Basic Information

Gene Symbol
kn_1
Assembly
GCA_951509635.1
Location
OX608075.1:62289425-62292620[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7e-119 4.9e-115 386.6 0.0 205 385 1 210 1 214 0.99
2 2 7e-12 1.3e-07 31.9 12.6 422 514 213 308 209 342 0.79

Sequence Information

Coding Sequence
ATGAGAAGATTTCagGTTGTTATCTCAACACAAGTTACAGTTGATGGACCACTCTTAGCCATTTCTGATAACATGTTTGTGCACAATAATTCCAAACATGGCCGTCGAGCAAAGCGGATGGATGCCACGGAAGGTACAGGAAACCCTCCCCTGTCCATTTCGGGTCATCCCCTTGCACCTGACAGTACCTACGATGGACTCTACCCACCTCTCCCTGTTGCAACACCTTGTATAAAAGCAATATCGCCCAGTGAAGGCTGGACCACTGGAGGAGCGACTGTTATCATTGTTGGTGATAATTTCTTTGATGGCCTTCAAGTTGTTTTTGGAACTATGCTTGTTTGGAGTGAACTGATAACATCACATGCTATTCGAGTTCAGACTCCACCACGACATATACCGGGTGTTGTAGAAGTAACACTTTCGTacaaaagcaaacaattttGCAAAGGTTCCCCTGGAAGATTTGTCTATGTttCAGCACTCAATGAACCAACAATAGACTATGGATTTCAGCGCTTGCAAAAGCTTATTCCCCGCCACCCTGGAGATCCAGAAAAACTTCAAAAGGAAATTATCCTTAAACGTGCCGCTGATTTAGTTGAAGCCCTTTATTCAATGCCTAGATCTCCCGGAGGTACAACAGGATTCAATTCATACGCAGGCCAATTAGCAGTTAGTGTTCAGGACGGAACTGGCCAATGGACCGAAGATGAATACCAACGAGCTCAAAGTAGCAGTGTGAGTCCTCGAGGAGGCTATTGTAGCAGCACGTCAACGCCACACTCATCAGGAGGTGGGTCGTACGGGGCCACTGCTAACGGTTATGGACCAGCACCAAACATGGGAGCATTGTCATCGTCACCTGGGAGTGTGTTCAATTCTACATCCACTAGTGCCTTTTCGCCATTAATTTCAACAGTGACATCCCCGTGGCACCAAGCTCTTGCAcaacaccatcaccatcatcactcACATCCGCATCATCACCATCTTTCGCATCATCCACATCAGCTTTGGCATAATCCTACAACGGTGTCTGCAACAGCAGCCGTTTAG
Protein Sequence
MRRFQVVISTQVTVDGPLLAISDNMFVHNNSKHGRRAKRMDATEGTGNPPLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGTTGFNSYAGQLAVSVQDGTGQWTEDEYQRAQSSSVSPRGGYCSSTSTPHSSGGGSYGATANGYGPAPNMGALSSSPGSVFNSTSTSAFSPLISTVTSPWHQALAQHHHHHHSHPHHHHLSHHPHQLWHNPTTVSATAAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01116233;
90% Identity
iTF_00893648;
80% Identity
iTF_00664643; iTF_00893648;