Basic Information

Gene Symbol
KDM5A
Assembly
GCA_900480035.1
Location
UELX01000374.1:69452-81680[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.8e-25 1.1e-21 77.6 0.0 2 89 128 211 127 211 0.94

Sequence Information

Coding Sequence
ATGGTCTCGAAGCCGCAGCCAGGCGGCGGCAGATACCAGTGCGCCAGCGGCGCAGGGGACATCGGCAACAACACTGCCAGGCGGCAGGCCTTGCTCCAGGAGTGCGCGGCTGCCAGCAGCACGAGCAGCGGCATGCCAGCCCAGCGCGAGGATTTCGAGTTCCTGGTGCCGCCCGAGGCGCCAGTCTTCGAGCCGACCACCGAGGAGTTTCTCGACCCGTTGGGATATATAGCCAAGATCAGGCCGATCGCCGAGAAGTCCGGCATCTGCAAGATCAAACCGCCACCCaACTGGCAACCACCGTTTGCTGTGGATgtagataaattcaaatttactccAAGAATACAAAGGCTAAATGAACTTGAAGCAAAAACTAGGATTAAGCTTAATTTCTTGGATCAAATAGCAAAATTTTGGGAACTTCAAGGATCCTctttaaaaattccattagttgAACGTAAAGCGTTGGATCTATATTCACTCCACAGAATTGTGACAGATGAAGGTGGAATAGAAACTGTTACAAAAGAAAGGAGGTGGGCGAAAATAGCAAATAAGTTAGGCTACCCTTCTGGGCGCAGTGTTGGCAGTATTCTTAAGAGTCATTACGAAAGAATTTTATACCCATTTGACGTCTTTAAACAAGGAAAAACTTTAActgatattaaaattgaacCAGATAGTGATGTGAATGAGAAGAAGGATAGAGACTATAAACCACACGGAATTATATCGCGACAACAAATCAAACCACCACAAGAGAAATTTTCGCGGCGTTCTAAGCGATTTTCAGGGCAAGATGAGAAACAAAATGGATGTCAATCAATTAAACAAGAAGACTGTAAGGAGGAGTTTGATATTGATACCAaggttaatattaaaaaagaatgttttgatACCAAGCCCAATGTTAGAGGTAAAAATGTTGACTGCAAGGATAATGTTAaagGCAAAAACTCACATGACACCAAGGACTGTATTAAAACGAGAGGTGCAGCAGCTGAAAAAGATAAAGAGAACAgtaaagaacttaaaaaattgcAGTTCTATGGAGCTGGACCCAAAATGGCTGGCTATAATACCAAAGAAACAAAATCACAAAAAGCATCAAATAAAACGAGAGGGGTCAAGCTAGTCTATGAATTCGATCcaCTTGCTAAATACATTTGTCATAATTGTGGCAAGGGAGATAATGAAGAAAACATGTTACTTTGTGATGGATGTGATGATAGCTATCATACATTCTGTTTGTTACCACCATTGACAGAAATCCCTAAAGGAGACTGGCGATGTCCCAAATGCGTTGCTGAAGAAGTATCAAAACCAATGGAAGCCTTTGGATTTGAACAAGCACAAAGAGAATACACGTTACAACAGTTTGGAGAAATGGCAGATCAGTTTAAAAGTGACTACTTTAACATGCCCGTCCATATGGTACCAACTGAGTTAGTAGAAAAGGAGTTTTGGAGAATAGTATCATCCATCGATGAAGATGTTACTGTTGAATACGGAGCTGACTTACACACAATGGATCATGGATCTGGCTTTCCGACAAAAACAAGTGTCAATCTTTTTACCTGTGACCAAGAATATGCAGAGTCTTCCTGGAACTTGAACAATTTACCAGTATTGCGAGAGAGCGTTCTTGGACATATAAACGCTGATATCAGTGGAATGAAAGTCCCATGGATGTATGTAGGAATGTGCTTTGCGACCTTCTGTTGGCACAACGAAGACCATTGGAgctattctattaattatttacattgggGTGAACCAAAAACGTGGTATGGTGTACCGGGATATGAAgctgaaaagtttgaaaaatctatGAAGTCTGCTGCACCAGAGCTTTTCCATAGTCAGCCAGATTTGCTTCATCAATTAGTAACCATAATGAATCCTAATATTCTTACCAGTGAAGGTGTACCAGTATATAGAACAGACCAGCATGCTGGCGAGTTTGTGGTTACATTTCCTCGAGCCTATCATGCAGGTTTCAATCAGGGCTACAATTTTGCTGAAGCTGTAAATTTTGCTCCTGCAGATTGGttgCAGATAGGCAGAGAATGTATTACACACTACTCGAATCTCAGACGGTTTTGTGTTTTTTCCCATGATGAATTAGTTTGCAAAATGTCTTTGGAGCCAGAAACTCTGGATATTGGGATTGCTGCTGCAACATATCATGACATGTTGACTATGGTTGAGGAAGAAAAGAAACTGAGGAAAAATCTGCTAGAATGGGGTGTAACCGAAGCTGAACGTGAGGCCTTTGAACTTTTGCCTGACGACGAGAGGCAGTGCGAGGCATGTAAGACTACATGTTTCTTGAGCGCTGTGACCTGCTCGTGTCACAAATCACAGTTAGTCTGCTTAAGACACTATACTGATCTCTGCGAATGTCCTCCTGAGAAGCACACGTTGAGATATAGATACACGCTAGACGAACTTCCAATCATGTTGCAAAAGCTCAAGTTGAAAGCTGAGTCATTTGACTCGTGGGCGAGTAAGGTTAAGGAGGCAATGGATCCAAAGGGAGAAAAAATAGAACTTAATAAACTGAAGGAACTATTGGATGAAGCAGAAACTAAAAAGTTTCCAGAAAGTGAATTACTTACTGCCTTAACAACTGCTGTTCAAGATGCCGAAAAATGTGCTAGTGTCGCAAGGCAGTTATTGAGTAACAAGCAGAGAacaagAACAAGACAGTCTGTAGATGCCAAATTCAAGCTTACAGTTGAAGAACTAACCTTATTTCATCAAGAAATAACTAATCTTTGCTGTGAACTGAAGGAAGCAGATggtgttaaatttatattagatcAAGTGCTTCAATTCCAAAAGGACGCTGAGGAATTAGAAGTTCAAGAAGCAGATTGCGACCTCgataaacttgaaaaatgtattgAGTATGGAGATTCAATTTGTATCGAGTTACCACAACTTTCACGATTAAAACAGAAATTACAACAATTGCGGTGGTTAGAAGAGGTTAAGTCTAtacaagaagaagaaaaatctgTAACAAGACAAGACCTAGGGAGGCTTATAGAAGATGGAATGAATATTCCAGCTCATTCATCTATTGAAAATGCATTAGCTCAGATGCAGGCGCTAATGATCAGTATTGATGATTGGGAAGATAAAGCTAAACTTTATCTTCAAGCATCTAAAAACAGGCAAACAATTGCAGCTGTTGAAGAACTTATTAAAGAAGCAGACAAGATAGATGCATATTTACCAGGACTGTCTAGCCTAAAGGATGTTTTAAATAAGGCTAAGAATTGGACCAAAACGGTTGAAGAAATTCAAGCTAGAGAGCAGTTTTCATATTATGATACTTTAGATGAATTAGTACGCAAAGGTAGAACTATACCTATCCATCTTGCAGCTTTGCCAGTTCTCGAATCAACTTTGGCACAAGCAAAAGTATGGAAAGAACGAACAGCTAGAACATTCCTCAGAAAGAATTCTCATTACACACTGATGGAAGCATTATCACCCAGAATTGGTGTTGGATTACATGCGATGAAGTCTCGTAAAGATTCTATTGGATCAGTCTATGTTTGTGATACCAAATTGGATGATTCAAATGATTCGGCGACAGTTGTAGCTGCCTTCAAACTAGCAGAACAACGTGAAATGGAAgctatgaaaaatttaagagaaaGGAATGTTAATAAAATGCAGGCTGATGATTCAAGGTTTTGCGTATGCCGCCGAGCGAAATTTGGTCAGATGTTACGCTGTGAACTTTGCAAGGATTGGTTCCATAcaaactGTGTTCCCGTTCCAAGAACTCCATATAAAGGCAAACAACAAAACTCGCAACACACCAAATTTTTATGCCCATGTTGCTTACGTTCACGAAGGCCACGTTTAGAAACAATCTTATCACTTTTAGTAAGTCTTCAGAAAATTCCTGTTCGTTTACCAGAAGGTGAAGCCTTACAATGTCTTACAGAACGTGCTATGAACTGGCAGGACCGAGCAAGGCAAGCTTTGTCTGCTGAAGAAGTATCATCTGTTCTGGCGAAACTTAGTGCAATGTCACAAAAAATGACGGAAGCAGCTGATAGAGAAAAATCTGAAAAGATTATAAGCACTGAATTGAAGAAGGCTGCGAACAATCCAGAGCTTCATCAAAGAGTTCAAGCTCTCGCTTCAATGAGTGGTGTACATTCTGATGATAGTGTTATTAGTATCCCGgatGACGAGGACAGGATggatgacgatgatgatgagATCGATAGCGACGATGACGTTTTAACTATTGATGAAGATGAGCCAAGTAGTAGTAATGCATTTAACAGTAACGAACATGCGTATTCATCAGCGTCAAAATTCCCTTCAAAATCCTCAGGTACCGATGACAAAGATAAAACCGTAACGCTATCCAGCAGTACAACAGCGCGCTTGGAAGAATTGATGATGGAAGGTGATCTTTTAGAAGTGGCTTTAGATGAGACTGAGCACATTTGGCGGATTCTTAGTCGAACATGCACGACGTCTAATAGCATACGCAGGTATGCACCACTGGACCAATCACCTGTCAGCGATTCCAAGGAGCCGAAGAAAACACCCCAACCAAGAGGACGCAAACGAAAGTCGGATGAATTTGAAGCGATGAGAAAATTCGGTCGACAAAGGGTTGATGAAAAACCTGTAGTGAAGCGCAAGGGATTGACTAAAGAGGTGAAATCAGCAGCGCCAACTGGACCAGTGAAGCGCGGACCTCGCAagATGAAACGAAAAGACAGCGACGAAGGTCCCAAAAGAAGAACAGGAAATAGAAAGAAAACCAAACAAGATACTTCTGATGAAGAGGAAGATTGCGCTGCCGGTAACTGCCTGAGACCTAATGgacgCGAAGTAGACTGGGTGCAATGCGACGGAGGGTGCAATGGTTGGTTCCACATGCATTGCGTTGGTCTGGACCGTACAGAACTTGCCGAAGAGGACGATTATATTTGCAGTAATTGCAATGACGGCGACGTGAACTCATCGAGTCAACAGGATTATCACTCGTCTCAATCGTCACACGCCGAGCTGACTGACGAGGAAGACGAGTTGGAAATGGACGTGCAAGAAACGGTCAGCATCATTAGGATCTATTAG
Protein Sequence
MVSKPQPGGGRYQCASGAGDIGNNTARRQALLQECAAASSTSSGMPAQREDFEFLVPPEAPVFEPTTEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTDEGGIETVTKERRWAKIANKLGYPSGRSVGSILKSHYERILYPFDVFKQGKTLTDIKIEPDSDVNEKKDRDYKPHGIISRQQIKPPQEKFSRRSKRFSGQDEKQNGCQSIKQEDCKEEFDIDTKVNIKKECFDTKPNVRGKNVDCKDNVKGKNSHDTKDCIKTRGAAAEKDKENSKELKKLQFYGAGPKMAGYNTKETKSQKASNKTRGVKLVYEFDPLAKYICHNCGKGDNEENMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTELVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRESVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGYEAEKFEKSMKSAAPELFHSQPDLLHQLVTIMNPNILTSEGVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLQIGRECITHYSNLRRFCVFSHDELVCKMSLEPETLDIGIAAATYHDMLTMVEEEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHKSQLVCLRHYTDLCECPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWASKVKEAMDPKGEKIELNKLKELLDEAETKKFPESELLTALTTAVQDAEKCASVARQLLSNKQRTRTRQSVDAKFKLTVEELTLFHQEITNLCCELKEADGVKFILDQVLQFQKDAEELEVQEADCDLDKLEKCIEYGDSICIELPQLSRLKQKLQQLRWLEEVKSIQEEEKSVTRQDLGRLIEDGMNIPAHSSIENALAQMQALMISIDDWEDKAKLYLQASKNRQTIAAVEELIKEADKIDAYLPGLSSLKDVLNKAKNWTKTVEEIQAREQFSYYDTLDELVRKGRTIPIHLAALPVLESTLAQAKVWKERTARTFLRKNSHYTLMEALSPRIGVGLHAMKSRKDSIGSVYVCDTKLDDSNDSATVVAAFKLAEQREMEAMKNLRERNVNKMQADDSRFCVCRRAKFGQMLRCELCKDWFHTNCVPVPRTPYKGKQQNSQHTKFLCPCCLRSRRPRLETILSLLVSLQKIPVRLPEGEALQCLTERAMNWQDRARQALSAEEVSSVLAKLSAMSQKMTEAADREKSEKIISTELKKAANNPELHQRVQALASMSGVHSDDSVISIPDDEDRMDDDDDEIDSDDDVLTIDEDEPSSSNAFNSNEHAYSSASKFPSKSSGTDDKDKTVTLSSSTTARLEELMMEGDLLEVALDETEHIWRILSRTCTTSNSIRRYAPLDQSPVSDSKEPKKTPQPRGRKRKSDEFEAMRKFGRQRVDEKPVVKRKGLTKEVKSAAPTGPVKRGPRKMKRKDSDEGPKRRTGNRKKTKQDTSDEEEDCAAGNCLRPNGREVDWVQCDGGCNGWFHMHCVGLDRTELAEEDDYICSNCNDGDVNSSSQQDYHSSQSSHAELTDEEDELEMDVQETVSIIRIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00309292;
90% Identity
iTF_00690878; iTF_00689947;
80% Identity
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