCCTCACTGACGATGATTCTATGGACGTGAATGATATTGCACCTCCCATTGTCATTATAGACGATGATTAG
Protein Sequence: MALKLGKCRLCLKLGDFFSIFASDNDVQLSEMVMACSRIKVYDGDGLPDKVCSDCVQKLSSAYIFKQQCERSDQELRRNYIPPPGFSISPPPPTNRESSDSAFSTLTESSNLKSSFSENKVTPISRGRKRSVESDASIDSRSQERPGSSKRVEELKKAQKPKRPRYSADSDYEDNGASSIVNETDSDEPLLKNEHACPLCPKTFKWLKSMKIHMAHIHTGKKANSRAPEVNVNIPIKIANKKDQQKDEVTESDDEQIGCDKCGKKFKLKIMLKRHQETCQKSPAKLTSKSPMKELVITLEPIDAVPQLPKKPTCEYCTAQFKTVDNLEKHLRVVHAATRKKTNSETKQGGTLICLYCSKEFEDYYIYSSHFNGCPMKDNFSVYQCPMCPKSCSRLTAYVSHVRNAHGHYQRHSAGSAASASPKVEPELRLSGASPATGVFECRMCSKKLATQALLIAHLAAHMSNADEDDTIADDFDSRDDTVADDSMSVQSAQSSQPSQSGPMKCRYCDKEFTYKKSLASHELKHTEENVTVKHEPPDKASHADLLAEKHHVADTPNNQEYDSESSQDEGDEDNTCDICEKQFSYKRLLIQHKRTKHTMVAGMKRAKISLKDCSVRCLICEEEMKVSAINEHNQKHISVNIRPRNIYTCAECAQKFKSCSNLANHIKLVHRLKQQEVPKQFAGVDMADFCEVVVTKAEPLDESQSHNGFGEGPQNAAPMVNLTGFTCPICGKKMPTLVSLKRHVNWHSFMGNNLESKYECFVCKETFKFKGHFKIHMRQHYKDPNIDASFLTCAICQRRSKHLRAAQAHMNWHKQTRFQTKDYQCSICKRVFQYRKVYLSHMAVHYKKGESGQNTVVGDMVPNNLDKAKFDGTFTCQLCGKVCDSENSLKCHTTWHRSKTLLYGARHECQMCNLQFTNKRHLELHTRSHYEDPNGEFKCNICGKGFIDEEYHRRHVKGHNFDHQSHKKRIEKLRKGKVKCPICDRYYPDLAHLIRHLRRTHPESKMIKEDPDAPPPKYYSCKLCAKSFYNEKRFKSHQESHLRKPCFVKCKFCGYKSISMKNHQLHIKQKHMTKKYVENPLKCPRCDEVFVWGYALHHHLRDEHGVQEDWVAERDDAALEGPLKDLQCSICLKVLASKGNFERHLDYHNTLRCNYCFEYFSTLRFLEGHLAFTCAKRNLVGYSDPYPKRVKCEICYKAFALQVKLDCHLRSQHAIKVQRDPHAGRQDLVCDYCFKVFENEHALSGHKIYHRTIGYFGCIYCERKFNTQTAFRKHKNHHFTVHNVEEPFKCEHCDETFVQFREMIYHMRDDHGDDKEWIVMPKESIEETCSICNKIFFNIHRHMDYHEENKCKKCHEYFYSTVDYDNHLCAIESDSEEAPGIPHSDVPYEECTFCFKPITKKDSKKKHDMLHRTSGAISCRFCHLKFKTLDAFNIHAFSHRSRKYNKKPLKCRICKERFIKYGPFIKHMKVVHKCVKKSHYRALVKPERCVICGESLPNLHNHYRAHLVNQCQFCDKYFTSSRLFARHKCDVIDEDTTKVFTSDENIHALINSYIPKDLKNDEKFYGYTDDEEEVVPEIPPAVDVEQQNKAKKAMNGPTKRKPKPKRLTQEAEYERDLHMMVQSPIISDVLSLYQNDDATGDGTSKSTQFLGEIVSLTDDDSMDVNDIAPPIVIIDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01170802;
90% Identity: iTF_00698519;
80% Identity: -