Basic Information

Gene Symbol
ZNF236
Assembly
GCA_900480035.1
Location
UELX01002360.1:69-12505[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 27 7.6e-05 0.0086 17.0 3.4 1 23 107 129 107 129 0.97
2 27 0.00017 0.019 15.9 1.6 1 23 135 157 135 157 0.97
3 27 1.5e-06 0.00016 22.4 0.2 2 23 163 184 163 184 0.98
4 27 0.0018 0.2 12.7 0.1 2 23 191 212 190 212 0.96
5 27 0.00076 0.086 13.9 1.6 2 23 223 244 223 244 0.97
6 27 2.6e-06 0.00029 21.7 0.3 1 23 265 287 265 287 0.99
7 27 0.00026 0.03 15.3 3.6 1 20 293 312 293 315 0.96
8 27 0.00015 0.017 16.1 0.9 1 23 321 344 321 344 0.96
9 27 0.0016 0.18 12.9 1.8 1 23 353 376 353 376 0.98
10 27 2.1e-07 2.3e-05 25.1 1.5 1 23 462 484 462 484 0.99
11 27 0.0001 0.012 16.6 3.1 1 23 490 512 490 512 0.99
12 27 0.0042 0.47 11.6 0.9 1 23 518 540 518 540 0.97
13 27 0.0072 0.82 10.8 1.0 1 23 544 567 544 567 0.94
14 27 0.0049 0.56 11.3 4.9 1 23 624 646 624 646 0.98
15 27 2.3e-06 0.00025 21.8 1.6 1 23 652 674 652 674 0.99
16 27 6.7e-06 0.00076 20.3 1.3 1 23 680 702 680 702 0.99
17 27 0.0001 0.011 16.6 4.7 2 23 709 730 708 730 0.97
18 27 0.0074 0.83 10.8 1.6 1 23 1004 1026 1004 1026 0.98
19 27 0.00017 0.019 16.0 4.0 1 23 1032 1054 1032 1054 0.98
20 27 0.00025 0.029 15.4 0.2 1 21 1060 1080 1060 1081 0.96
21 27 4e-07 4.5e-05 24.2 0.6 2 23 1117 1138 1116 1138 0.98
22 27 0.0005 0.057 14.4 2.0 1 23 1144 1166 1144 1166 0.99
23 27 0.00035 0.04 14.9 2.1 1 23 1172 1194 1172 1194 0.98
24 27 0.00022 0.025 15.5 4.1 1 23 1200 1222 1200 1222 0.98
25 27 7.2e-05 0.0081 17.1 0.6 2 23 1426 1447 1426 1447 0.97
26 27 8e-06 0.0009 20.1 3.5 1 23 1453 1475 1453 1475 0.98
27 27 6.3e-05 0.0071 17.3 5.6 1 23 1481 1504 1481 1504 0.97

Sequence Information

Coding Sequence
CCAATCCAAGTGATAGATTTAgaatctcaaaattttcaatcagtaaacgagaaaaaaatccaatcagCAGAAGTATTAACTCACCTGTTAAATAAAACAACTCATTGTAACTCTACAAATGTTCAAGATACTACAAAAGTTATTTCtgaagaaaaagaacaaattttaggAAAAACACATGTGGATAAAATATCTCAATCATCAAAAGATGCTTCtgttaatgttgaaaaaagTTCTGAAACTTCTAAAAAGTATGCACATAAAACTCTTGGAAgaccaaaaaaaaatagtaaaactggaGATACAgagcAAGCATGGTTTACGTGTGATATTTGTGGTCAACaattcaaaaaacaatatttgatgCAAAAACACATGCATGAACATGCCCAAGATAAACCCCACCATTGTCCAAAATGCCCTGCATCATTCAATGTACCAACGAATTTCACTTTGCATATGGCAACGCACAATATCGGGGAGCCAAAATGTCCCGAGTGTGGTCGAAAGTTCGCGCGTTTGGCCAGCTTGAAGTCGCACATGCTGATACATGAAGTGGACGAGAATCTCTACTGCACCGAATGCGATGATGCATTTGGgacaaagGCACAGCTGGAGGCTCACCTGAAGCTTCACAACGAGAAATGCTCGAGCGAAGACTACAGGAGGTGCAAACTGTGCCGCAAGCAGTTCAGCCAGCCCGTACTTTACCGACAGCATCTGCGCGACCATTACAAAttgcaaACCAAGTGCGTAAAACAGACGAAACGGGGCATTAGACACAGAACTGTCTACAAGTGCAGGATCTGCTTAAAAGCATTCGAAAAGCCAAGCCAATTGGTACGCCACATCAGGGTGCACACCGGCGAGAAACCATACAAGTGTCATTTATGTCACCGAAGCTTTACGCAGAAAGGTTCTGTGAGGATTCACATGTGGCAGCACAATGGAATCAGACCTTACAACTGTTCCTTTTGCCAGGCTAAATTTAGTCAAAAAgGTAATCTTAATTCGCACGTCCTTAGAGTGCACAAAATCCAAGAGGGCACGCCGATGTACCGCTGCACCCAGTGTCCTTGTATCTTCAAAAAGCTCGGTAGTCTAAATGGACACCTGAAGCGCGCGCATAGCGGAGAGCCACGCGACGTCGACGAAGAGGAGCAGAGTGACGAGAACATCATTGAAGAACAGCCAGATTCCATCGAAACGCttgaaaatcatgaaaataaaagctcTACCAAGGtgctgaaaaattttgaagatggCTTTGTTGTCACGGACGATAATGAGACCGCACTGGTCACTTTAATTGATAAAACGTCTGATGACGCCAAAGGcaaatacattaaaataaagcaacGCTCTGTAAATAATTCTAGATTTTACGAATGCTCTTTCTGTGATAAAAAGTTCAAGAAGCCGTCAGATCTTATGAGGCATTTAAGAATTCATACTCAAGAAAAACCTTTTAAGtgTAAGATATGTAGtaaatcatttactttaaaatcaacAATGCTGTCGCACGAAAAAActcatgaaaattttgaaagcttttCGTGCCAAGAGTGCAGTTCGttttttaactctaaaaaaGCACTTGAAGCTCACGAAAAgttgCATAATAAAGAGCACAAGTGCGCACTGTGTGATATcaagtttggtaattttgacgaattgaaaaatcatgcaAAAGCAAAGCACATGGCATCTAAAAAGGAGAGGCTAAAGTCCCAAGTTCCACCAGAGGTACAAAAGTTGGCTCCCAAAATTGTGTTGAAAGAGCCGCTTGTTTTAACTGAAGCAAGTAATGGATTGCTTCATGCCCAACCGAAGTTTCGTAATGAAGTTGCTCACGGTAAGGGTAGGCCACATAAATGTCCAGCTTGTCCTGCTGCTTTTATGAAGCTCAGCCATCTTAAACAGCATCATCGAAAACATACTGGCGAACGACCCTACGTGTGTTATCTTTGCGATAGaCGATTTACAACAAACGGTGCACTAAAAACTCATCGGCGAACACACGATTTATCACAGCCTTACAAATGTTCTATTTGTAGCCgaagtttttcagttttaagtAGTATGAAGAGACATCTCATTACTCATAGCAACAAACGTCCTATTATGTGCCcatattgtaataaaacttttaagacGACAGATAATTGTAGAAAGCACATGCAAAAACATAAACACGAGATCGCTCAACAGCAATTAGAACTTCAGAAACAGCAACAATCACCGAATTTATCTTCAAATCTCCCACAAAGTATAACTTCTGCGGAACAAATTGCTAATACAAATCAAGAGATAAACTATCAGCCTATTGCAGCTGCTTtgtcacaaaacttaaaaaattcacatcAAAGATTATTTAAGGATGgtgataaatcttttttctcacaaaatataccTGTAGTACACAATCCTAACATAGGTACAACTCAAACATTGCATGCCGATGAGACAGGCACTGTTACCCTATCTAATTTTACGGGTGATCAAACGCTTACACCTGAAAGCATACGCGAAATCGAAGAAACTCTAAATCAACAATTATACAGTATTGGTATGAACCTTGCATTAAACAGCACTGTTAGACAAATTGAGGAGCATAATAATTTACCGTTGGAAGCTCAAGACCAACCTGTATTGAGTATAATTTATGATAGTGGAAAAACTCTTAGTTCGCCCATAAGTACATCTGTAAATACAAATATCTTCACACCTCGATTTGATACTTTTGatattaatcaaataacattACAGggcgaaaatgaaattgatatgGGAATTTCACAAGCTAATTCAACAAACATGGCTAGTATTTTACCTAAATCTCATCAAGAAAGTGAATGCTATAATACgcagttaattaataatgactttgaaataaatatgattaataatCGAAATGAGCacacaaataaaattgttgatgaTTCGGTGATtgaacaaaaagtaaatgatattaaacaagacaataataaattggataaagaaaataattttcaatgtcaCATGTGCCAAATGCAAGGTTTTAGTGCTGAAGATTTGAAAGAACATTTAAAAACTCATGATGGAATTAGAAAATTCGAATGTACCCATTGTTCTTCAACATTTTGTTCGAGTGGAGGTCTTAATAGACATATAAAAGTTCATGAAGTTCAAGAgacATATAAATGTTATGAATGCAATAAAGAATTTCCTACTTCATTAGAATTAAGAGAGCACATTAAGGACACTGTTAAGAAtgagttgaaattaaaaaagtcagaAGAAGGTGAAGATATCATAGATGATATTGAATTGAGAAACAATgatGGAACTacggaaaggagaaaaaataaatgcatgtaTTGtccaaaaatttttcgtaaaccCAGTGATCTTATAAGACATATTAGAACACATACCGGAGAACGACCGTATCAGTGccaattttgtgaaaaaagttttgcagTGAAATGTACATTAGATgctcatttaaaaattcatggtGGGGAGAAAACATTTCATTGCCATGTGTGTAACGCTATGCTCGCTACAAAAGGTAGTCTTAAAGTTCACATGCGACTACATACAGGTGCTAAGCCTTTTAAGTGCTCAAAATGTGATATGAAATTCCGAACCTCGGGCCATCGAAAAATTCATATGATCTCTCATACTCGCGAACCAAACACATCGTCTTCGCACAAAACCAAAAAGTTAGCAGCTTTAAATGCAGCAACAACTATACCCAATAATTTGGAACCTCTCAAAGTTGATCAAATTTCGCATATTGTACCTATGCCTCAAGAAACTGTTATGTTGCCAGACAGCCAAACTATCGATGACGATCAACATTTAAACACCATAACAATAAATTCAGTTAATGAACAGATTACTTTTAATGGGGATGACGGGGCAGGACTTTTAGCTTTAAGTGAGAACAGCCAGTTAGTAGCTAATCTTCAATTTTTGCTGGCGAACGGGTTTGTCACTATTCATACTGAAGATCCAACAATCTCTACTCAATTGCCTCTATCTTCAGTAACCGAAGTACAAGATGATTTTGTCGCGGAAAGCACTGTGCCAAAGATTGAAGATCAAGAGTTCAGCCCTCAAGTAATATACACTGCAGAAATACCAGATTCGGTGTCTGCAGTGAATGAAAACGATTTCCAGATGAATAACTGTATGGTCTTGCAACTGGAAAATGTTGATTCTACCGTGCCGGATAAAAtggaagaaaatataaaacaaattaaatctcCAAGtaATGCAACAAGGCGTGAATGCGATATTTGTGGAAAAGCATTTGCAAAACCATGTCAAGTTGAGCGACATAAACGCATTCACACGGGTGAACGTCCTTTTAAATGCGAACTCTGCAACAAAGCTTTTGCTCAAAAATCAACCTTGCAGATGCACCAAAAACACCACGCTGGCGATCGGCCCCATTCTTGTCCCCATTGCACGCGCGCTTTTACTCAAAATGGAAATTTGCACACTCACCTCAAGCGAGTACATAAAATCGATACGGCACAAATGAAAAAGACGACCAAGAATCAGCAACAATTTGTGCACTATGATCTGAAATTGGCGCAATCGAGTCCTGATGACGGGAGAATACTCAGCTTCGATGACTTTTCCATTGTtgaacttttaaagtaa
Protein Sequence
PIQVIDLESQNFQSVNEKKIQSAEVLTHLLNKTTHCNSTNVQDTTKVISEEKEQILGKTHVDKISQSSKDASVNVEKSSETSKKYAHKTLGRPKKNSKTGDTEQAWFTCDICGQQFKKQYLMQKHMHEHAQDKPHHCPKCPASFNVPTNFTLHMATHNIGEPKCPECGRKFARLASLKSHMLIHEVDENLYCTECDDAFGTKAQLEAHLKLHNEKCSSEDYRRCKLCRKQFSQPVLYRQHLRDHYKLQTKCVKQTKRGIRHRTVYKCRICLKAFEKPSQLVRHIRVHTGEKPYKCHLCHRSFTQKGSVRIHMWQHNGIRPYNCSFCQAKFSQKGNLNSHVLRVHKIQEGTPMYRCTQCPCIFKKLGSLNGHLKRAHSGEPRDVDEEEQSDENIIEEQPDSIETLENHENKSSTKVLKNFEDGFVVTDDNETALVTLIDKTSDDAKGKYIKIKQRSVNNSRFYECSFCDKKFKKPSDLMRHLRIHTQEKPFKCKICSKSFTLKSTMLSHEKTHENFESFSCQECSSFFNSKKALEAHEKLHNKEHKCALCDIKFGNFDELKNHAKAKHMASKKERLKSQVPPEVQKLAPKIVLKEPLVLTEASNGLLHAQPKFRNEVAHGKGRPHKCPACPAAFMKLSHLKQHHRKHTGERPYVCYLCDRRFTTNGALKTHRRTHDLSQPYKCSICSRSFSVLSSMKRHLITHSNKRPIMCPYCNKTFKTTDNCRKHMQKHKHEIAQQQLELQKQQQSPNLSSNLPQSITSAEQIANTNQEINYQPIAAALSQNLKNSHQRLFKDGDKSFFSQNIPVVHNPNIGTTQTLHADETGTVTLSNFTGDQTLTPESIREIEETLNQQLYSIGMNLALNSTVRQIEEHNNLPLEAQDQPVLSIIYDSGKTLSSPISTSVNTNIFTPRFDTFDINQITLQGENEIDMGISQANSTNMASILPKSHQESECYNTQLINNDFEINMINNRNEHTNKIVDDSVIEQKVNDIKQDNNKLDKENNFQCHMCQMQGFSAEDLKEHLKTHDGIRKFECTHCSSTFCSSGGLNRHIKVHEVQETYKCYECNKEFPTSLELREHIKDTVKNELKLKKSEEGEDIIDDIELRNNDGTTERRKNKCMYCPKIFRKPSDLIRHIRTHTGERPYQCQFCEKSFAVKCTLDAHLKIHGGEKTFHCHVCNAMLATKGSLKVHMRLHTGAKPFKCSKCDMKFRTSGHRKIHMISHTREPNTSSSHKTKKLAALNAATTIPNNLEPLKVDQISHIVPMPQETVMLPDSQTIDDDQHLNTITINSVNEQITFNGDDGAGLLALSENSQLVANLQFLLANGFVTIHTEDPTISTQLPLSSVTEVQDDFVAESTVPKIEDQEFSPQVIYTAEIPDSVSAVNENDFQMNNCMVLQLENVDSTVPDKMEENIKQIKSPSNATRRECDICGKAFAKPCQVERHKRIHTGERPFKCELCNKAFAQKSTLQMHQKHHAGDRPHSCPHCTRAFTQNGNLHTHLKRVHKIDTAQMKKTTKNQQQFVHYDLKLAQSSPDDGRILSFDDFSIVELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00691356;
80% Identity
-