Basic Information

Gene Symbol
-
Assembly
GCA_900480035.1
Location
UELX01001919.1:8012-32407[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 32 7.4e-06 0.00083 20.2 1.0 1 23 235 257 235 257 0.98
2 32 0.0032 0.36 11.9 1.9 1 23 280 303 280 303 0.96
3 32 0.00016 0.018 16.0 0.5 2 23 310 332 309 332 0.96
4 32 0.00037 0.042 14.9 0.6 1 21 352 372 352 373 0.95
5 32 0.0014 0.16 13.1 0.1 2 23 482 503 481 503 0.97
6 32 0.041 4.7 8.4 0.2 1 23 509 532 509 532 0.89
7 32 5.4 6.1e+02 1.8 0.1 5 20 544 559 543 561 0.89
8 32 0.00014 0.016 16.2 0.1 1 23 601 624 601 624 0.96
9 32 0.086 9.7 7.4 0.4 1 23 630 653 630 653 0.96
10 32 0.14 16 6.7 1.5 1 23 666 688 666 688 0.97
11 32 5e-05 0.0056 17.6 0.3 3 23 732 753 731 753 0.96
12 32 0.043 4.9 8.4 0.9 2 23 816 839 815 839 0.93
13 32 3.7 4.1e+02 2.3 0.0 2 23 848 870 848 870 0.84
14 32 0.23 26 6.0 0.1 2 23 877 899 876 899 0.93
15 32 1.5e-05 0.0017 19.2 1.2 1 23 907 929 907 929 0.98
16 32 0.043 4.8 8.4 0.4 2 23 980 1003 979 1003 0.95
17 32 0.00025 0.028 15.4 3.3 1 23 1006 1029 1006 1029 0.97
18 32 0.011 1.2 10.3 0.4 2 23 1036 1058 1035 1058 0.95
19 32 0.00083 0.094 13.8 4.8 1 21 1100 1120 1100 1121 0.94
20 32 0.0032 0.36 11.9 1.8 2 23 1135 1156 1134 1157 0.93
21 32 1.5 1.7e+02 3.5 3.3 1 23 1160 1182 1160 1183 0.95
22 32 0.0093 1 10.5 0.9 2 23 1190 1213 1189 1213 0.93
23 32 1.1 1.3e+02 3.9 0.2 2 23 1221 1243 1221 1243 0.95
24 32 3.4 3.8e+02 2.4 0.0 2 23 1250 1272 1249 1272 0.88
25 32 0.27 30 5.9 2.7 2 23 1281 1303 1281 1303 0.96
26 32 0.31 35 5.7 0.8 2 23 1309 1331 1309 1331 0.93
27 32 0.021 2.4 9.3 0.1 1 23 1398 1421 1398 1421 0.96
28 32 0.036 4 8.6 2.0 1 20 1449 1468 1449 1470 0.91
29 32 0.38 42 5.4 1.9 2 23 1567 1589 1566 1589 0.94
30 32 0.12 14 6.9 0.7 2 23 1596 1618 1595 1618 0.95
31 32 0.36 40 5.5 1.8 1 23 1629 1651 1629 1651 0.97
32 32 0.042 4.7 8.4 0.9 1 21 1658 1678 1658 1679 0.92

Sequence Information

Coding Sequence
