Basic Information

Gene Symbol
TRERF1
Assembly
GCA_030522745.1
Location
JAPYZB010000759.1:12390-18000[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.6e-09 1.2e-05 27.4 0.1 2 46 635 679 634 679 0.96

Sequence Information

Coding Sequence
ATGATAAATCACTTaataaatcactttaaaaatcttgtaaaaaatcATACGATTAGTCAGATACTTATTTATgccaaaaacattttaaatatagtaattgTTTATCAATTATTCGCCAGCTACTTTACTGAGACTTTATTACTGCTGCAAGACCAGTCGGGCAACGAGGCCCTCCAGGACATCAACCTTGAGGAGCGCTTCTCCTCGCAGCACACCGTCAACCCCGACCTCCAGGCCCTCGTCAACTCACCCCTGCCCGACTCGCTCGCCGAGTTCAGCACCTACGGAGCCAACTACAACGACGGCTCGCACACTCTGCCCAGCCAGTCACCCCTCCCCTCACCGCTCACCCGACACGACAGCCCGAGCTTCACCTACCCAACGCCACCCGCCAGCCAAGAGGGCCTGCTCAGCGGCAGCCTGCCCCTGCTCAGTCCCCAGGAGGACAGCGACGCCGTGCACTCCGTCTCCTCGCCCCTCTCCGCCGCCTTCTACAGCACGAGCATGTCCTCGGCGGCGGCGATCGAGGAGGCTCTCAGCGAGGTCCTGCCCGACGAGGCCGACGCCGACGGTGCCGATCTCTACGGCTCCGGCTGCCCCAACCCCCACTCGCCCCTGCCGAGCCCGCTCTCGGCCACGCCGGCGCCCTCGCCGCTCTCCTCCCTGCCGCCGTCCTCGGTCTCCTCGCCCGGGCCAGGCAGCTTCACCACCTCGAGCTTTCCCATGTCGCCCCACCACACGCTCCAGAACCAGATGATGCCCAACTCGGAGGACCCGCTGCTCTCCTCCAGTCCCAAGGACTTCGGGGCCGGCAGGCGCAAGTTCGAGTTCCAGTCGTACAAGCTCATCACCAATCAGAATCTCGTTGACTTCGGCCTGGGCAACGGCAGCGTCGCCGGCATCGTCGTCGACAACAACGGCGAGTTCAAGCTCATCCAGACGGCCGGCCTGCAGAAGGCGAACGTCTACGTGCAGGCGGGAGCTTTGAGTCCAGCGCTGGCCTTCAGGAAGGAGATATGCCTGACCGGGCCGAAGCTCGAGCAGGGCAACGTCAACGTCAACGTCAACCTGGTCAACGGCCAGGGCATAAATCTGCCCAATCACGTTTACCAGCAGGCGCAACTCCATCAGGCGATAAACCCGGCCAAGTTCCTCATCCAGACGAACCAGGCCGGCAAGCCCAACCTCAAGCACAAGGCCAGCAACGGGCTGCCCATACCCGTCGAGCAGATCAAGGAGGAGGAGTCCCTGGACGAGGACGTCTTCCTCAGTCCCAGCAGCGTGCCGATGGCCTCCTCGGGCAGTCCGGCGCGCTGCCACAAGAAGCGGCCGCGCCTCGACGGCCCGGCCCTTGGACAGCACAACGGCAGCGGCTCGTCAGCCATAAACGGCTCGTACTCCTACCCGTCGAGGCTGCGTCGCGCCTGCGATCGGCACTGGGACAGCAGCTACACGCCGCCGCCGATACTCGACCCCTCGAGGCCGGGGCCCGGACTCTACGCCAGGCTACACCAGAACGAACGGGATTCCGCGGAATTTAGTTCTGACGACTCGCAGGGCAATGACGGACCCCCGCCCAGGATCAATATCGGCACGAGGTACCAGGCGACGATACCCCAGTTTGTGGAGCCGGAGGTGGACAGGCTGGCAGCTGACCCGGAGACGGATCATTTGCTCTGGGACCCTGGCATCGATAGTGCCCTCACCGAAACTGAACTGGAGATGTATCTGCAATTTGCCTGCTGCGCTGCTGTCCCTGGCGGCGGAAGAAACAAAGAGTATGCCCTTCACCTTTTACACATGTGTAGGGGCAATATTCGCGAGGCGATGCTAAAACTGATGCGGCCAACTTCGGCCCTAGCGTCGGAGCATCCGTACCTGCGCTACGAGTGCCACGAGTCAGAGCGCTGGACGTCCCACGAGATGGACGCGTTCTACCAGGGCCTGCTCAAGTACAACAAGGACTTCTCGGCGATAGCGCGCGACATCGGCAGCAAAAATAGCCGGCAGTGCGTGCAGTTCTACTATCTCTGGAAACGGCTCTGTCCCGACGAGTACAAGAGGCTGCGGCTGCGCTACGGCAAGCCCAAAGTCAAGCCCGAGCTTAACGGCTACGGCAGCAGGGACAGCAAGGACACGAGGGAACTGCAGGAGGCGATCGCATCGGTCACGGAGCTGGACTTCAGCGAAGGAAAGTCCATTCTCCATCGGACTCTGATGCAGACGACGAATGAAAGAGAGAACTCTGCCACTCTGACAACGAGCGACGGTGAATTGCGACTTTTCGCTTACGATTGTCAAGATAGCTTTAGCGGGAGCGTAACAGTAACGATGCCGGCCGGGAGCTGTGCCCGAATAGGCCGCGCACAGGCGGCCCCCAGCTGCCACGCCGGCAATCCTGCCGGtggggctgctgctgccgccgccagCGGCTTAGCCACAGTCGACCACACCAACTCACAAACTCACACTAGTACCGAGCAACAACTACCCGCGCCCACCCCACTTCACTACCCCTGCAAGATTTGCGGGAAAGTGTTCAACAAAGTGAAAAGCAGAAGTGCACACATGAAGTCTCATCGGCCAATGCCCACGCCCGATTCAACGGCACAGGAATCTAGGAAACAACAGCAGCAAGCGCAACAGCTGCAAAACAGCATTCAACACGTTCAAGCGAATCAGCATCAGCATCAGCATCAGCATCAGCATCAGCATCAGCAGCAACTTAGCAGCGTGCAAATGCAAATTCAGCAGCATCCCCAGCAGCTGATTCATCCGCAGGATTACCAGCAGCAGCATCAACATCAGCAGCAacttcagcagcagcagcagcaacaatgTCAAATAACTCCGACGAATTGCGACGTTCAAACGAGCCACGTTTGGCACAATCCGCCGAGGCTTCGACCGCCATAG
Protein Sequence
MINHLINHFKNLVKNHTISQILIYAKNILNIVIVYQLFASYFTETLLLLQDQSGNEALQDINLEERFSSQHTVNPDLQALVNSPLPDSLAEFSTYGANYNDGSHTLPSQSPLPSPLTRHDSPSFTYPTPPASQEGLLSGSLPLLSPQEDSDAVHSVSSPLSAAFYSTSMSSAAAIEEALSEVLPDEADADGADLYGSGCPNPHSPLPSPLSATPAPSPLSSLPPSSVSSPGPGSFTTSSFPMSPHHTLQNQMMPNSEDPLLSSSPKDFGAGRRKFEFQSYKLITNQNLVDFGLGNGSVAGIVVDNNGEFKLIQTAGLQKANVYVQAGALSPALAFRKEICLTGPKLEQGNVNVNVNLVNGQGINLPNHVYQQAQLHQAINPAKFLIQTNQAGKPNLKHKASNGLPIPVEQIKEEESLDEDVFLSPSSVPMASSGSPARCHKKRPRLDGPALGQHNGSGSSAINGSYSYPSRLRRACDRHWDSSYTPPPILDPSRPGPGLYARLHQNERDSAEFSSDDSQGNDGPPPRINIGTRYQATIPQFVEPEVDRLAADPETDHLLWDPGIDSALTETELEMYLQFACCAAVPGGGRNKEYALHLLHMCRGNIREAMLKLMRPTSALASEHPYLRYECHESERWTSHEMDAFYQGLLKYNKDFSAIARDIGSKNSRQCVQFYYLWKRLCPDEYKRLRLRYGKPKVKPELNGYGSRDSKDTRELQEAIASVTELDFSEGKSILHRTLMQTTNERENSATLTTSDGELRLFAYDCQDSFSGSVTVTMPAGSCARIGRAQAAPSCHAGNPAGGAAAAAASGLATVDHTNSQTHTSTEQQLPAPTPLHYPCKICGKVFNKVKSRSAHMKSHRPMPTPDSTAQESRKQQQQAQQLQNSIQHVQANQHQHQHQHQHQHQQQLSSVQMQIQQHPQQLIHPQDYQQQHQHQQQLQQQQQQQCQITPTNCDVQTSHVWHNPPRLRPP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00691032;
90% Identity
iTF_00691032;
80% Identity
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