Ekie002756.1
Basic Information
- Insect
- Eupelmus kiefferi
- Gene Symbol
- ZNF236
- Assembly
- GCA_030522745.1
- Location
- JAPYZB010001365.1:8298-14092[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.00087 0.22 14.1 1.6 2 23 25 46 25 46 0.97 2 23 2.9e-06 0.00074 21.9 0.3 1 23 67 89 67 89 0.99 3 23 0.0003 0.076 15.5 3.6 1 20 95 114 95 117 0.96 4 23 0.00017 0.042 16.3 0.9 1 23 123 146 123 146 0.96 5 23 0.0018 0.45 13.1 1.8 1 23 155 178 155 178 0.98 6 23 2.4e-07 5.9e-05 25.3 1.5 1 23 264 286 264 286 0.99 7 23 0.00012 0.03 16.8 3.1 1 23 292 314 292 314 0.99 8 23 0.0029 0.72 12.5 0.8 1 23 320 342 320 342 0.97 9 23 0.0083 2.1 11.0 1.8 1 23 346 369 346 369 0.94 10 23 0.0056 1.4 11.5 4.9 1 23 426 448 426 448 0.98 11 23 2.6e-06 0.00065 22.0 1.6 1 23 454 476 454 476 0.99 12 23 7.7e-06 0.0019 20.5 1.3 1 23 482 504 482 504 0.99 13 23 0.00012 0.029 16.8 4.7 2 23 511 532 510 532 0.97 14 23 5.2 1.3e+03 2.2 3.8 1 23 806 828 806 828 0.95 15 23 0.011 2.8 10.6 3.1 1 23 834 856 834 856 0.96 16 23 0.00029 0.073 15.6 0.2 1 21 862 882 862 883 0.96 17 23 4.6e-07 0.00011 24.4 0.6 2 23 919 940 918 940 0.98 18 23 0.00057 0.14 14.7 2.0 1 23 946 968 946 968 0.99 19 23 0.0004 0.1 15.1 2.1 1 23 974 996 974 996 0.98 20 23 0.00026 0.064 15.8 4.1 1 23 1002 1024 1002 1024 0.98 21 23 8.2e-05 0.021 17.3 0.6 2 23 1228 1249 1228 1249 0.97 22 23 9.1e-06 0.0023 20.3 3.5 1 23 1255 1277 1255 1277 0.98 23 23 5.6e-05 0.014 17.8 6.5 1 23 1283 1306 1283 1306 0.97
Sequence Information
- Coding Sequence
- ATGTTGTTGCAGGCACAGCTGGAGGCTCACCTAAAGCTTCACAACGAGAAATGCTCGAGCGAAGACTACAGGAGGTGCAAACTGTGCCGCAAGCAGTTCAGCCAGCCTGTACTTTACCGACAGCATTTGCGCGACCATTACAAAttgCAAACCAAGTGCGTAAAACAGACGAAACGGGGCATTAGACACAGAACTGTCTACAAGTGCAGGATCTGCTTAAAAGCATTCGAAAAGCCAAGCCAATTGGTACGCCACATCAGGGTGCACACCGGCGAGAAACCATACaagTGTCATTTATGTCACCGAAGCTTTACGCAGAAAGGTTCTGTGAGGATTCACATGTGGCAGCACAATGGAATCAGACCTTACAACTGTTCCTTTTGCCAGGCTAAATTTAGTCAAAAAgGTAATCTTAATTCGCACGTCCTTAGAGTGCACAAAATCCAAGAGGGCATGCCGATGTACCGCTGCACCCAGTGTCCTTGTATCTTCAAAAAGCTCGGTAGTCTAAATGGACACCTGAAGCGCGCGCATAACGGAGAGCCACGCGACCTCGACGAAGAGGAGCAGAGTGACGAGAACATCATTGAAGAACAGCCAGATTCCATCGAAACGATTGAAAATCAGGAAAATCAAAGCACTACCAAGGtgctgaaaaattttgaagatggCTTTGTTGTCACGGACGATAATGAGACCGCACTGGTCACCTTAATTGATAAAACGTCCGATGACGCCAAAGGcaaatacattaaaataaagcaACGTTCTGTAAATAATTCTAGATTTTACGAATGCTCTTTCTGTGATAAAAAGTTCAAGAAGCCGTCAGACCTTATGAGGCATTTAAGAATTCATACTCAAGAAAAACCTTTTAAGtGTAAGATATGtagtaaatcatttactttaaaatcaacAATGCTGTCGCACGAAAAAActcatgaaaattttgaaagtttttcgTGCCGAGAGTGCAGTTTGTTTTTTAACTCTAAAAGAGCGCTTGAAGCTCACGAAAAgttgCATAATAAAGAGCACAAGTGCGCACTGTGTAATATAAAGTTTgataattttgacgaattgaaaAATCACGCAAAAGAAAAGCACATGGCATCTAAAAAGGAGAGGCTAAAGACCCAAGTTTCACCAGAGCTACAAAAGTTGACTCCCAAAATTGTGCTGAAAGAGCCGCTTGTTTTAACTGAAGCAAGTAATGGATTGCTTCATGCCCAACCGAAGTTTCGTAATGAAGTTGCTCACGGTAAGGGTAGGCCACATAAATGTCCAGCTTGTCCTGCTGCTTTTATGAAGCTCAGCCATCTTAAACAACATCATCGAAAACATACTGGAGAACGACCCTACGTGTGTTATCTTTGCGATagACGATTTACAACAAACGGTGCATTAAAAACTCATCGGCGAACACACGATTTATCACAGCCTTACAAATGTTCTATTTGTAGCCGaagtttttcagttttaagtAGTATGAAGAGACATCTCATTACGCATAGCAACAAACGTCCTATTATGTGCCCATattgtaataaaacttttaagacGACAGATAATTGTAGAAAGCACATGCAAAAACATAAACACGAAATCGCTCAACAGCAATTAGAACTTCAGAAACAACAACAATCACCGAATTTATCTTCAAATCTCTCACAAAGTATAACTTCTGCGGAACAAATCGCTAATACAAATCAAGAGATAAACTATCAGCCTATTGCAGCTGCTttgtcacaaaacttaaaaaattcacatCAAAGATTAATTAAGGATGATGACAAATCTTTTTTCTCAcaaaatatacCTGTAGTTCACAATCCTAACATAGGTACAACTCAAACATTGCATGCCGATGAGACAGGCACTGTTACCCTATCTAATTTTACGGGTGATCAAACGCTTACACCTGAAAGCATACGCGAAATCGAAGAAACTCTAAATCAACAATTATACAGTATTGGTATGAACCTTGCATTAAACAGCACTGTTAGACAAATTGAAGAGCATAATAATTTACCGTTGGAAGCTCAAGACCAACCTGTATTGAGTATAATTTATGATAGTGGAAAAACTCTTAGTTCGCCCATAAGTACATCTGTAAATACAAATATCTTCACACCTCGATTTGATACTTTTGatattaatcaaataacatTACAGGGCGAAAATGAAATTGATATGGGAATTTCACAAGCTACTTCAACAAACATGGCTAGTATTTTACCTAAATCTCATCAAGAGAGTGAATGCTATAATACgcagttaattaataatgactttgaaataaatatgattaataaTCGAAATGAGCacacaaataaaattgttgatgATTCTGTGATtgaacaaaaagtaaatgatattaaacaagacaataataaattggataaagaaaataattttcaatgtcaCATGTGCCAAATGCAAGGTTTTTGTGCTGAAGATTTGaaagaacatttaaaaactcatgatggaattagaaaatttgaatgTATCCATTGTTCTTCAACATTTTGTTCGAGTGGCGGTCTTAATAGACATATAAAAGTTCATGAAGTTCAAGAGACATACAAATGTTATGAATGCAATAAAGAATTTCCTACTTCATTAGAATTAAGAGAGCACATTAAGGACACTGTTAAGAAtgagttgaaattaaaaaagtcagaAGAAGGTGAAGATATCATAGATGATATTGAATTGAGAAACAATgatGGAACTACagaaaggagaaaaaataaatgcatgtattgtccaaaaatttttcgtaaacCCAGTGATCTTATCAGACATATTAGAACACATACCGGAGAACGACCCTATCAGTGccaattttgtgaaaaaagttTTGCAGTCAAATGTACATTAGATgctcatttaaaaattcatggtGGGGAGAAAACATTTCATTGTCATGTGTGTAACGCTATGCTTGCTACAAAAGGTAGTCTTAAAGTTCACATGCGACTACATACAGGTTCTAAGCCTTTTAAGTGCTCAAAATGTGATATGAAATTCCGAACCTCGGGCCATCGAAAAATTCATATGATCTCTCATACTCGCGAACCAAACACATCGTCTTCGCACAAAACCAAAAAGTTAGCAGCTTTAAATGCAGTAACAACTATTCCCAATAATTTGGAACCTGTCAAAGTTGATCAAATTTCGCATATTGTACCTATGCCTCAAGAAACTGTTATGTTGCCAGACAGCCAAACTATCGATGACGATCAACATTTAAACACCATAACAATAAATTCAGTTAATGAACAGATTACTTTTAATGGGGATGACGGGGCAGGACTTTTAGCTTTAAGTGAGAACAGCCAGTTAGTAGCTAATCTTCAATTTTTGCTGGCGAACGGGTTTGTCACTATTCATACTGAGGATCCAACAATCTCTACTCAATTGCCTCTATCTTCAGTAACCGAAGTACAAGATGATTTTGTCGCGGAAAGCACTGTGCCAAAGATTGAAGATCAAGAGTTTAGCCCTCAAGTAATATACACTGCAGAAATACCAGATTCGGTGTCTGCAGTAAATGAAAACGATTTCCAGATGAATAACTGTATGGTCTTGCAACTGGAAAATGTTGATTCTACCGTGCCGGATAAAATGGaagaaaacataaaacaaattaaatctcCAAGTAATGCAACAAGGCGTGAATGCGATATTTGCGGAAAAGCATTTGCAAAACCATGTCAAGTTGAGCGACATAAACGCATCCACACGGGTGAACGTCCTTTTAAATGCGAACTCTGCAACAAAGCTTTTGCTCAAAAATCAACCTTGCAGATGCACCAAAAACATCACGCTGGCGATCGGCCCCATTCTTGTCCCCATTGCACGCGCTCTTTTACTCAAAATGGAAATTTGCACACTCACCTCAAGCGAGTACATAAAATCGATACGGCACAAATGAAAAAGACGACCAAGAATCAGCAACAATTTGTGCACTATGATCTGAAACTGGCGCAATCGAGTCCTGATGACGGGAGAATACTCAGCTTCGATGACTTTTCCATTGTTgaacttttaaagtaa
- Protein Sequence
- MLLQAQLEAHLKLHNEKCSSEDYRRCKLCRKQFSQPVLYRQHLRDHYKLQTKCVKQTKRGIRHRTVYKCRICLKAFEKPSQLVRHIRVHTGEKPYKCHLCHRSFTQKGSVRIHMWQHNGIRPYNCSFCQAKFSQKGNLNSHVLRVHKIQEGMPMYRCTQCPCIFKKLGSLNGHLKRAHNGEPRDLDEEEQSDENIIEEQPDSIETIENQENQSTTKVLKNFEDGFVVTDDNETALVTLIDKTSDDAKGKYIKIKQRSVNNSRFYECSFCDKKFKKPSDLMRHLRIHTQEKPFKCKICSKSFTLKSTMLSHEKTHENFESFSCRECSLFFNSKRALEAHEKLHNKEHKCALCNIKFDNFDELKNHAKEKHMASKKERLKTQVSPELQKLTPKIVLKEPLVLTEASNGLLHAQPKFRNEVAHGKGRPHKCPACPAAFMKLSHLKQHHRKHTGERPYVCYLCDRRFTTNGALKTHRRTHDLSQPYKCSICSRSFSVLSSMKRHLITHSNKRPIMCPYCNKTFKTTDNCRKHMQKHKHEIAQQQLELQKQQQSPNLSSNLSQSITSAEQIANTNQEINYQPIAAALSQNLKNSHQRLIKDDDKSFFSQNIPVVHNPNIGTTQTLHADETGTVTLSNFTGDQTLTPESIREIEETLNQQLYSIGMNLALNSTVRQIEEHNNLPLEAQDQPVLSIIYDSGKTLSSPISTSVNTNIFTPRFDTFDINQITLQGENEIDMGISQATSTNMASILPKSHQESECYNTQLINNDFEINMINNRNEHTNKIVDDSVIEQKVNDIKQDNNKLDKENNFQCHMCQMQGFCAEDLKEHLKTHDGIRKFECIHCSSTFCSSGGLNRHIKVHEVQETYKCYECNKEFPTSLELREHIKDTVKNELKLKKSEEGEDIIDDIELRNNDGTTERRKNKCMYCPKIFRKPSDLIRHIRTHTGERPYQCQFCEKSFAVKCTLDAHLKIHGGEKTFHCHVCNAMLATKGSLKVHMRLHTGSKPFKCSKCDMKFRTSGHRKIHMISHTREPNTSSSHKTKKLAALNAVTTIPNNLEPVKVDQISHIVPMPQETVMLPDSQTIDDDQHLNTITINSVNEQITFNGDDGAGLLALSENSQLVANLQFLLANGFVTIHTEDPTISTQLPLSSVTEVQDDFVAESTVPKIEDQEFSPQVIYTAEIPDSVSAVNENDFQMNNCMVLQLENVDSTVPDKMEENIKQIKSPSNATRRECDICGKAFAKPCQVERHKRIHTGERPFKCELCNKAFAQKSTLQMHQKHHAGDRPHSCPHCTRSFTQNGNLHTHLKRVHKIDTAQMKKTTKNQQQFVHYDLKLAQSSPDDGRILSFDDFSIVELLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00691356;
- 90% Identity
- iTF_00693217;
- 80% Identity
- -