Euro001004.1
Basic Information
- Insect
- Eupelmus urozonus
- Gene Symbol
- -
- Assembly
- GCA_900480035.1
- Location
- UELX01001777.1:14860-16245[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-11 8.4e-09 35.6 0.0 1 35 83 118 83 124 0.92
Sequence Information
- Coding Sequence
- ATGCTTGGGCTCCTCTGGAGgctgcaacagcagcagcccTGCTGGTTCGCCTCGGATCAGCCGAAATTCTGCGGGAACTTTCGAAATGAAGCAACTTTGCGTGTGTCTTTCAAGCTCCTCTTAGCCTCGCTGTGCTTTCGCATATTAGCCAAGTTGTTGGAATCGTCCCACGCTTGGCTCGGAGCCTCCACCTCCAGTATAGCAGCTGACTACTCGAGCCTGCTGAAGCTGAAGGCGCCCACGTGGACGCGGCAAGAGCTCCAGGAGGCGATCGAGGCCGTGGTCACGCAGAAGATGCGCTTCACCCAGGCCTCGAGCAAGTACGGCATTCCCAAGGGCACGCTCTACGACAACATACTCGGCAAGTCCAAGAGGATGATGGTCCTCGAGGAGGCGGCCCTGGACCAGCAGGAGGAGCAGGCGGTCCTCGAGTTCTGCTGCGACATCAGCGTCAGCCCCTACAATCGCAGGACCAAGAAGTCACTCAACGCGATACTCAACTTCGTGGAGAAGCTCAGGCGCCAGCGGGATCCGGCTTTTGCGTTCACGGGCCTGTCGGGCTTCAGATGGTGGTGGGCTTTTTGCAAGAAGCACGGCATTGTCTCGCTGTACTTTAACGACGAGAACGACAACGAATGA
- Protein Sequence
- MLGLLWRLQQQQPCWFASDQPKFCGNFRNEATLRVSFKLLLASLCFRILAKLLESSHAWLGASTSSIAADYSSLLKLKAPTWTRQELQEAIEAVVTQKMRFTQASSKYGIPKGTLYDNILGKSKRMMVLEEAALDQQEEQAVLEFCCDISVSPYNRRTKKSLNAILNFVEKLRRQRDPAFAFTGLSGFRWWWAFCKKHGIVSLYFNDENDNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01219003;
- 90% Identity
- -
- 80% Identity
- -