Elun037315.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupeodes luniger
Gene Symbol
-
Assembly
GCA_951509635.1
Location
OX608074.1:125459517-125485812[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.0022 0.45 12.6 0.2 1 23 142 165 142 165 0.97
2 26 1.3 2.6e+02 3.9 0.3 2 23 181 201 180 201 0.94
3 26 0.042 8.5 8.6 1.2 2 23 342 362 341 362 0.97
4 26 0.0018 0.36 12.9 1.9 1 23 368 391 368 391 0.95
5 26 3.8 7.6e+02 2.4 6.1 2 23 424 445 423 445 0.97
6 26 0.00032 0.063 15.3 0.6 1 23 451 473 451 473 0.95
7 26 4.8e-07 9.7e-05 24.1 1.3 3 23 485 505 484 505 0.97
8 26 6.2e-05 0.012 17.5 2.4 2 23 513 534 512 534 0.97
9 26 0.00069 0.14 14.2 0.6 2 23 540 561 539 561 0.92
10 26 0.00096 0.19 13.8 3.0 1 20 567 586 567 589 0.93
11 26 0.0017 0.35 13.0 0.6 2 23 595 616 594 616 0.91
12 26 7.5e-06 0.0015 20.4 0.3 1 23 621 644 621 644 0.98
13 26 0.1 21 7.4 0.2 8 23 697 712 696 712 0.97
14 26 0.013 2.5 10.2 0.3 1 23 719 741 719 741 0.97
15 26 6.8e-06 0.0014 20.5 0.2 1 23 748 770 748 770 0.98
16 26 0.00034 0.067 15.2 0.7 1 23 775 797 775 797 0.98
17 26 3.2e-07 6.3e-05 24.7 1.1 1 23 803 825 803 825 0.99
18 26 0.28 56 6.0 1.6 2 19 831 848 830 852 0.80
19 26 0.00021 0.042 15.8 2.2 1 23 857 880 857 880 0.96
20 26 0.04 8 8.7 1.0 8 23 922 937 921 937 0.96
21 26 0.0028 0.57 12.3 0.9 1 23 946 968 946 968 0.98
22 26 0.0015 0.31 13.1 0.1 1 23 975 997 975 997 0.98
23 26 6.8e-05 0.014 17.4 0.8 1 23 1002 1024 1002 1024 0.98
24 26 2e-06 0.00039 22.2 2.7 1 23 1030 1052 1030 1052 0.99
25 26 0.0039 0.78 11.8 0.3 2 23 1058 1079 1057 1079 0.95
26 26 0.00059 0.12 14.4 3.6 1 23 1084 1107 1084 1107 0.96

Sequence Information

Coding Sequence
atgttCGACTCGCTGCCCGTATGTCGAGTGTGCTTAAAAACATCACTTGAATACATCGACTTCGATACACCATTCGAGTTGGACGCTAGCATCAAGCCAATGGACAACGATCTAACATATCTCGATTGTTTTCAAGCTTGTACTCGTATTGAGATCGAATCCGACGAGAATTATCCCCAAAGTTTATGCAGTTCATGTGGTCTTGAACTGAAAATTGCCtatgaatttcttcaaaaagcCGAATCTGCAGATAAGACATTGCGTGAATTGTCTGCGGgtacaaaagttgaaaaatttgatGATGAAGAGATGAAATGTTTCCTTCAACCTGAAATGGTAACGTTAAATGATAATTTATCAACCGAAGAAACGCCCAATCAACATCCAAAACCAGCAGACAGTCATTTAGATGGAGaaaaaacctTTGTGTGTACAGTTTGTGGAGAACAATTCTTCTCACAAATGGTCCTTAACATACACGTCAATCGTTTGCATACAATAAATTTAACCGAGGATCAAAGCAACGCAGTCGAAAAAGTTGAATGCCAAATTTGTGAAATGATCTTGTCTATTGATAGCTTACACGACCATATGCAAATGCACGAAGAAGAATCAAACGttcaagaaaatgaaaatgaaaatgacgatgaaaatcatgaaaaaacaATGTATGAGGAAGTAATTATGGACGAAGAACCCTTAGATGTCGAATTTGAAATGCTGGATATGACCACTGTTTCGCAAGATGGTGAAGATATGAGAAATGTGCATGAATCTGAAGATGCAAATGATACTCAAGATGTAAATGACTTTGAAGATGCTAATGACTCTCAAGATGCAAATGACTCTCAAGATCCGAATGATTCACAAGATGTAACTGCCTCCGAAAACTATGAACCAGTTGATGAGGATGAAGAAGAGATTCTATCACAAATAAAACATGAAGCCGATTCAGATTTTCAAGTCATCGCTAAAATGATAACGGAACAAGAAAAACATAGAGCTAAAAAGGAGAAACACAAACAATGTGATATTTGCAAGAAACATGTCCGAGTAGCTTCTTTTACTGCCCATATGAATGTACATAATGgtGTTCGTCAATTTCCATGCGAGCATTGTTTTCAGGCTTACTTTTCAAATCGTTCATTACAAAAACACATTAACGCAAATCATTCAGATATATTGAATTCTCGTTGTCAAACATGTAATGAAACGGTTGAAGGTTCCGCTATGAAGGCTCACGTAGAAGAAAAACATTCGCATATTGTGAAATGCACGACGTGTGATCATGAATGCCAAGAGTCTAAAATGAAAGACCATATGAAGAGAAAGCATTCAGAATCCAAAGACTTTTTATGCAATGTTTGttCCAAAACATTTAGTACGCTTGGCATACTCAATGCCCATATGAAATATCACGACAAAAAAGAAGCCATTGCTAAATCGGAGGCATGTGATATGTGTGGCAAAGTATTCTCATCGAATCATTACCTTAAAAAGCATATGCTAATACATCAGGAGGAACGCGCTCTATTACAATGTACTTATTGTGATAGAACCTATCATTCAAAAAATTCCCTAGAGAACCATGTGCGAATTCATACGGGTGACACAATAAAATGCATTATGTGTTCCAAAGAATTCGGCCGACAATACGAATTGAATGTGCACATGCGATTTCACACAAAAGAATATCCATTCGAATGTGAATTATGCCACAAAAAGTTCGCCATTAAAGGTCACCTGCGAACGCATATGTGGCGTCATCAAGGTCTCAAGTTGCAGTGTGAAGAGTGTGGAAAACTATTTACATCCACAAAAGCGTTGCAAGAACATTCCTTCTATCATTCTGAGATGCCTTTTCAATGTCCGTACTGTCCAAAAGCCTATCCTTCGAAACCGaaATTCAAAGTTCATTTGAAAACTGCTCACATGGTGGAATTCTCGAATGAGGAATTACAAAAAATGGGCAAATTCACAGTACCAAAAAGACCTAGATCCAGAAAGTTTACCTTAGTTCAGGCTGACACGGTCATTAAAGAAGTTGAAGTTCATACGAAAATTGAATGCATTCTTTTTGTTTCAGCTAAATCTTTCACTCGCTTGGCTACATTAAAGGATCACTTGAAAATTCACGAAGGTATCACTGAGTCCTATCCTTGTGAAATTTGCGGCAAAATATCCCCTTCCCGCCAATGTGCTAAGATTCACAGAAACATACATGATGAATCGCGTCCCACATATCCATGTGTCGATTGTGGCAAGATATTTGTAACAACTTCATCGCTAAGCTCCCATCGAAGGTGGCATACAGGAAAGGCCTTTAAGTGTGCCCAATGTCCAAAGATGTTTGTTCTTGAATCTGAATATAAAATTCATCTGAGATTTCATACGCACGATTATCCATATCAATGCGAAATGTGTGGCAAGAATTTCAATGTCAAAGGTCATTTAAATGCGCACATCAAAATGCATTTGGGTTGGAAGATTAAATGCAAAGTGTGTGGAAAACTTTTTGCAACCAGGGCAGCATACTCCTGTCATGCATTCAAACACGGTGTAATGCCTTATAAATGTTTACATTGTCCAAAAGGTTACCCTAAGAAATCAAAactaAGAGATCATCTCAAAGCAACTCATTCAATGGATATGACTATggacgaaataaataaaatatatattagaGAACCAACTGTTAGAAAGAGGGAAAAAGTAGAATGGATCAAAGTTGATTctaataataaagaaattatCGTTTCAAcTAAAACTTTCACTCGCATATCGACTCTAAAGGAACACTTAAAAACCCATGAAAATGATGGTCAAAACGAAACCTACACCTGTGATATTTGCGGTAAAGTTTCTCCTTCGCGGCAATGTGCAAGGATTCACAGAAAAATACACGACGAAAGTCGTCGCACGTATCCTTGCTCGGATTGTGGCAAAATATACCTTTCATCGTCTTCGCTAGGCTTACACCGGAGATGGCATACAGGAAAAGCATTTCAATGTGTACAATGTCCAAAGATGTTCGTTACCAAACCTGAATATAAAATTCACCTGCGATTTCATACGCGTGATTATCCATATCAATGTGAAATGTGTGACAAGAAATTCAATGCCAAAGGTCATCTAAATAGCCACATGAAAATGCATTTAGGCTGGAAGATCAAATGCAAAGAATGTGGCAAGCTCTTTGCCACACGACCCGCTTACTCCGACCATGTGTTTAAACATAGTGAAATGCCCTATAAGTGTTTACATTGTACAAAAGGATACCCTACAAAATCAAAactaAGATATCACCTTAAAGCAACGCATTCAATAGATATGACTATGGACGAATTAAGGAGTATATATGTTAAAAAACCAACAGCTACGAAAAGAGAAAAAGTGGAATGGATAAAAGTTGAAAGTTGA
Protein Sequence
MFDSLPVCRVCLKTSLEYIDFDTPFELDASIKPMDNDLTYLDCFQACTRIEIESDENYPQSLCSSCGLELKIAYEFLQKAESADKTLRELSAGTKVEKFDDEEMKCFLQPEMVTLNDNLSTEETPNQHPKPADSHLDGEKTFVCTVCGEQFFSQMVLNIHVNRLHTINLTEDQSNAVEKVECQICEMILSIDSLHDHMQMHEEESNVQENENENDDENHEKTMYEEVIMDEEPLDVEFEMLDMTTVSQDGEDMRNVHESEDANDTQDVNDFEDANDSQDANDSQDPNDSQDVTASENYEPVDEDEEEILSQIKHEADSDFQVIAKMITEQEKHRAKKEKHKQCDICKKHVRVASFTAHMNVHNGVRQFPCEHCFQAYFSNRSLQKHINANHSDILNSRCQTCNETVEGSAMKAHVEEKHSHIVKCTTCDHECQESKMKDHMKRKHSESKDFLCNVCSKTFSTLGILNAHMKYHDKKEAIAKSEACDMCGKVFSSNHYLKKHMLIHQEERALLQCTYCDRTYHSKNSLENHVRIHTGDTIKCIMCSKEFGRQYELNVHMRFHTKEYPFECELCHKKFAIKGHLRTHMWRHQGLKLQCEECGKLFTSTKALQEHSFYHSEMPFQCPYCPKAYPSKPKFKVHLKTAHMVEFSNEELQKMGKFTVPKRPRSRKFTLVQADTVIKEVEVHTKIECILFVSAKSFTRLATLKDHLKIHEGITESYPCEICGKISPSRQCAKIHRNIHDESRPTYPCVDCGKIFVTTSSLSSHRRWHTGKAFKCAQCPKMFVLESEYKIHLRFHTHDYPYQCEMCGKNFNVKGHLNAHIKMHLGWKIKCKVCGKLFATRAAYSCHAFKHGVMPYKCLHCPKGYPKKSKLRDHLKATHSMDMTMDEINKIYIREPTVRKREKVEWIKVDSNNKEIIVSTKTFTRISTLKEHLKTHENDGQNETYTCDICGKVSPSRQCARIHRKIHDESRRTYPCSDCGKIYLSSSSLGLHRRWHTGKAFQCVQCPKMFVTKPEYKIHLRFHTRDYPYQCEMCDKKFNAKGHLNSHMKMHLGWKIKCKECGKLFATRPAYSDHVFKHSEMPYKCLHCTKGYPTKSKLRYHLKATHSIDMTMDELRSIYVKKPTATKREKVEWIKVES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01318421;
90% Identity
-
80% Identity
-