Eedi022016.1
Basic Information
- Insect
- Euphydryas editha
- Gene Symbol
- -
- Assembly
- GCA_036937285.1
- Location
- JAUPFZ010000016.1:16427973-16429710[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-13 5.5e-11 43.3 0.1 1 39 31 69 31 74 0.93
Sequence Information
- Coding Sequence
- ATGTTCCGAGCTCTTACTTCGAGACGATGGTCGTTACGACGAGACAGTGAAAGATTAAAACCTTCTACTAAAAAACGGCGCGGGAAATGGACAGAAACACAGCTGAAATCCGCCCTTCAAGCAGTAAAAAGCTGCCAAATGTCACAGCGAAAAGCTGCTGAAACATATGACATACCAAGGCGAACATTAAGAAACCACATCGAATCTGGTTCCATGGAGAAGATAACTGGTCGTGTCCCTATTCTTAATAGATCACAAGAAAGGCATTTATGCAAAAGGATAATTAGACTGTCTCAGATAGGAATGCTATTAACTCCCAAAATTGTTCGGAAGCAGGCCTACGAATTTCGTAGTTCCAACTACCTCTGGCTTAAATAA
- Protein Sequence
- MFRALTSRRWSLRRDSERLKPSTKKRRGKWTETQLKSALQAVKSCQMSQRKAAETYDIPRRTLRNHIESGSMEKITGRVPILNRSQERHLCKRIIRLSQIGMLLTPKIVRKQAYEFRSSNYLWLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00695415;
- 90% Identity
- iTF_00695406;
- 80% Identity
- -