Basic Information

Insect: Eupeodes corollae
Gene Symbol: -
Assembly: GCA_945859775.1
Location: CAMAOS010000033.1:1156123-1162512[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3.3e-05 0.0043 18.3 0.2 1 23 49 71 49 71 0.98

2 11 1.9e-06 0.00024 22.2 1.5 1 23 77 100 77 100 0.98

3 11 0.00019 0.025 15.8 1.0 1 23 106 128 106 128 0.97

4 11 2.4e-06 0.00031 21.9 3.7 1 23 134 156 134 156 0.98

5 11 0.21 27 6.3 2.0 1 23 161 183 161 183 0.92

6 11 0.019 2.4 9.6 0.2 3 23 191 212 190 212 0.94

7 11 0.0025 0.32 12.3 0.1 1 23 218 239 218 239 0.98

8 11 1.7e-05 0.0022 19.2 4.1 1 23 245 267 245 267 0.99

9 11 7.6e-06 0.00099 20.3 2.2 1 23 273 295 273 295 0.99

10 11 0.0039 0.5 11.7 0.9 2 23 302 327 301 327 0.84

11 11 0.06 7.7 8.0 2.9 1 20 333 352 333 353 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3.3e-05	0.0043	18.3	0.2	1	23	49	71	49	71	0.98
2	11	1.9e-06	0.00024	22.2	1.5	1	23	77	100	77	100	0.98
3	11	0.00019	0.025	15.8	1.0	1	23	106	128	106	128	0.97
4	11	2.4e-06	0.00031	21.9	3.7	1	23	134	156	134	156	0.98
5	11	0.21	27	6.3	2.0	1	23	161	183	161	183	0.92
6	11	0.019	2.4	9.6	0.2	3	23	191	212	190	212	0.94
7	11	0.0025	0.32	12.3	0.1	1	23	218	239	218	239	0.98
8	11	1.7e-05	0.0022	19.2	4.1	1	23	245	267	245	267	0.99
9	11	7.6e-06	0.00099	20.3	2.2	1	23	273	295	273	295	0.99
10	11	0.0039	0.5	11.7	0.9	2	23	302	327	301	327	0.84
11	11	0.06	7.7	8.0	2.9	1	20	333	352	333	353	0.94

Sequence Information

Coding Sequence: ATGGATCTGAAAAGATCCCAATCCGAGGACGATGGTAGCAGCTCCTTGCGTGATAGTGGAATATCTCTATCAGATGAAACGCTTGAAGAAGAGGTCACAAAGGAAGACGTTAAGAAGAGGAAATGGCGAAAGGCACCAAAAAAATACGAATGCGCTGTGTGTGAGAAACAATTCAAAGGTTTGACAGACTTGAAGAGACACTTATTGATTCATTCGAATCAGAAGCCTTTCAAATGTGACTTGTGTGAGAAATCCTATCGACAGAAGGTCAATTTGAGTTATCACATGAAAATGGTGCATAGCAATGAAAAGGAGTTCATTTGTGGATTCTGTAAGAAACCATTTGCCTATAAGCAACGCCTCAGACTGCACTTGAGGGTGCATACTGGAGAGAAGCCTTATTGTTGTCAATATTGTACAAAGTCTTTTGCTCGAAGTGGACAGCTAAAACAGCATTTAGAAACTCACGAGGTGAACAAATTTTATTGTGAAATATGCTCATCGACATTTGCCAGTGAGAGAAGTCTTAAGTGTCATGTGGGACGCCACGGAGACGAACCAAATCGTATTTGTCAAATATGCAAAAAAGCATTTATGAATTCCAAAATCATGCAAGCTCATATGGTGCGAGTTCATTCGAATGCCGAACAATTCGAGTGTCCGATATGTGAGCTAACAATCACCACAGAGGACCTTCAGACCCATATGAAAGTTCACAGTCCAGCTAAGCGATTTCAGTGTGAACACTGTGATGCAGCGTTTGCCCAGAAATGCCAATATAAAGTTCACTTGAGAACACACACCGGAGAACGGCCTTTTCAATGCAAGGTTTGCTGGCAGACCTTTGCCCACAACAGTGTCCTTAAATTGCACATTCGCAAACACACCGGAGAGAAACCAATCAAATGCTTGCTGTGCAAGGATTCCTATGTAGCCTTCTCGCAGTTGGCTCACTTAAAAACTCACATGCGTACCATACACAAAAAAGATAACTCATACGCCTGTGAGGCTTGCAAAGAGTGCTTCAAAGTTAAATTCCATCTTGATAGACACAAAGAAGCCTGTAAGAAGTATCAATCACTCAAACGAACTGAATCGCTCGAAATTCTTGAAAACTCGGAACAGGATACGGAAAAACTATCAAGCCTTAGATATCTCATAGCTGTGCTACTGAAAAGTATATCCACACCGGAAAAACTCACAGATTTGGGTTTTGGTAAGCGACTAATAGACAACGTCCTGATGGCATCTCTCAAGCTGGCCAAACGAAAATGTTTCGAAAAGAAGAAAATGCATGAGTTCGATAAGTTGAAGCTGAATATACAATCATTCCTAGAATGGATTGTTCCCGAGGAGGTTTGGAATGAGTTCAAAAAAGAGTGTCCTTCCACAGAGAGTATTTTAGAGAAAATTGTCACAATGTATTTAAAACAGCGTGAATATATTCCATCTGAGGGAAATCCAAGCGATTCTGAATCTCTGGAAGACTTGGAATCGTCTTTTGAAGAAGAGTTTTCGGATCAAGTCGTGAATAAATGTGTTTCTGATGGACATCTAACCGAGTGGACAACAGTGAGTGGCCAATTCCTCAAAACGTTCACTTTCGAACAGAATGGTGTTGTAAATATTCAACCCTAA
Protein Sequence: MDLKRSQSEDDGSSSLRDSGISLSDETLEEEVTKEDVKKRKWRKAPKKYECAVCEKQFKGLTDLKRHLLIHSNQKPFKCDLCEKSYRQKVNLSYHMKMVHSNEKEFICGFCKKPFAYKQRLRLHLRVHTGEKPYCCQYCTKSFARSGQLKQHLETHEVNKFYCEICSSTFASERSLKCHVGRHGDEPNRICQICKKAFMNSKIMQAHMVRVHSNAEQFECPICELTITTEDLQTHMKVHSPAKRFQCEHCDAAFAQKCQYKVHLRTHTGERPFQCKVCWQTFAHNSVLKLHIRKHTGEKPIKCLLCKDSYVAFSQLAHLKTHMRTIHKKDNSYACEACKECFKVKFHLDRHKEACKKYQSLKRTESLEILENSEQDTEKLSSLRYLIAVLLKSISTPEKLTDLGFGKRLIDNVLMASLKLAKRKCFEKKKMHEFDKLKLNIQSFLEWIVPEEVWNEFKKECPSTESILEKIVTMYLKQREYIPSEGNPSDSESLEDLESSFEEEFSDQVVNKCVSDGHLTEWTTVSGQFLKTFTFEQNGVVNIQP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01318466; iTF_00426568; iTF_00335305; iTF_01357259; iTF_00694893; iTF_00427509; iTF_01212215; iTF_00894202; iTF_01396765; iTF_00664288; iTF_00665925; iTF_00974987; iTF_00984462; iTF_00188409;
90% Identity: iTF_00427509;
80% Identity: -