Basic Information

Gene Symbol
KDM5A
Assembly
GCA_900480025.1
Location
UDEW01000912.1:46732-59034[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.5e-25 8.7e-22 77.7 0.0 2 89 127 210 126 210 0.94

Sequence Information

Coding Sequence
ATGGTGTCGAAGCCGCAGCCAGGCGGCGGCAGATACCAGTGCGCCAGCGGCGCAGGGGACATCGGCAATAACACTGCCAGGCGGCAGGCCTTCCTCCAGGAGTGCGGGGCCGCGAGCAGCACGAGCGGCATGCCAGCCCAGCGCGAGGACTTCGAGTTCAGGGTGCCGCCCGAGGCGCCAGTCTTCGAGCCGACCACCGAGGAGTTCCTCGACCCGCTCGGCTACATAGCCAAGATCCGGCCGATCGCCGAGAAGTCCGGCATCTGCAAGATCAAACCGCCACCCAACTGGCAACCACCATTTGCTGTGGATGTagacaaattcaaatttactcCAAGAATACAAAGGCTGAATGAGCTTGAAGCAAAAACTAGGATTAAGCTTAATTTCTTGGAtcaaatagcaaaattttggGAACTTCAAGGATCctctttaaaaattccattagtTGAACGTAAAGCGTTGGATCTATATTCACTCCACAGAATTGTGACAAATGAAGGTGGAATAGAAACTGTTACGAAAGAAAGGAGGTGGGCGAAAATAGCAAATAAGTTAGGCTACCCTTCTGGGCGCAGTGTTGGCAGTATTCTTAAGAGTCACTacgaaagaattttatacCCATTTGACGTCTTTAAACAAGGAAAAACTTTAACTGATattaaaattgaacCGGATAGTGATGTGAATGAGAAGAAGGATAGAGACTATAAACCACATGGAATTATATCGCGACAACAAATCAAACCTCCACAAGAGAAATTTTCGCGGCGTTCTAAGCGATTTTCAGGGCAAGATGAGAAACAAAATGGATgtcaatcaattaaacaagAAGACTGTAAGGAGGAGTTTGATATCGATACCAaggttaatattaaaaaagaatgttttgatACCAAGCCCAATGTTAGAGGTAAAAATGTTGACTGCAAGGATAATGTcaaagGCAAAAACTCACATGACACCAAGGACTGTATTAAAACGAGAGGTGCAGCAgctgaaaaagataaagagaACAGtaaagaacttaaaaaattgcagtTCTATGGACCTGGACCCAAAATGGCTGGCTTTAATACCAAAGaaacgaaacaaaaatcaaataaaacgaGAGGGGTCAAGCTAGTCTATGAGTTCGATCCACTTGCTAAATACATTTGTCATAACTGTGGCAAGGGAGATAATGAAGAAAACATGTTACTTTGTGATGGATGTGATGATAGCTATCATACATTCTGTTTGTTACCACCATTGACAGAAATCCCTAAAGGAGACTGGCGATGTCCCAAATGTGTTGCTGAAGAAGTATCAAAGCCAATGGAAGCCTTTGGATTTGAGCAAGCACAAAGAGAATACACATTACAACAGTTTGGAGAAATGGCAGATCAATTTAAAAGTGACTACTTTAACATGCCCGTCCATaTGGTACCAACTGAGTTAGTAGAAAAGGAGTTTTGGAGAATAGTATCATCCATCGATGAAGATGTTACTGTTGAATACGGAGCTGACTTACACACAATGGATCATGGATCTGGCTTTCCAACAAAAACAAGTGTCAATCTTTTTACCTGTGACCAAGAATATGCAGAGTCTTCCTGGAACTTGAACAATTTACCAGTATTGCGAGAGAGCGTTCTTGGACATATAAACGCTGACATCAGTGGAATGAAAGTCCCGTGGATGTATGTAGGAATGTGCTTTGCGACCTTCTGTTGGCACAATGAAGATCATTGGagttattctattaattatttacattggGGTGAACCAAAAACGTGGTATGGTGTACCGGGATATGAAGctgaaaagtttgaaaaatctatGAAGTCTGCTGCACCAGAGCTTTTCCATAGTCAGCCAGATTTGCTTCATCAATTAGTGACCATAATGAATCCTAATATTCTTACCAATGAAGGTGTACCAGTATATAGAACAGACCAGCATGCTGGCGAGTTTGTGGTTACATTTCCTCGAGCCTATCACGCAGGTTTTAATCAGGGCTACAATTTTGCAGAAGCTGTAAATTTTGCTCCTGCAGATTGGttgCAGATAGGCAGAGAATGTATTACACACTACTCGAATCTCAGAcgattttgtgttttttccCATGATGAATTAGTTTGCAAAATGTCTTTGGAGCCGGAAACACTGGACATTGGAATTGCTGCTGCAACATATCATGACATGTTGACTATGGTTGAAGAAGAGAAGAAACTGAGGAAAAACCTGCTAGAATGGGGTGTAACCGAAGCTGAACGTGAGGCCTTTGAACTTTTGCCTGACGACGAGAGGCAGTGCGAGGCATGTAAGACTACATGCTTTTTGAGCGCAGTGACCTGCTCGTGTCACAAATCACAGTTAGTCTGCTTAAGACATTATACTGATCTCTGCGAATGTCCTCCTGAAAAGCACACTTTGAGATATAGATATACACTAGACGAACTTCCCATCATGTTGCAAAAGCTCAAGCTGAAAGCTGAGTCATTCGACTCGTGGGCGAGTAAGGTGAAGGAGGCAATGGATCcaaagggagaaaaaataGAACTTAATAAACTGAAAGAACTATTGGATGAAGcagaaactaaaaagtttCCAGAAAGTGAATTGCTTACTGCCTTAACAACTGCTGTTCAAGATGCCGAAAAATGTGCTAGTGTCGCAAGGCAGTTATTGAGTAACAAGCAGAGAACCagaaCAAGACAGTCTGTAGATGCCAAATTCAAGCTTACAGTTGAAGAACTAACCTTATTTCATCAAGAAATAACTAATCTTTGCTGTGAACTGAAGGAAGCAGATggtgttaaatttatattagatCAAGTGCTTCAATTCCAAAAGGATGCTGAGGAATTGGAAGTTCAAGAAGCAGATTGTGACCTcgataaacttgaaaaatgtattgagtACGGAGATTCAATTTGTATCGAGTTACCACAACTTTCACGATTAAAACAGaaattaCAACAATTACGGTGGTTAGAAGAGGTTAAGTCTAtacaagaagaagaaaaatctgTAACAAGACAAGATCTAGGGAGACTTATAGAAGATGGAATGAATATTCCAGCTCATTCATCTATTGAAAATGCATTAGCTCAGCTGCAGGCACTAATGATCAGTATTGATGATTGGGAAGATAAAGCGAAACTTTATCTTCAAGCCTCTAAAAACAGACAAACAATTGCAGCTGTTGAAGAACTTATTAAAGAAGCAGACAAGATAGATGCATATTTACCAGGACTGTCTAGCCTAAAGGATGTTTTAAATAAGGCTAAGAATTGGACCAAAACGGTTGAAGAAATTCAAGCTAGAGAGCAGTTTCCGTATTACGATACTTTAGATGAATTAGTACGCAAAGGTAGAACTATACCAATCCATCTTGCAGCTTTGCCAGTTCTCGAATCAACTTTGGCACAAGCAAAAGTATGGAAAGAACGAACAGCTAGAACATTCCTCAGAAAGAATTCTCATTACACCCTGATGGAAGCACTATCGCCCAGAATTGGTGTTGGATTACATGCGATGAAGTCTCGTAAAGATTCTATTGGATCAGTCTATGTTTGTGATACCAAATTAGATGATTCAAATGATTCGGCGACAGTTGTAGCTGCCTTCAAACTAGCAGAACAACGTGAAATGGAagctatgaaaaatttaagagaaaggaatgttaataaaatgcaaGCTGATGATTCAAGGTTTTGCGTATGCCGTCGAGCGAAATTTGGTCAGATGTTACGCTGTGAACTTTGCAAGGATTGGTTCCACAcaaaCTGTGTACCTGTTCCAAGAACTCCATATAAAGGCAAACAACAAAACTCGCAACACACCAAATTTCTATGCCCATGTTGCTTGCGTTCACGTAGGCCACGATTAGAAACGATATTATCACTTTTAGTAAGCCTTCAGAAAATTCCTGTTCGTTTACCAGAAGGTGAAGCCTTACAATGTCTTACAGAACGTGCTATGAACTGGCagGACCGAGCAAGGCAAGCTTTGTCTGCTGAAGAAGTATCATCTGTTCTGGCGAAACTCAGTGCAATGTCACAAAAAATGACGGAAGCAGCTGACAGagaaaaatctgaaaagaTTATAAGCACTGAATTGAAGAAGGCTGCGAACAATCCAGAGCTTCATCAAAGAGTTCAAGCTCTCGCTTCAATGAGTGGTGTACATTCTGATGATAGTGTTATTAGTATCCCGgatGATGAGGATAGGATGgatgacgatgatgatgaGATCGATAGCGACGATGACGTTTTAACTATTGATGAAGATGAGCCAAGTAGTAGTGCATTTAACAGTAACGAACATGCGTATTCGACCGCGTCAAAATTCCCTTCAAAATCCTCAGGTACcgatgaaaaagataaaaccgTAACGCTATCCAGCAGTACAACAGCGCGCTTGGAAGAACTGATGATGGAAGGTGATCTTTTAGAAGTGGCTTTAGATGAGACTGAGCACATTTGGCGGATTCTTAGTCGAACATGCACGACGTCTAATAGCATACGCAGATATGCACCACTGGACCAATCACCTGTCAGCGATTCCAAGGAGCCGAAAAAAACACCCCAACCAAGAGGACGCAAACGAAAGTCTGATGAATTTGAAGCGATGAGAAAATTCGGTCGACAGAGGGTAGATGAAAAACCTGTAGTGAAGCGCAAGGGATTGACAAAAGAGGTGAAATCACCAGCGGCAACTGGACCAGTGAAGCGCGGACCTCGCAagATGAAACGAAAAGATAGTGACGAAGGTCCCAAAAGAAGAACAggaaatagaaagaaaacCAAACAAGATACTTCTGATGAAGAGGAAGATTGCGCTGCTGGTAACTGCCTGAGACCTAATGgacGCGAAGTAGACTGGGTGCAATGCGACGGAGGGTGCAATGGTTGGTTCCACATGCATTGCGTTGGTCTGGACCGTACAGAACTTGCCGAAGAGGACGATTATATTTGCAGTAATTGCAATGACGGCGACGTGAACTCATCGAGTCAACAGGATTATCACTCGTCTCAATCGTCACACGCCGAGCTGACTGACGAGGAAGACGAGCTGGAAATGGACGTGCAAGAAACGGTCAGCATCATTAGGATCTATTAG
Protein Sequence
MVSKPQPGGGRYQCASGAGDIGNNTARRQAFLQECGAASSTSGMPAQREDFEFRVPPEAPVFEPTTEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTNEGGIETVTKERRWAKIANKLGYPSGRSVGSILKSHYERILYPFDVFKQGKTLTDIKIEPDSDVNEKKDRDYKPHGIISRQQIKPPQEKFSRRSKRFSGQDEKQNGCQSIKQEDCKEEFDIDTKVNIKKECFDTKPNVRGKNVDCKDNVKGKNSHDTKDCIKTRGAAAEKDKENSKELKKLQFYGPGPKMAGFNTKETKQKSNKTRGVKLVYEFDPLAKYICHNCGKGDNEENMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTELVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRESVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGYEAEKFEKSMKSAAPELFHSQPDLLHQLVTIMNPNILTNEGVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLQIGRECITHYSNLRRFCVFSHDELVCKMSLEPETLDIGIAAATYHDMLTMVEEEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHKSQLVCLRHYTDLCECPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWASKVKEAMDPKGEKIELNKLKELLDEAETKKFPESELLTALTTAVQDAEKCASVARQLLSNKQRTRTRQSVDAKFKLTVEELTLFHQEITNLCCELKEADGVKFILDQVLQFQKDAEELEVQEADCDLDKLEKCIEYGDSICIELPQLSRLKQKLQQLRWLEEVKSIQEEEKSVTRQDLGRLIEDGMNIPAHSSIENALAQLQALMISIDDWEDKAKLYLQASKNRQTIAAVEELIKEADKIDAYLPGLSSLKDVLNKAKNWTKTVEEIQAREQFPYYDTLDELVRKGRTIPIHLAALPVLESTLAQAKVWKERTARTFLRKNSHYTLMEALSPRIGVGLHAMKSRKDSIGSVYVCDTKLDDSNDSATVVAAFKLAEQREMEAMKNLRERNVNKMQADDSRFCVCRRAKFGQMLRCELCKDWFHTNCVPVPRTPYKGKQQNSQHTKFLCPCCLRSRRPRLETILSLLVSLQKIPVRLPEGEALQCLTERAMNWQDRARQALSAEEVSSVLAKLSAMSQKMTEAADREKSEKIISTELKKAANNPELHQRVQALASMSGVHSDDSVISIPDDEDRMDDDDDEIDSDDDVLTIDEDEPSSSAFNSNEHAYSTASKFPSKSSGTDEKDKTVTLSSSTTARLEELMMEGDLLEVALDETEHIWRILSRTCTTSNSIRRYAPLDQSPVSDSKEPKKTPQPRGRKRKSDEFEAMRKFGRQRVDEKPVVKRKGLTKEVKSPAATGPVKRGPRKMKRKDSDEGPKRRTGNRKKTKQDTSDEEEDCAAGNCLRPNGREVDWVQCDGGCNGWFHMHCVGLDRTELAEEDDYICSNCNDGDVNSSSQQDYHSSQSSHAELTDEEDELEMDVQETVSIIRIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01488318;
90% Identity
iTF_00692691;
80% Identity
iTF_00690878;