Eedi030836.1
Basic Information
- Insect
- Euphydryas editha
- Gene Symbol
- -
- Assembly
- GCA_036937285.1
- Location
- JAUPFZ010000023.1:13011090-13011413[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.8e-12 2e-09 38.3 0.1 2 39 14 51 13 56 0.90
Sequence Information
- Coding Sequence
- ATGGAGCCTTCTACTAAAAAACGGCGCGGGAAATGGACAAAAACACAGTTGAAATCCGCCTTTCAAGCAGTAAAAAGCTGCCAAATGTCACAGCGAAAAGCTGCTGAAACATATGGCATACCAAGGCGAACATTAAGAAACCACATCGAATCTGGCTCCATGGAGAAGATAACTGGTCGTGTCCCTATTCTTAATAAATCACAAGAAAGGCATTTATGCAAAAGGATAATTAGACTGTCTCAGATAGGAATGCCATTAACTCCAAAAATTGTTCGGAAGCAGGCCTACGAATTTCGTAGTTCCAACTACCTCTGGCTTAAATAA
- Protein Sequence
- MEPSTKKRRGKWTKTQLKSAFQAVKSCQMSQRKAAETYGIPRRTLRNHIESGSMEKITGRVPILNKSQERHLCKRIIRLSQIGMPLTPKIVRKQAYEFRSSNYLWLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00695405; iTF_00695406; iTF_00695407; iTF_00443897; iTF_00443880;
- 90% Identity
- iTF_00695406;
- 80% Identity
- -