Ecor009722.1
Basic Information
- Insect
- Eupeodes corollae
- Gene Symbol
- -
- Assembly
- GCA_945859775.1
- Location
- CAMAOS010000108.1:3292638-3298668[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-12 1.9e-09 37.9 0.0 2 38 131 168 130 174 0.92 2 2 9.5e-12 4e-09 36.9 0.1 4 39 243 278 241 281 0.94
Sequence Information
- Coding Sequence
- ATGTGGGACGAACCGAAATTCATCGAAGTGTCTGAATCAGAAGAAGATTGCGTGTTACCGAAAGACCCGGATCCACTACTTCAGCCAGTTCTGGCCGTTTGCTCAGAAAATGATCAGTATATTTTATATGAATTAAAAACCATTCGTCAACCGAGTTGTAGCTTTATTGTCACGAATCCTATACAGCTACCACTTCCTCAATGTGCTCGTCAAATAGATGTTCCAACTTGTGATAGCATCGTTTCCACCGTTACCCAAGTAATAGCTACTCCGGGACCATACACAATAAGTGTTGAAATACCTGTTGAAACTGATCAGATGGTTAATAAATGTAAGGAGAACAGCCCCAAAACAAAGCGTGCTCTAGCCAAAACAAAGCGTGCCTTAGCACGTGAAAGACTCGATGATGCTGTAGCAGCCGTGATCAATGAAGAAATGACCATTGGTAAAGCTGCAAAAGAATTCGAAGTGACAAAGAGTACTTTATGGAAAGAAGTTAATAAATACAGCGACCAGCGAAAAAAGAAAGTCAACGAAGATCTCAATAAAAAGATTGTTGATCGCATTTGTGCGGGCGAATCTCTTTCAGAAATTTCAAGATCGTTAAAGGTTTCCAAATCTACAGTACACCTACATAAAGTTCGACTAGCCCAAGCTGGAAAACTGCCATCGAGTGTTAGTTTCAAGCCCCCTGTTGACAAAGTGGAACAACTTGAGATTAAAAATCGTCTAATTCGGGCTTTTCGTGCTGTCCGAGTGAATGGCATGTCGTTGCGTTTAGCTTCCAGTTACTTTTCAGTGCCACGATCGACGCTGTGGAAACACATCCGCAGGTGCAAAGCCAATCAAAAGAATCAAGAAAAAGCACAGCTTGGCAATGATCCTGAAAAATCTATGAACGATAGTCTTAAGAAAATGGACTTAAAGGAATCAAGTGAAAATGAGGTTGATTCATCAGATGAAAACAGTTCAAATGAAGTGGAAAATGATGAGGATGTTTGTGTAACAGGTGAAAATACTTCGGATGTCCAATCTACAACAACTGCAGATGATTTTCAAGATGACTTTGATTTATTGGATTTTTACTGCGAGCAAAACAATCCAAGTGAAGAAGGAGACTTTTTAATAAGTTTTGATTTTGAAACTTTTGAAGACTATGTTAAGACTGATCTTAAAAGATAA
- Protein Sequence
- MWDEPKFIEVSESEEDCVLPKDPDPLLQPVLAVCSENDQYILYELKTIRQPSCSFIVTNPIQLPLPQCARQIDVPTCDSIVSTVTQVIATPGPYTISVEIPVETDQMVNKCKENSPKTKRALAKTKRALARERLDDAVAAVINEEMTIGKAAKEFEVTKSTLWKEVNKYSDQRKKKVNEDLNKKIVDRICAGESLSEISRSLKVSKSTVHLHKVRLAQAGKLPSSVSFKPPVDKVEQLEIKNRLIRAFRAVRVNGMSLRLASSYFSVPRSTLWKHIRRCKANQKNQEKAQLGNDPEKSMNDSLKKMDLKESSENEVDSSDENSSNEVENDEDVCVTGENTSDVQSTTTADDFQDDFDLLDFYCEQNNPSEEGDFLISFDFETFEDYVKTDLKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00694508;
- 90% Identity
- -
- 80% Identity
- -