Eabb002373.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupithecia abbreviata
Gene Symbol
sip1
Assembly
GCA_943735975.1
Location
CALSER010000015.1:114916-123852[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-61 1.2e-57 195.8 0.8 2 275 369 624 368 624 0.97

Sequence Information

Coding Sequence
ATGTCGGACGATGAGGTTATTCGCTTTGAGATCACCGATCATGATTTGGACAATGAATTTAACTTCAACAGACCCCGAGGGAAAAACAAAAAGGAGCATCAGATTTACGGCATGTGGGCCAAAGACAGTGATGAAGAAGACAATGAAGATAATGTCAGAAGAAGAACTCGGAAGCCAAAAGACTACTCGGCACCAATTGGTTTTGTTATGGGTGGCGTACAGCAGGCTGGCAAGAAGAAAGAAGAGAAAAAAGAGCTTGAATCAACCGAGGCTTCAACATCCCGCCCCAAGTTCGCTCCAGATAGTTCAGATGAAGAAGAATCTAGTTTACCAGCTGAGTCGGAGACCGCTGGCATCAGAAGGAAAGGACAGGGCATGAGGACGGCAAACCTTGGAGGGAATGTTGGGACTTGGGAGAAACATACTAAGGGTATTGGAGCTAAGCTTCTTTTGCAGATGGGCTACCAGCCCGGCAAAGGTCTGGGTAAAAGCCTGCAGGGTATATCAGCGCCGGTGGAAGCCACGGTCAGGAAGGGAAGAGGGGCAATCGGAGCCTATGGTCCTGAGAAATCTGCGCAAAAAGCCAAAAGAGAAGAGGAAAAGCGCTTGAAAGAGAAAGAGGAACAAGAGAAAGGAACAGCTGGGGAGAAGTCCTACAACTGGAAGAAATCGCACAAAGGCCGCTATTTCTATAAGGATGCGGCTGATCTGATACAAGAGGGTAAACCTACAATGCATACAATCGCCAGTTCGGAGCTATCTCGCGTGCCAGTAATCGACATGACCGGCAAAGAGAAGCGAGTACTAAGCGGTTACCACGCGCTGAGAGCGGCCGCACCTCGCTTCGAGCACGAGCCTCGCAGGAAATGTGAGAACTTTGCAGCGCCGGAGTTAGCGCACAACTTGACACTCGTGCTAGACTGCTGTGAACAGGACATAATCCAAAACGCACGAGAACTAAATGCAGCCGAAGACGAGATAGTGGTGTTAGAAAGAGACCTAAAAGAGTGTGATATCAACATGCAAGAGCAGGACGCAATCATTGCGAAGGTTCAAGCTATATTGACGCGAGTTTATGTGTTGAATAGATCGGATATATCGCTGGAAGCGGCTCATGAAGTTTTGGCTGAGTTACAGGAATCATACCCAACAGAATACGAGATGTTCGGCCTAGGCGGCATAGCGGGTAACATCGCCAGTCCACTCCTCAGCGCGCTGCTAGCGCCGTGGCAGCCATTGGAAACTCCTGAAGAACCCATACCTACCTTCCTCAAGTGGAGAAAACTGCTGACAGAAGAGGCTTACTCAAGCCTTCTGTGGCAGCACTTTATACCGCATCTTACTACGGCTTCAGAAGTATGGAACCCACGCATCCCCGACCCGATGCTCCGCGCAGTGAAGGCATGGAAAGACGCCTGTCCTGCCTGGATAGCAGGCGAGATGTTGACTCGCTGCGTGGTGCCGCGCGTGCTGGCTGCCGTGCGGAACTGGGACCCAACGAACGACACGCAGCCCGTGCACTGCTGGGTGCTGCCGTGGCACGAACTAGCAGGACCAGCTCTCTCAACCGGCATCTACCCCCTCATCCGGTCCCGCCTAGCGAGCGCCCTGTCCGCCTGGCACCCCGCGGACGGATCCGCGCGCGGCGTACTAGCGGCCTGGCAAGGCGCCTGGGGCGGAGCCCTAACGGCACTGTTACACCACCACATAGTACCCAAGCTGGAGCATTGTCTGCATCACTCGCAGATACAGTTGGTTGGCGGCGAGAACACTGCGTGGCTCTGGTGTGTGGAATGGCTGGAGCTACTCGGCGCGACCACCGTGGCTGCGTTAGCTGGCCGTGCGTTACTGCCGCGTTGGTTAGCGGCGTTAGCAGCATGGCTCAATGCTAACCCACCGCACGCGACCGTGCTTAACTCTTACACGGAGTTCAAGAAACTATTCCCCGAAGAAGTCCTGAAAGAGCCGGCAGTTCGCGACGCGTTCCGCAAAGCCCTAGACATGATGAACCGAAGCAGCGACATCGACTCCGTGGAAGCCCCGCCCCCGCCCCGCTTCACCCCCGTCGAGCCTCCGCCCCCGCCGCGATACACCCCAGTAGACCCCAAAGAATCTTCTAGAATAGCCGATGCTTTAGCCTCTACCCAACAGAAATCCTTCTCAGAACTTCTAGAATCAAGATGCATAGAGAAAGGTATCACCTTCGTGCCTATAGTGGGGAAGAATAGGGAAGGGAGGCCTATTTATAAGATAGGAGATAAACAGTGTTATGTTATAAGGAACGTTGTGATGTATTCGGATGATGGGAGGAATTTTGGACCTATTAGTATGGAGAGATTGTTGAGTTTGGTTGAGGAATAA
Protein Sequence
MSDDEVIRFEITDHDLDNEFNFNRPRGKNKKEHQIYGMWAKDSDEEDNEDNVRRRTRKPKDYSAPIGFVMGGVQQAGKKKEEKKELESTEASTSRPKFAPDSSDEEESSLPAESETAGIRRKGQGMRTANLGGNVGTWEKHTKGIGAKLLLQMGYQPGKGLGKSLQGISAPVEATVRKGRGAIGAYGPEKSAQKAKREEEKRLKEKEEQEKGTAGEKSYNWKKSHKGRYFYKDAADLIQEGKPTMHTIASSELSRVPVIDMTGKEKRVLSGYHALRAAAPRFEHEPRRKCENFAAPELAHNLTLVLDCCEQDIIQNARELNAAEDEIVVLERDLKECDINMQEQDAIIAKVQAILTRVYVLNRSDISLEAAHEVLAELQESYPTEYEMFGLGGIAGNIASPLLSALLAPWQPLETPEEPIPTFLKWRKLLTEEAYSSLLWQHFIPHLTTASEVWNPRIPDPMLRAVKAWKDACPAWIAGEMLTRCVVPRVLAAVRNWDPTNDTQPVHCWVLPWHELAGPALSTGIYPLIRSRLASALSAWHPADGSARGVLAAWQGAWGGALTALLHHHIVPKLEHCLHHSQIQLVGGENTAWLWCVEWLELLGATTVAALAGRALLPRWLAALAAWLNANPPHATVLNSYTEFKKLFPEEVLKEPAVRDAFRKALDMMNRSSDIDSVEAPPPPRFTPVEPPPPPRYTPVDPKESSRIADALASTQQKSFSELLESRCIEKGITFVPIVGKNREGRPIYKIGDKQCYVIRNVVMYSDDGRNFGPISMERLLSLVEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01170615;
90% Identity
iTF_00705028; iTF_00702917; iTF_00700138; iTF_00703982; iTF_00706031; iTF_00699184; iTF_00697363; iTF_00702005; iTF_00701082; iTF_00698332; iTF_00321611; iTF_01161389;
80% Identity
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