Euro001005.1
Basic Information
- Insect
- Eupelmus urozonus
- Gene Symbol
- bab1
- Assembly
- GCA_900480035.1
- Location
- UELX01001777.1:21938-27717[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-17 1.8e-14 53.7 0.0 1 43 28 71 28 73 0.95 2 2 2.6 1.8e+03 -0.7 0.5 6 15 152 161 148 164 0.87
Sequence Information
- Coding Sequence
- ATGTGGCAAAAGTGCTGGAACACCAATCAGAGCCTAGTGCACAATCTTCGCTTTCGAGAGCGTGGCCCTTTGAAGTCCTGGCGACCGGAAACGATGGCGGAAGCAATTTTTAGCGTACTCAAAGAAGGTCTATCACTCAGCCAGGCCGCaagGAAATACGATATTCCATACCCGACGTTCGTACTTTACGCGAACCGAGTCCATAACATGCTCGGGCCGAGCGCCGACGGTGGAGCCGGTAAGTATTTGCGGCCAAAGGGTAGGGGGAGGCCTCAGAGGATTCTGCTGGGCATCTGGCCGGACGAGCACATCCGCGGCGTGATTCGAGCAGTGGTCTTCCGCGACGGGCACTCGCCCCACATGGTCAAGGAGGAGCCGACCACCATGTATCCCGCCTTGGCGAATTACGGCGCCTGCAACGGACCCGAGGGAGCAGTCAGCCCCAGCGCAGCTGCCGCCGCGGTCGCCGCCGTCGCTCAAGGTCTCCGGCACCAGATGTGCAGCATGGTGGCAGCGGCCCACTCCCAGCAGCACGACATGATGGCGACGAATCTCTCGACAAGCCTATCCTCGAACCTCTCCTCGAACCTGCAGGCGGCGATGCAGCAggcgagccagcagcagcagcaacaccagcagcagcagcaacagcagcagcaacagcaacagcagcagcagcagcagcatcaccaTCAGCAACCGGCGCATCACCACCACCatcacaacaacaacaacaacagcggcATGAATCCGGGCGCGGGAACGCCCGGTCACAGCAACAACGGCAACTCGCCCCTGAACCTCGGACTGGCGAGTCCCGGCTCGGCTGGGCCACCCGAGAGCCCCATGGAGTCGCCGCTTGCCAGTCCCCTCGGCTCGCTCATGGACCCGTCTCACCTGCCGCCAAGCGTCGAGGTCGGCATCGGCGTAAGCGGCATGACGTACAAGCCGGCGCGCAGCTTCGTCAGTCCCAGACCCGAGAATCTCTTCCAGGAGGACATCTCCGACCTCGTTAAGAGCTCGCACGCCGCGCTCAAGGAGAAGGAGAAGATCGCCGTTAAACTCGAGCCGCTGACGGACTCGCGGTGCGAATAG
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGAGKYLRPKGRGRPQRILLGIWPDEHIRGVIRAVVFRDGHSPHMVKEEPTTMYPALANYGACNGPEGAVSPSAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMMATNLSTSLSSNLSSNLQAAMQQASQQQQQHQQQQQQQQQQQQQQQQQHHHQQPAHHHHHHNNNNNSGMNPGAGTPGHSNNGNSPLNLGLASPGSAGPPESPMESPLASPLGSLMDPSHLPPSVEVGIGVSGMTYKPARSFVSPRPENLFQEDISDLVKSSHAALKEKEKIAVKLEPLTDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01467006;
- 90% Identity
- iTF_01380520;
- 80% Identity
- -