Basic Information

Insect: Eupeodes corollae
Gene Symbol: prg
Assembly: GCA_945859775.1
Location: CAMAOS010000096.1:1465167-1466978[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.11 14 7.2 2.1 1 23 176 198 176 198 0.84

2 9 0.047 6 8.3 1.2 1 23 204 227 204 227 0.95

3 9 2.5e-06 0.00032 21.8 3.1 1 23 233 255 233 255 0.97

4 9 2.2e-09 2.9e-07 31.4 1.5 1 23 261 283 261 283 0.98

5 9 1e-06 0.00013 23.0 1.4 1 23 289 311 289 311 0.97

6 9 4.1e-05 0.0053 18.0 5.1 1 23 317 339 317 339 0.97

7 9 1.3e-05 0.0017 19.5 3.5 1 23 424 446 424 446 0.95

8 9 2.6e-06 0.00034 21.7 2.9 1 23 451 474 451 474 0.97

9 9 0.00019 0.025 15.9 0.4 1 23 478 500 478 500 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.11	14	7.2	2.1	1	23	176	198	176	198	0.84
2	9	0.047	6	8.3	1.2	1	23	204	227	204	227	0.95
3	9	2.5e-06	0.00032	21.8	3.1	1	23	233	255	233	255	0.97
4	9	2.2e-09	2.9e-07	31.4	1.5	1	23	261	283	261	283	0.98
5	9	1e-06	0.00013	23.0	1.4	1	23	289	311	289	311	0.97
6	9	4.1e-05	0.0053	18.0	5.1	1	23	317	339	317	339	0.97
7	9	1.3e-05	0.0017	19.5	3.5	1	23	424	446	424	446	0.95
8	9	2.6e-06	0.00034	21.7	2.9	1	23	451	474	451	474	0.97
9	9	0.00019	0.025	15.9	0.4	1	23	478	500	478	500	0.98

Sequence Information

Coding Sequence: ATGGTTTCGTTGCTGAAGATAAGAAAAATATGTTTGCAAAACAAAAACTTGGCGAAGAAACAAGTTGAAGAAAGCGATGGGCTGCCAAAAAACATTTGTCATCGGTGTTTATATCTTACTGAATCCTTCACTTCCTTTCGATTAAATGTAAAGCAATGCGAAGAACAATTAAAAGCTTATTCAGAATCTATGAAGGCCATAGCAAGTGAGGCACAAAATGACATGCTGATTAAACAAGAAACCCTTGATAACCGTTACGAAGGGTTAAATGGGTTTCATGGCTTTGTGCCAGATAAGAACTGTGAAATAACCGTTGTCGACCCGAACCAAGAATGTGAAAGTTCTGATGATTGTTTTTCAATGGAAGATTCCGACATTGATTTTCCCAGTCCTGCAAAGAAAACCATCAACGGATTAGTTTCAAAACCAGAAACTGCAAATGAAATTCCATCGAAAACTGAAAATGTGCCGCTGGCAGCCGCTCCACAAAATTATAGCGATATCGCAAATGAACCGAAAAACACTTTTCTTTGTCAGTATTGTGATATGGCGTTTACCACTCAAATGAACTGCGATGAACATGAATCACGTCATGATGCAGCAAATCCATTCATATGTAATTTCTGCCCATTCAGAACTGTGAATAGACAAGTTCTCATCCATCACATAAAAGAGTCTCATGATAATGAACGCCCATTTGTTTGTACGTTATGCAACAAAGGTTTTTGTCGTCGGTCGGACCTGAAAAAACATACAATTGTTCACACCGGAGTGCGACCATATTCTTGTCCAGTCTGCTCTAAAAGCTTTTCTCGCAATACAAATCTTACGAAGCACATGCGAATCCATAGTGGCATTAAACCACACGTATGTCAAAAGTGTCCCAGATCATTCACAACATATGCAGACCTCATTCGTCATCAGCGGGCACATACGGAAATAAAACCGCATAAATGCACGAAATGCACCGCATCGTTCACAAGAAAAGATAAACTACAAAAGCATTATATTTCCCATTTGCGAAAGGAATCTGAATCGGGTCTTTATGACAAGGAACGTCTTAAGCCACCACAAGAAACCGATTCAAGCCAAATAATAGACAAGAGCCAGAAGAATCCACCCTTGGGTGTTGTAGATAATCAACCTCCTATGATGCCAATAAATAATTTCGGAAATAGTTTGTTAGCTGCTCAACTACAAAAACCACAGGCGAAAATGCAAATTCGAACAGGAACGAATCCATTTGAGGTTAAAACCAACGTAAAAGTACACATTTGCAACATATGTTCGAGAACTTTTACAAGAAAGAGAGAATTTCAACGCCATCAAGCCCTTCATTTGGATTGCTTGTATAAATGCAAGCAATGCGACAAGAACTTCAATCGAAGAGATAAACTTATACGCCATGAGAAAATCTTTCATGCACCACAGTATAACTGTAATCTGTGCAACATGAGTTACACCAAATTGGAAGCACTTCAGATGCATGTAAAAGTTCACGATTTGCACAACAATTTTTCATCGCAAGCTGAAGGCGGTGCTCCACCTCATTTTAATAATTATCCAAAACCAACTCCAATGGCTCTAGGTTTCTATAGTGAAATAAAACCAGAAGAATGA
Protein Sequence: MVSLLKIRKICLQNKNLAKKQVEESDGLPKNICHRCLYLTESFTSFRLNVKQCEEQLKAYSESMKAIASEAQNDMLIKQETLDNRYEGLNGFHGFVPDKNCEITVVDPNQECESSDDCFSMEDSDIDFPSPAKKTINGLVSKPETANEIPSKTENVPLAAAPQNYSDIANEPKNTFLCQYCDMAFTTQMNCDEHESRHDAANPFICNFCPFRTVNRQVLIHHIKESHDNERPFVCTLCNKGFCRRSDLKKHTIVHTGVRPYSCPVCSKSFSRNTNLTKHMRIHSGIKPHVCQKCPRSFTTYADLIRHQRAHTEIKPHKCTKCTASFTRKDKLQKHYISHLRKESESGLYDKERLKPPQETDSSQIIDKSQKNPPLGVVDNQPPMMPINNFGNSLLAAQLQKPQAKMQIRTGTNPFEVKTNVKVHICNICSRTFTRKREFQRHQALHLDCLYKCKQCDKNFNRRDKLIRHEKIFHAPQYNCNLCNMSYTKLEALQMHVKVHDLHNNFSSQAEGGAPPHFNNYPKPTPMALGFYSEIKPEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01396766;
90% Identity: iTF_01318458; iTF_00694900;
80% Identity: -