Basic Information

Insect: Eupeodes luniger
Gene Symbol: prg
Assembly: GCA_951509635.1
Location: OX608075.1:72176399-72180392[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.13 25 7.1 2.0 1 23 206 228 206 228 0.84

2 9 0.054 11 8.3 1.2 1 23 234 257 234 257 0.95

3 9 2.8e-06 0.00057 21.7 3.1 1 23 263 285 263 285 0.97

4 9 2.6e-09 5.2e-07 31.3 1.5 1 23 291 313 291 313 0.98

5 9 1.2e-06 0.00024 22.9 1.4 1 23 319 341 319 341 0.97

6 9 4.7e-05 0.0095 17.9 5.1 1 23 347 369 347 369 0.97

7 9 1.5e-05 0.003 19.4 3.5 1 23 454 476 454 476 0.95

8 9 3e-06 0.00061 21.6 2.9 1 23 481 504 481 504 0.97

9 9 0.00014 0.028 16.4 0.4 1 23 508 530 508 530 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.13	25	7.1	2.0	1	23	206	228	206	228	0.84
2	9	0.054	11	8.3	1.2	1	23	234	257	234	257	0.95
3	9	2.8e-06	0.00057	21.7	3.1	1	23	263	285	263	285	0.97
4	9	2.6e-09	5.2e-07	31.3	1.5	1	23	291	313	291	313	0.98
5	9	1.2e-06	0.00024	22.9	1.4	1	23	319	341	319	341	0.97
6	9	4.7e-05	0.0095	17.9	5.1	1	23	347	369	347	369	0.97
7	9	1.5e-05	0.003	19.4	3.5	1	23	454	476	454	476	0.95
8	9	3e-06	0.00061	21.6	2.9	1	23	481	504	481	504	0.97
9	9	0.00014	0.028	16.4	0.4	1	23	508	530	508	530	0.98

Sequence Information

Coding Sequence: ATGGAAGAAATTAATTTGTCCGAGGAGAATGTACAAACGTTGTGTAGACTCTGTTTAAAGACCGACGATTTTATTGTGGATATATTTCATGGATTGGATGGAAAATCTGATAAAGAGCCATTGCCCAAACGAATCTATGACCTTTACGCAGTAAAAGTTGAAGAAAGCGATGGGCTGccaaaaaacatttgtcatcgGTGTTTATATCTTACCGAATCCTTCACTTCCTTTCGATTAAGTGTAAAGCAATGCGAAGAACAATTAAAAGCTTATTCAGAATCTATGAAGGCCATAGCATGTGAGGCACAAAATGACATGCTAATTAAACAAGAAACCCTTGATAACCGTTACGAAGGATTAAATGGGTTCCATGGTTTTGTGCCAGATAAGAACTGTGAAATAACCGTTGTCGATCCGAATCAAGAATGTGAAAGTTCTGATGACTGTTTTTCAATGGAAGATTCCGACACTGATTTTCCAAGCCCTGCAAAGAAAGCCATCAATGGATTAGTTTCAAAACCAGAAACCGCAAATGAAATTCCATCGAAAACTGAAAATGTGACGCTGGCGGCTCCACAAAATTATAGCGATATCACAAATGAACCGAAAAATACTTTTCTTTGTCAGTATTGTGATATGGCTTTTACCACTCAAATGAACTGCGATGAACATGAATCACGTCATGATGCTGCAAATCCATTCATATGTAATTTCTGCCCGTTCAGAACTGTGAATAGACAAGTTCTTATTCATCACATCAAAGAGTCGCATGACAATGAACGCCCATTTGTTTGTACATTATGCAACAAAGGTTTTTGTCGTCGTTCGGACctgaaaaaacatacaattgtTCACACCGGAGTGCGACCATATTCTTGCCCAGTTTGCTCTAAAAGTTTTTCTCGCAATACAAATCTTACGAAGCACATGCGAATCCATAGTGGCATTAAACCACACGTATGTCAAAAGTGTCCCAGATCATTCACAACATATGCAGACCTCATTCGTCATCAGCGGGCTCATACGGAAATAAAACCGCATAAATGCACGAAATGCACCGCATCGTTTACCAGAAAAGATAAATTACAAAAGCATTATATTTCCCACTTGCGAAAGGAATCAGAGTCGGGTCTTTATGACAAGGAACGTCTTAAGCCACCACATGAAACCGATTCAAGTCAAATAATAGACAAGAGCCAGAAAAACCCACCCTTGGGTGTTGTAGATAATCAACCTCCTATGATGCCAATAAATAATTTCGGAAATAGTTTGTTAGCTGCTCAACTACAAAAACCACAGGCTAAAATGCAAATTCGAACAGGAACTAATCCATTTGAGGTTAAAACCAACGTAAAAGTACACATTTGCAACATATGTTCGAGAACTTTTACAAGAAAGAGAGAATTTCAACGTCATCAAGCCCTTCACTTGGACTGCTTATATAAATGCAAGCAATGCGACAAAAACTTCAATCGAAGAGATAAACTTATACGCCATGAGAAAATCTTTCACGCACCACAGTATAGCTGTAATCTGTGCAACATGAGTTACACCAAATTGGAAGCACTTCAGATGCATGTTAAAGTTCACGATTTGCACAACAATTTTTCATCGCAAGCTGAAGGCGGTGCTCCAcctcattttaataattttccaaaacaaaCTCCAATGGCTCTAGGTTTTtatagtgaaataaaaccagaaGAATGA
Protein Sequence: MEEINLSEENVQTLCRLCLKTDDFIVDIFHGLDGKSDKEPLPKRIYDLYAVKVEESDGLPKNICHRCLYLTESFTSFRLSVKQCEEQLKAYSESMKAIACEAQNDMLIKQETLDNRYEGLNGFHGFVPDKNCEITVVDPNQECESSDDCFSMEDSDTDFPSPAKKAINGLVSKPETANEIPSKTENVTLAAPQNYSDITNEPKNTFLCQYCDMAFTTQMNCDEHESRHDAANPFICNFCPFRTVNRQVLIHHIKESHDNERPFVCTLCNKGFCRRSDLKKHTIVHTGVRPYSCPVCSKSFSRNTNLTKHMRIHSGIKPHVCQKCPRSFTTYADLIRHQRAHTEIKPHKCTKCTASFTRKDKLQKHYISHLRKESESGLYDKERLKPPHETDSSQIIDKSQKNPPLGVVDNQPPMMPINNFGNSLLAAQLQKPQAKMQIRTGTNPFEVKTNVKVHICNICSRTFTRKREFQRHQALHLDCLYKCKQCDKNFNRRDKLIRHEKIFHAPQYSCNLCNMSYTKLEALQMHVKVHDLHNNFSSQAEGGAPPHFNNFPKQTPMALGFYSEIKPEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01396766;
90% Identity: iTF_00694046;
80% Identity: -