Basic Information

Gene Symbol
kn
Assembly
GCA_947049305.1
Location
CAMRIP010000104.1:686859-696256[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7e-119 2.9e-115 386.6 0.0 205 385 1 210 1 214 0.99
2 2 7e-12 7.5e-08 31.9 12.6 422 514 213 308 209 342 0.79

Sequence Information

Coding Sequence
ATGAGAAGATTTCAGgTTGTTATCTCAACGCAAGTGACAGTTGATGGACCACTATTAGCCATTTCTGATAACATGTTTGTGCACAATAATTCTAAGCATGGCCGTCGAGCAAAGCGGATGGACGCCACGGAAGGTACAGGAAATCCCCCACTGTCCATTTCGGGTCACCCCCTTGCACCTGACAGTACCTACGATGGACTCTATCCCCCGCTACCTGTTGCAACACCTTGCATAAAAGCCATATCGCCCAGTGAAGGTTGGACCACTGGAGGAGCCACCGTCATTATTGTTGGTGACAATTTCTTTGATGGTCTTCAAGTCGTTTTTGGAACCATGTTAGTCTGGAGTGAATTGATAACATCACATGCAATACGAGTTCAAACTCCACCGCGGCACATACCAGGTGTTGTAGAAGTAACACTTTCATACAAAAGCAAGCAATTTTGCAAAGGCTCCCCAGGAAGATTTGTCTATGTCTCAGCACTCAATGAACCAACAATAGACTACGGCTTTCAGCGTTTGCAAAAGCTCATTCCCCGCCACCCAGGTGATCcagaaaaactacaaaaagaaataatccTTAAACGTGCCGCCGATTTAGTTGAAGCTCTTTATTCAATGCCGAGATCTCCCGGAGGAACAACAGGATTCAATTCATACGCAGGTCAATTAGCCGTCAGTGTCCAGGACGGTACTGGCCAATGGACCGAAGATGAATACCAACGAGCGCAAAGTAGCAGTGTGAGTCCTCGTGGAGGTTATTGTAGCAGCACATCAACGCCGCACTCGTCAGGAGGTGGATCCTACGGGGCAACTGCTAACGGTTATGGACCAGCACCAAACATGGGAGCATTGTCATCGTCACCTGGGAGTGTGTTTAATTCTACATCCACTAGTGCCTTTTCGCCATTAATTTCAACAGTGACATCCCCGTGGCATCAAGCTCTTGCACaacatcatcaccatcatcactCACATCCGCATCATCACCATCTTTCACATCACCCACATCAGCTTTGGCATAATCCAACAACGGTGTCTGCAACAGCAGCCGTTTAG
Protein Sequence
MRRFQVVISTQVTVDGPLLAISDNMFVHNNSKHGRRAKRMDATEGTGNPPLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGTTGFNSYAGQLAVSVQDGTGQWTEDEYQRAQSSSVSPRGGYCSSTSTPHSSGGGSYGATANGYGPAPNMGALSSSPGSVFNSTSTSAFSPLISTVTSPWHQALAQHHHHHHSHPHHHHLSHHPHQLWHNPTTVSATAAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01116233;
90% Identity
iTF_00893648;
80% Identity
iTF_00694380;