ATGGAGCGCAGCAAGGAGAAGTACGAGGAGCTCTGCAGGCTCTGCGCCTCCTACGACGCCGTCAAGATGGACATCTTCGGCCAGGAGGGCAAAAACAGACAGCTGGTGGATAAGATACAGACCTGCCTGCCCTTCAGGATAGCTGAAAATGACCGGCTACCAAAATGCCTTTGCTACAGATGCATGTACAATTTGGAGAATTTCTACGACTTCAGAACGGCCTGCGTCAATGCGGTCGCTTTGCTCGAGAGGTGCTTGCCACCGGAAGAGCCACAGACGGAGATAAAGAAGGAAGCGGAGGAAGTCGAGCCGTACTCGGAGCTGCGAATGGAGCTgctgaaagaaaaagagagcgtcggcgtcggcggcggcggcgttgcTGTAAAGAAGGAAAGAGTGAACGCGGAAAACGGTTTGCCAATGCTGATCCCCGAGGCGCCTGTGGTAAATCCAAACGCTGCTCTTGGTACTCCGCCGAGGCTAAAGTCGGACGGCGAGCCCGAACTCGACGAAATCGGACCCGATCATGCCGCCGTCAATGACTGCCTGGAAGATGATCACAAATCGGACGAGTACGAGATGGACATGGAGACGAATCCAAGTGACTTTCTGGAGATGAGCGCGATGGTGCCAGAAGAGGAGCAGGTAATACCCCCGGCCGACACCGGCGTCTTCCAGCATCGCAACGAGCAGCACGAGGTTTACGTCTGCTCGCTCTGCAACAAGGCTTTCAGCTCGAAGGGCCACCTCTCGCTCCACGCCAGGATACACGTGGGAGCTGGCGACGTGATTGGAGAGAAGGTCATCACCGATGATCACACCTCCTACAAGAGGCCTTACCAGTGCGATCTCTGCAACAAGTCATACTCGACGGCCAAGCATCGCTGGGGTCATGTATCCACGACGCatcgAGGTCACCCAGCAGTGACATGCGGCTACTGCTCGCGCATCTATTCAACGCGCACGAATCTCGAGGAACACATAAAGTCGCGGCACGCCGGACTACCTCCGCCGCCCGAGATGCAGGTACCGTACGTGCAACCTGACTCACGTTACCAGTGCAAGACCTGCCCCAAAATGTATACAAACATTACGGATCTGAACAAGCACAGCAGGCTGTGCCTCGGCGAGCAGCATCGCAGAGACAGCGGCTTCAACTCCCAGAACTTCGGTAAGAAAATGCCGATGTcaaaacttaaaaatgccTTGAACCCAGATCATGCTTCGGATATATCGAGTATTGATTCAGACtatgaaaataaagattacaGGAGCGCGGAAGCGAAACTTGCCAAAAATCCACAGTTGACTATTCTTAAGCAAGCTCTGATCAAGGGTGACTACGCTAAAAAGGAATACGAAGAAAGGCAGAAAATGTTAagcaaacagaaaaaattagCCCATACAAATAAGGAAACTCTAGATCCCGAATCAAAGCGATGGTACTGCGAAGTTTGTCCACTTAATTTTCCGACTGTGGATGATTTGAGACAGCATGAGAAGACCCACGATGCCGACAAGCCTTACATATGCATTCTTTGCGAGAAGGACTTCGTCTTGAAGTCGTCCTTGAGCAGGCATATTCTCGCATCTCATGGTGTGGATCCGACGCCATTGATCGAGAGTGACAAATGCTTAAAGAAGTCGGTGCAAGAGTCGAATTTGCGTCAGCACGCAATCAAGGAGGAGAATATTACCAAAGAAAATTCCTCGTCGCCTTCGTTTTCTCATGACAATATGGATAACGATGATGATGAGCGTGAGAACGGAAACGACAACATGCTCGAAATTGAGACAGTTTTCGTTTGCGAAATCTGTACGCGTGATTTTAATGATAGAGCGTCGCTTTGGTTACACATTCGAGCTACTCACAAAGAATACGCAGCATTTGCCTGCGGAGTTTGTCTGAAAATCTGTCAAGATAATGCGCAATTACTAAACCATGTCAATATGTACCACGGAGGCAATAAACTGTTAATGTCTGAACAGCGAagGTATAGCTGCACGATATGCGGTAGGCAGCACGATTCGCGGAAGAAGCTGATAACACACGTGTCAATTCATAATATAGATCCGGGCTATGATCCCGCAGGATTTGTTCAACTTAATACCAATTACTACAACGAAAATGTAAACAGTAACGAAGGCAATGAATTGATCATGGACTGCGAAGAAGAAACTGAAAAGGTTGACTGTTTCATTTGTTACAAGTCGTTCCCTAATGAAGACCAGCTTATACGTCACCAGCGAAACGCTCACAAAACCGAGCAAATGGTGCAAATGGGCGAAATGGGCGCAAACGGCGGTCCCAATGGTCAAAACGGTACAGGGAACCGAGCTCAGTATCACTTATTTTTTGTGTGCGAACTCTGTGGCAGTTCGCACCCCAGCAAGTGGGAACGCTGGCTACATGTTAGCAGCGTGCATGGAAATGAGTCCGCTATTAGAtgTGAACGCGATGATTGCGGAAAAATATTCGCCACGAAAACGCTACGCAACGAGCACGCGCAGCATCACCAGCTTCAGGGAAGCTCTCCGAACACCTGTGAGATTTGCGGCAAGCTGTGGGGCAGTCGCGTCGACTACTGGAAGCACGTGATGGGCGTTCATGCCGACACGGTGCCCCTAATCTGCGGAGTTTGTCTCAAGGTGTTCCCCGACGTACTTCAGCTTAGTCAACACGTCAAACTGAAGCATTGGCCACTCACCAATGGCGACTTTAGCTGCGATATTTGCGGCAGGCCGTATTCGAACAAGAGCAAAATGTCGAGGCATAGAAAGATTCATGGCCTGGATGGCGAGGCTTATAATCCTTCGGCGAACAACAGCAACTTAGTTATGAACGACTCGTCCATAAACGATACATTTAgtCTGCCGATGCCCCTGCAATTAGACAATGGACTACCGCATCCGATCGAGCAGGCCTCGATCGATCTGTCCTGCGAGATGTGTGGCGACCTCAAATTTCCCACTCTCGAAGATCTATGCAACCATCGGCGCGTAGCACACAGTCTCTTCCCATGCGACCTCTGCAATAAGTGTTACGGTCGCACCTCGCACCTCTGGAAACACGTAAACCGCGTGCACAAAGGTCATGAAGACGTGACCTGTCGCTACTGCCTCAAGACGAGTGCCTCAAGAGAGCACCTTGCCGCCCATATCGCGAAAATTCATCGCTACGAGCCCGAGGTGAAGAGTGAAATTAGAGAAGTAATGAGCTACAAAACCAGCAGCTACAAtgctgcggctgctgcagcagcatcttctataaaaattgaagatGATGACAACGTGCTCCATTTCTGCGAAAAGTGCAACAAATCCTTCCATAAGCGGTATTTGCTCCGACGTCATATGAAGGGCTGTCAGAACTACCGTAAGGATCCGGGCTCTCTGCTAACGCGCTGTCGTGCTTGCGAGCGTATTTTCAAGGACAGGGCGAGCTTGCAAAAGCATATTGAGAATCACCACAGCTCGTTCGAGTGTCATCTCTGCAAAGAGACCATAACCTCCAAGCTTGGTATCATGACGCACAACCGCATGCACCACATGCACCATCCAGATCTCACCTGCGAGCTTGAGAACTGTCGCAAGCTCTTCAGAACAAAAGAGGACCTCGAATCGCATCGCAAAGATCACAAGCTCCCTGATCCACCAAATGTCTGCGACTTCTGCGGAGATACAGTGGAGAACAAGCTCAAGTTGAAGATGCACATTCTGAGCTTACATAGAAATGAAATCGGAGTTTCTTGTGGCGTCTGCTTGATCCCAATGAAGGATCCTAAGGATCTCAAGAAACACGTGGAGGAGGTACACGAGAGCATTCTGCTAAGGCCCAACACCTGCCAGgtcTGCGGTAAACAATACGCCTCCAAGTGGAAGGCGTTCGACCACACGAAGAAGTGTCACGGTAAGGTGTTCCGCACGTGCAAACAGTGCCTGGCGGTCTTCACGTCCGACGAGGATCTGCGCTATCATTACGAACACATTCACAACATTCCCAAGGACCAGCTCGACGCGTTCCAATACAAGCTCGAAGTGACGGGCATCAAGATGGAAGACTATGATCTGGGATCGCTCGAGGTCGTAGTGAAAGAGGAGCCTGAGGAGCTCGACTTCGACATGGAGCCGTTCGAGGAGGACAACGGCAACTCGAACGACTCGAAACGCCGAAGATCCGTGACTGACACCTACGATTGCGAGATCTGTCCGGAGATATTCCTGAACAACGAGCTGCTTTCCTCGCATTACAGGAACGTGCATAACACAGACCCGGAGCGCATGTATAAGAAGATAAAACTGGAGTCTAGTAAATCGAAGAAGAAGATGCGAGACAGAGAAAACTATGAATGCAAGAATTGTCAAAAGCAGTTCTGTACGAAGACCCTGTACCTTGGTCACGTGAGCGTTTGCACAAGGAAGAGCTCGGGAATGCCCCCGGCGTCTATTTTGGAAGCGCACCTGAAGAACAATAATCAGATAAAGCGCGAGGAGCCCGAACCTATCCTCTGCGAGACGAACCTCAACATTCCTGATTTTAACCTCTTTGAAGACATCAACATGCAGCTGTCAGGCCAAAAGCCAGTACCAAGCTTGATGCCCCTCGGTACAGGTGGAGGTGGTCATTTATCCAAGTCTTCCAAGTACTCTCGCAAGGACTCGCGCAAGGTCTACGACGAATCGACTAACACCGAGTGCACCTGCGAGGTATGCGGCAAGCAGTGGCCCGCCAAGAAGCATCTATGGCAGCATCTGATCCGCTTCCATCGAGCTGAGGCCGCCGTTACTTGTGGCGTCTGTCTCAAGCTCTGCTCCACCTACGAAGACCTGACTGAGCATCTGAAGAATATACACCCGGCCATTCTTTCGACGACTGGCAACAACTTCACCTGTAAGGTCTGCGGACGCTACCATAATGCGCGTAGTAAGCTGCTCTTGCACATGAGTATCCACATTAACTGCACGAGTAACCACATGTGCACGAGCTGCAACAGGAGCTTCGAGAGTGACGAGAAACTGCGGGAGCACCTTACCACGTGTATGGGAGCACGAAGCGAACAAACCGGTGAGGAAGGCCAGCAGGTAACCGTGAAAGAGGAGGGTGAGGAGAAGGGCAGTCTCATCGGCGATGAGGAAGGCGCTGGAGAGAACGAATTTGAATCCGAAGACGAGGACAATTCCGAGAACAGCAGCTCTGACAAGTCCAACGACTCcgacagcaacagcagcaacagtgACAGCAATAGTTCGAGCGACGATGATAGCGACGAAGACGAGGACGGCAGGTCAAGAAATATTGAGGAGGATAGCAGTAACAGCAAGCAATCGATCACCGTCGAGGAAATGCAGCCCAACATCAAGCGTGAAGTGATGGAGGAGAACGAAACGATGAGCATGGCAGGGGATGACGATGAAGAAGATGATGACGATGAGAAACAGGGATATGAGGGAATGTCCGAGTCGGATGATGAATATCAGAAAAAGAGTTTGGCAGAACAGCAACACCACGAGCTGGAGGAGCAGTACGAGATGGCGCAGAAGGAGCCGATGCTTGTCAATTATTCAGACGATGAAGGACCTCCGGCTCTTAGCCCTATGATGCCGATGGCCATCAAACAGGAAGGAAGCGAGCAGAACGACGACAGCCAGGAGGAGCTCGGTCGGCAGCGCACTCTCAGCGACTCGTTAAGTGCCAAGAAGAAGAGCGACAGTGAGGAGAGCAGTGAGGAGGAAGAGGCCGAGGGATCCGAGGTGGAGCATGCTGAGATCGTCGATCCTAACAGCGCCTTCCATGCTGACAATAATTCGAGGAGCAGTAACGAAGGTGAAGAGCAAGAGCAAGAGCAAGAAGTAGTCGAAGAGCAAGAAGTAGAGGAAGAACAGGAACAAGagcaggaagaagaagaagaagaagaagaagaagaagaagaagaacaacaagaacaagaaatagaagaaggagaagaacaAGAAATTCAAGAAGTAGAGGAGGAGGAAGACGTTGAGAACATGGAGCACGGTTTGAATGAGGAGGAAGTACTAGAAGTCGATGAAAACGGTATGCACAATCTGAACGGCACGGTGCTAATGCTAGCCAATGACGAGGATGGTAACCAAATTCTTATTGAACGTAACATGGCAGATCTTGAGAACGATGACTCCGTCCACGATATGGCGCAGTACGTTTTTCAGGACGGCACGGGCTTCGCCCTCGAGGATTACGAAGCGATAGTCCAGAGTCAGGGTGACGAAGAAGAGGAAGATCACCACGGGTTTGCCATGGAAATTGGACACTCCCAAGAGGAGGAAGTCGAAGAACAAGAGCAAGAACTAGAACAGGAGCACGAGCAGGAGGAAGTAGGGGaggcggaggaggaggaagaggaagaagagatggaggaagaggaagagcaTGAACAAGATCAAGAACATGAACAAGAACATGAACATCAAGTGACAGAAGAGTGTGAAGTTGAGGAGGAGGAAGTCACGGAGGAGCACGTGCACGAACAGGTGGAGGACGAAGAGGAGCTAAGTTCCAGTGCCAAAAGTTAA
Protein Sequence
