Elun034496.1
Basic Information
- Insect
- Eupeodes luniger
- Gene Symbol
- -
- Assembly
- GCA_951509635.1
- Location
- OX608074.1:79091256-79092341[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-12 8.7e-10 39.7 0.0 2 38 101 138 100 144 0.92 2 2 3.2e-11 2.6e-08 35.0 0.1 7 39 216 248 213 252 0.93
Sequence Information
- Coding Sequence
- ATGGCTGTTTGCTCAGGAAATGATCAATATATTATATACGAATTAAAAACCATTCGTCAACCGAGTTGTAGCTATATTGTCACAAATCCTATAGAGCCACCACTTCCTCACTGTGTTCGGAAAACAGATGATACAACTTGTGATAGCATCGTTTCCACTGTTACCCAAGTAATAGCTACTCCAGGACCATACACAATCAGTGTTGAAATACCTGTTGAAAATAATGAGGTAGTTGATAAATGTAAGGAGAACAGTCCCAAAACAAAGCGTGCTCTAGCCAAAACAAAGCGTCTCTTAGCACGTGAAAGACTCGATGAAGCTGTTGCAGCCGTGATCACTGAAGAAATGACCATTGGTAAAGCTGCAAAAGAATTCGAAGTGACAAAGAGTACTTTATGGaaagaagttaataaatacaGTGACCAGCGAAAAAAGAAAGTCAACGAAGATCTCAATAAAAAGATTGTTGATCGGATTTGTGCAGGCGAATCTCTTTCAGAAATTTCAAGGTCCTTAAAGGTTTCCAAATCTACAGTACACCTACATAAAGTTCGACTAGCCCAAGCTGGAAAACTGCCATCGAGTGTTACTTTCAAGCCCCCTGTTGACAAAGTGGAACAACTTGCTATTAAAAATCGTGTAATTCGGGCTTTTCGTGCTGTTCGAGTGAATGGCATGTCGTTGCGTTTAGCTTCCAATTACTTTTCGGTGCCACGATCGACGCTGTGGAAACACATCCGCAGATGCAAAGCTaatcaaaagaaacaagaaaaggCACAGCATTGCAATGATCCTGAAAAGTCTTTAAACGACAGAGTCAAGAAAATAGACTTGGAGGAAACAAGTGAAGTTGATTCATCAGATGAAAACAGTTCAAATGAAGCGGAAAATGATGAAGATGTTTCTGTAACAGGGGAAAATACTTCGGACGTACAGTCTACAACAACTACAGATGATATTCAAGATGACTTTgatttattggatttttattgtGAGCAAAACAATCCAAGTGAAGAAGGAGactttttaataagttttgattttgaaacttttgaAGACTTTGTTAAGACTGATCTTAAAAGataa
- Protein Sequence
- MAVCSGNDQYIIYELKTIRQPSCSYIVTNPIEPPLPHCVRKTDDTTCDSIVSTVTQVIATPGPYTISVEIPVENNEVVDKCKENSPKTKRALAKTKRLLARERLDEAVAAVITEEMTIGKAAKEFEVTKSTLWKEVNKYSDQRKKKVNEDLNKKIVDRICAGESLSEISRSLKVSKSTVHLHKVRLAQAGKLPSSVTFKPPVDKVEQLAIKNRVIRAFRAVRVNGMSLRLASNYFSVPRSTLWKHIRRCKANQKKQEKAQHCNDPEKSLNDRVKKIDLEETSEVDSSDENSSNEAENDEDVSVTGENTSDVQSTTTTDDIQDDFDLLDFYCEQNNPSEEGDFLISFDFETFEDFVKTDLKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00693684;
- 90% Identity
- -
- 80% Identity
- -