Basic Information

Insect: Eupithecia abbreviata
Gene Symbol: Hr39
Assembly: GCA_943735975.1
Location: CALSER010000049.1:1134468-1151660[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.048 1e+03 -0.9 3.4 117 163 259 305 122 358 0.56

2 3 1.4e-08 0.0003 20.6 0.1 1 21 437 457 437 470 0.91

3 3 1.1e-64 2.2e-60 205.4 0.0 164 408 499 756 471 756 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.048	1e+03	-0.9	3.4	117	163	259	305	122	358	0.56
2	3	1.4e-08	0.0003	20.6	0.1	1	21	437	457	437	470	0.91
3	3	1.1e-64	2.2e-60	205.4	0.0	164	408	499	756	471	756	0.84

Sequence Information

Coding Sequence: ATGAACACCGCGATGTCAAGTGACGCTGACGCGGTGAAGGTAGAGGGGGGTCACGTGTCAGTCACCACGATCAGTATGTCCGGCCCGGAAACGAGCAATGGCCAATTCTCGTACAGCTCGAGTGGGGTCCGCATCAGCGTGTCTTCGGTTCCTCACGACGAAGACTCCACTGATGCTGAGATCTCCAAGATTGACTTCTCTCAACATCAGTACGAGGTCAATATGCGTAACAAGGCACTGTCTTCGGGCGGGCAGTACGAGGCGACCGATCGCGAACGACCCATGTCCTGGGAAGGAGAGCTGTCCGACTCGGAGATGGTTATCGATACCTCTGCCAATAACGACGAAACCTGCAACTCAACCGACCTCCAATCCTCCCGCGATTCCATCGACACCCTCCGCAACGTGGTCATCAAACAGGAACCGATGAAGAGTGAGGGCTTCCAGAGTCTCgatgaccagcgggtgctggacctgaagtacccgccgctgcagcagcatcagagaagccttagtatgaatagaATACCACAGTTGACCGACACCCCCCTATCTCTACCGCGAAGGCCGTCTTCTCCCACGAACTCCGCTAAATCCCTGGCGCTATCCGACCAGGGATCGATGCCCATGCCTCACACCACCATCGGGGAGATACAGAACCTTACCATCAAGAAAGAGATGCTATCAGAGTTGAAATGCGAACCGTCCTTAGGTATGGAGAAGCTTCTAGGCACAGCATTAGGCTCGCCACTCACAGGCAGAATGCAGCGCGTCCAATCCAGCGCCAGTACTGATTCCGCCGTACATTCCATGTACACACACAGTGTATACAGCAGTCCGTCCGCCAGCCCGCGCGCTAATCGTCACTACACGCCGTCTCTTTCTCGCAACAACAGCGACGCATCGCACTCTTCCTGTTACTCCTACAGCTCGGAGTTCTCGCCTACACACTCCCCGGTTCAGGGTCGTCACCCTCACGTGGTGTACAGAGAAGCCACCGCCGCGTTTCCGGCATCACCAGCTCATGATGAAGACGCCGAAACAGACGACAGACTGCATCATCATCAGGGCATCAGCAGACAACAGCTTATCAACAGCCCATGCCCGATATGCGGCGACAAAATCAGCGGCTTCCACTACGGGATCTTCTCCTGTGAATCCTGCAAGGGTTTCTTCAAGCGAACAGTCCAGAATCGGAAGAACTACATGTGCTTACGCGGAAGCAACTGTCCTGTTACCGTTGCTACTCGCAAGAAGTGTCCCGCTTGTCGGTTTGACAAGTGTCTGCAGTGTGGCATGAGGTTGGAAGCAATAAGAGAAGACAGAACGCGAGGAGGCAGATCAACCTACCAATGTTCGTACACACTATCAGGCGCGGCGTCAACCGGGTCTCTGCTTTCTGCGCACGTCCCAACCACACTACGGCACGCTTCAAGTCTCAACTGTGTTAACGGTCCAGGTTCATATAACAGCAGAGGGGAATCAAGCAATAGCCGACTAACTCCTGACATTCCACCATTATTGCAAGAAATAATGGACGTGGAACACCTATGGCAATACAACGAGTCAGAACTAAACCGGCTCGGCAAGTCCACCGGTGGGAGTCCCTCAGCCAATCCCTTGCTGGCCGCGAGTGGGATTACGGCACAGAACTCGAGTCCTGACTTCCTGGCAGACCTGTGCAATATAGCTGACCATAGGCTGTACAAGATTGTGAAGTGGTGCAAGAGTCTTCCCTTGTTCAAGAATATTTCGATAGACGATCAAATAAACTTGCTAATAAACAGTTGGTGCGAGCTCCTAGTGTTGTCATGCTGCTACCGCGGCGTCAGCACGCCGGGGGAGGTGCGCGTGGGCGGCGGACGCGGCATCACGCTGCAGCAGGCGGCCAAGCTGGGCTTGACGCCGTGCATAGAGCGTATGCTGAGTTTCACGGACCACTTGCGACGACTAAGAGTGGATAGATACGAGTACGTGGCTTTGAAAGTCATTGTACTTCTGACCTCAGACGCACCAGATCTTCGTGAATCAGAGAAGGTTAGAGCGTCCCAAGAGAAAGCGCTGGCCGCATTACAAGCATACATCGCCACGCACTCGCCGCAAACTCCGGCCAAGTTCGGAGAGTTGCTGCTGAGGATTCCTGAACTGCAGCGGACTTGCCAATTTTTCATGCAAGTCGGTAAAGAGATGCTGAATCCAGCAAATAAAAACAAAGATGGCGAGGGACCAAGCTTCAATCTACTCATGGAACTGTTGCGAGGGGACCATTGA
Protein Sequence: MNTAMSSDADAVKVEGGHVSVTTISMSGPETSNGQFSYSSSGVRISVSSVPHDEDSTDAEISKIDFSQHQYEVNMRNKALSSGGQYEATDRERPMSWEGELSDSEMVIDTSANNDETCNSTDLQSSRDSIDTLRNVVIKQEPMKSEGFQSLDDQRVLDLKYPPLQQHQRSLSMNRIPQLTDTPLSLPRRPSSPTNSAKSLALSDQGSMPMPHTTIGEIQNLTIKKEMLSELKCEPSLGMEKLLGTALGSPLTGRMQRVQSSASTDSAVHSMYTHSVYSSPSASPRANRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPHVVYREATAAFPASPAHDEDAETDDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGSNCPVTVATRKKCPACRFDKCLQCGMRLEAIREDRTRGGRSTYQCSYTLSGAASTGSLLSAHVPTTLRHASSLNCVNGPGSYNSRGESSNSRLTPDIPPLLQEIMDVEHLWQYNESELNRLGKSTGGSPSANPLLAASGITAQNSSPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQINLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLQQAAKLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPDLRESEKVRASQEKALAALQAYIATHSPQTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKNKDGEGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01161468;
90% Identity: iTF_00702959;
80% Identity: iTF_00698374;