Basic Information

Insect: Eupeodes corollae
Gene Symbol: wdn
Assembly: GCA_945859775.1
Location: CAMAOS010000452.1:1357665-1364707[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.18 24 6.5 0.7 1 23 204 226 204 226 0.96

2 8 6.8e-07 8.8e-05 23.6 0.7 1 23 230 252 230 252 0.98

3 8 0.039 5.1 8.6 1.8 2 23 263 283 262 283 0.93

4 8 1.8e-06 0.00023 22.3 1.0 3 23 291 311 289 311 0.98

5 8 7.1e-06 0.00091 20.4 3.0 1 23 317 339 317 339 0.98

6 8 0.00021 0.027 15.7 3.2 1 23 345 367 345 367 0.96

7 8 8.3e-06 0.0011 20.2 1.1 1 23 373 395 373 395 0.96

8 8 0.00025 0.033 15.5 3.3 1 23 401 424 401 424 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.18	24	6.5	0.7	1	23	204	226	204	226	0.96
2	8	6.8e-07	8.8e-05	23.6	0.7	1	23	230	252	230	252	0.98
3	8	0.039	5.1	8.6	1.8	2	23	263	283	262	283	0.93
4	8	1.8e-06	0.00023	22.3	1.0	3	23	291	311	289	311	0.98
5	8	7.1e-06	0.00091	20.4	3.0	1	23	317	339	317	339	0.98
6	8	0.00021	0.027	15.7	3.2	1	23	345	367	345	367	0.96
7	8	8.3e-06	0.0011	20.2	1.1	1	23	373	395	373	395	0.96
8	8	0.00025	0.033	15.5	3.3	1	23	401	424	401	424	0.98