MERSKEKYEELCRLCASYDAVKMDIFGQEGKNRQLVDKIQTCLPFRIAENDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPPEEPQTEIKKEAEEVEPYSELRMELLKEKESVGVGGGGVAVKKERVNAENGLPMLIPEAPVVNPNAALGTPPRLKSDGEPELDEIGPDHAAVNDCLEDDHKSDEYEMDMETNPSDFLEMSAMVPEEEQVIPPADTGVFQHRNEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGLPPPPEMQVPYVQPDSRYQCKTCPKMYTNITDLNKHSRLCLGEQHRRDSGFNSQNFGKKMPMSKLKNALNPDHASDISSIDSDYENKDYRSAEAKLAKNPQLTILKQALIKGDYAKKEYEERQKMLSKQKKLAHTNKETLDPESKRWYCEVCPLNFPTVDDLRQHEKTHDADKPYICILCEKDFVLKSSLSRHILASHGVDPTPLIESDKCLKKSVQESNLRQHAIKEENITKENSSSPSFSHDNMDNDDDERENGNDNMLEIETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICQDNAQLLNHVNMYHGGNKLLMSEQRRYSCTICGRQHDSRKKLITHVSIHNIDPGYDPAGFVQLNTNYYNENVNSNEGNELIMDCEEETEKVDCFICYKSFPNEDQLIRHQRNAHKTEQMVQMGEMGANGGPNGQNGTGNRAQYHLFFVCELCGSSHPSKWERWLHVSSVHGNESAIRCERDDCGKIFATKTLRNEHAQHHQLQGSSPNTCEICGKLWGSRVDYWKHVMGVHADTVPLICGVCLKVFPDVLQLSQHVKLKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGEAYNPSANNSNLVMNDSSINDTFSLPMPLQLDNGLPHPIEQASIDLSCEMCGDLKFPTLEDLCNHRRVAHSLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRYCLKTSASREHLAAHIAKIHRYEPEVKSEIREVMSYKTSSYNAAAAAAASSIKIEDDDNVLHFCEKCNKSFHKRYLLRRHMKGCQNYRKDPGSLLTRCRACERIFKDRASLQKHIENHHSSFECHLCKETITSKLGIMTHNRMHHMHHPDLTCELENCRKLFRTKEDLESHRKDHKLPDPPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEEVHESILLRPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSDEDLRYHYEHIHNIPKDQLDAFQYKLEVTGIKMEDYDLGSLEVVVKEEPEELDFDMEPFEEDNGNSNDSKRRRSVTDTYDCEICPEIFLNNELLSSHYRNVHNTDPERMYKKIKLESSKSKKKMRDRENYECKNCQKQFCTKTLYLGHVSVCTRKSSGMPPASILEAHLKNNNQIKREEPEPILCETNLNIPDFNLFEDINMQLSGQKPVPSLMPLGTGGGGHLSKSSKYSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCSTYEDLTEHLKNIHPAILSTTGNNFTCKVCGRYHNARSKLLLHMSIHINCTSNHMCTSCNRSFESDEKLREHLTTCMGARSEQTGEEGQQVTVKEEGEEKGSLIGDEEGAGENEFESEDEDNSENSSSDKSNDSDSNSSNSDSNSSSDDDSDEDEDGRSRNIEEDSSNSKQSITVEEMQPNIKREVMEENETMSMAGDDDEEDDDDEKQGYEGMSESDDEYQKKSLAEQQHHELEEQYEMAQKEPMLVNYSDDEGPPALSPMMPMAIKQEGSEQNDDSQEELGRQRTLSDSLSAKKKSDSEESSEEEEAEGSEVEHAEIVDPNSAFHADNNSRSSNEGEEQEQEQEVVEEQEVEEEQEQEQEEEEEEEEEEEEEQQEQEIEEGEEQEIQEVEEEEDVENMEHGLNEEEVLEVDENGMHNLNGTVLMLANDEDGNQILIERNMADLENDDSVHDMAQYVFQDGTGFALEDYEAIVQSQGDEEEEDHHGFAMEIGHSQEEEVEEQEQELEQEHEQEEVGEAEEEEEEEEMEEEEEHEQDQEHEQEHEHQVTEECEVEEEEVTEEHVHEQVEDEEELSSSAKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00690510;
90% Identity
iTF_00691363;
80% Identity
-