Sequence Information

Coding Sequence: ATGAAGGAAGAGGGCCTCCTCAACAAATCGACGTCCTCCTTCGCCAACAACGATGAGATTCTAACGTCGCTTCTGAAGATCAATAACTTTGATAATAGCATCAAAGATGAGTCGCTGGACATCAATCTCTCGGCCTGTGTAACTATATCCGCCGACCCGACAATCATCTGCAACAACAGTCTGTCCTCGGACTTCTGGAAGGTCTTCGATGAGAGCGCCCAGGCCGACGAGAGCAGCAGTGCTATTGCAAATCGATCGGCACCGGTGGCGGAGAACATCAGTTTCGTAAGCCTTCTGCCTCCACCGCCACCTGCAGAAGCACACAAAGCTCTCACCGGATGGGGGAGTGATTTACCTTCTCCGATCTTACCGTCTTCCACAAAGAAGAAGCAAAAAAGCCGCAAACAAACTAAGCCCACCCAAATTACCGATGAGGGTAGTAATGTTAATGTAGAACGCAAGCCCGACATCAATGCACTAGCACCAGCACCACCGACAAAGACACCGACTACAAAAAATAATGTCCACCTTCCGATCTCAAATAGTTTTAAGGGTAATTTTCCGATTGCTGCAAGTAATCCAGATTCTACGCCAGCAATCGCTTTCAAATTCAAATGCGAACATTGTCGAGTAGTGTTGAACGGGCTGGAGGAGTTCAGCAAGCACGAAGCCTCCCATAAGATTCTATTTAAATGCAACGAATGTGATCGTGAGTTTGCCAACGAGAGTGGCTTGAAGAAGCACGTTAAGAGTCATCGAGATGACTCGAGGAAGGACGGCTGGAAGAAGTGCCCTGATTGTGGCAAGTGTTTAAAACTCGGAAGCATGTGGATGCACAGAAAAATCCACAGTGATAATAAAAAATACGGCTGTGATATATGTGGCCAAAAATTTGTTCAAAAAATTAATCTTACCCATCATCAGAGAGTGCACACAGCAGAAAAGCCCTACGAATGCGCTGAATGTCCAAAACGATTTCAAGAAAGATCTCATTTGCAACGTCATCAAAAATATCATGCCCAAACCCGTCCGTTTCGATGTGAGAAATGTGGTAAAATGTACAAAACCGAACGTTGCCTCAAAGTCCATAATCTTGTGCATCTGGAACAGCGTCCCTTTGCATGTCAGGTGTGCAACAAAAGTTTCATAAGCAACTCAAAGTTGAAGCAGCACTCAAATATTCACACTGGCGAACGTCCGTTCAAGTGTAACTACTGCACCAGGGACTTTACGAATTTCCCCAATTGGCTGAAGCACACCCGCAGACGTCACAAAGTCGATCATAAGACCGGAGAACTCCTCGAGCACATGCCTTCGTATTGTACAAAATCAGGCAAGAAGTCTACAGCAGCTGCGGCTGGAGGTGATGCTGAGGGAAAACCAACGAGGAAGAAGAAGAAAACCGAGACGGATCAGAAGAAAAACATAACTACTACATCACAGCCACAATCAAAACCACAACAACCACCACCGCTATCGCTACCGATACCACAACCGGTAGCTCAACCAAAGTCTTCCCAGTCTCCAACAACTCCCTCCGTCCAGCTTATGAAAACCAAAATTAAACTGGAACCCAAACAGGAACCACCGGAAGTTTACTCCAATAGCAACTTCACGGATTTGCACTCTCTGAGCATAACCAGTGCCGAGGAATTGATCATGGAACAAGCCCTCGAAATGGAAGAATTTTGTTTCTACAAATCGCAGCTGGATCAGTTCTGTATGCAGAAGGAATTTACTGTAAAAAAAGAATTTGATAATAAAGCATTGTGCTCTGTTGACTCCTCGCCGTTTTCTTCGCCAGCTTCTGTCGAGCTTCCCATCACGTACAACATCCAGTCTCTTCCATCCACAACAATATCGACTGCAGGACGGAATGCATCATCGTTGTCGTCCGAATCTGCAACATCAAACACAATGCGCATCCAAGTTTTCAAGAATCAAACTCTTCCGTCCGTCGACACTTTGATAAATGCTTGCTTTTTCAAAACCGAGAATCAAAATATGTAA
Protein Sequence: MKEEGLLNKSTSSFANNDEILTSLLKINNFDNSIKDESLDINLSACVTISADPTIICNNSLSSDFWKVFDESAQADESSSAIANRSAPVAENISFVSLLPPPPPAEAHKALTGWGSDLPSPILPSSTKKKQKSRKQTKPTQITDEGSNVNVERKPDINALAPAPPTKTPTTKNNVHLPISNSFKGNFPIAASNPDSTPAIAFKFKCEHCRVVLNGLEEFSKHEASHKILFKCNECDREFANESGLKKHVKSHRDDSRKDGWKKCPDCGKCLKLGSMWMHRKIHSDNKKYGCDICGQKFVQKINLTHHQRVHTAEKPYECAECPKRFQERSHLQRHQKYHAQTRPFRCEKCGKMYKTERCLKVHNLVHLEQRPFACQVCNKSFISNSKLKQHSNIHTGERPFKCNYCTRDFTNFPNWLKHTRRRHKVDHKTGELLEHMPSYCTKSGKKSTAAAAGGDAEGKPTRKKKKTETDQKKNITTTSQPQSKPQQPPPLSLPIPQPVAQPKSSQSPTTPSVQLMKTKIKLEPKQEPPEVYSNSNFTDLHSLSITSAEELIMEQALEMEEFCFYKSQLDQFCMQKEFTVKKEFDNKALCSVDSSPFSSPASVELPITYNIQSLPSTTISTAGRNASSLSSESATSNTMRIQVFKNQTLPSVDTLINACFFKTENQNM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00975035;
90% Identity: iTF_00694934;
80% Identity: -