Eazu002582.1
Basic Information
- Insect
- Eupelmus azureus
- Gene Symbol
- -
- Assembly
- GCA_030522685.1
- Location
- JAPYZA010001031.1:22390-32209[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.00012 0.025 16.7 1.4 1 23 431 453 431 453 0.96 2 17 5.1e-06 0.0011 21.1 1.9 1 20 459 478 459 481 0.94 3 17 4e-05 0.0084 18.2 0.7 1 23 487 509 487 509 0.98 4 17 9.9e-05 0.021 17.0 4.4 1 21 515 535 515 537 0.95 5 17 3e-05 0.0064 18.6 4.6 1 23 543 565 543 565 0.99 6 17 3e-05 0.0064 18.6 5.3 1 23 571 593 571 593 0.97 7 17 1.2e-05 0.0024 19.9 7.1 1 23 599 621 599 621 0.97 8 17 0.0079 1.6 11.0 1.2 7 23 674 690 674 690 0.97 9 17 8.4e-05 0.017 17.2 6.7 1 23 696 718 696 718 0.97 10 17 2.6e-05 0.0054 18.8 5.8 1 23 724 746 724 746 0.98 11 17 6.9e-07 0.00014 23.8 2.9 1 23 752 774 752 774 0.98 12 17 1e-05 0.0021 20.1 7.8 1 23 780 802 780 802 0.98 13 17 3.2e-05 0.0068 18.5 9.1 1 23 808 830 808 830 0.98 14 17 0.18 38 6.7 7.9 1 21 836 857 836 859 0.94 15 17 1.6e-05 0.0032 19.5 0.4 1 23 865 887 865 887 0.98 16 17 0.037 7.7 8.9 4.5 1 23 897 919 897 919 0.98 17 17 6e-07 0.00012 24.0 1.3 1 23 925 947 925 947 0.97
Sequence Information
- Coding Sequence
- atgaatagcGAGCAACATGCTCTGCCAGCGACGACGCAGGCACAACAGGAAGAAGTAAACGCAGGCCAAAGTGGTCGTCCTTCATATCCAGGAGGTCTGGTAACCCCAACTAGCCTTGGCAATGCAGGAAATATTCCGCAATCATCTGCGGACCTGCGTGTAGGTACAGCTGTAGCATTAGCATCTTCGGTAGCTAAGTACTGGTTTCTCACCAATCTCATTCCTGGGCCAATACCCCAGGTGTCAGTGTATCATCACCCTCACCATAGGAACAGTGCTGGTAGTGGAGAGACCCAGACCACCAAAGATTCAGCAACATTGCTGAACCAAGATATGTCATTGACTTCTGGTGCTCATCACCAGACATCGACTGCGCACCACCACCAGCCCTCAGTTAGTAGAAGTAATCACCATAGCTCCATACAGACGAATACACAGATTCCAGTTTCCATTCCAGGATTAACCCTAGATGGAAGTCATCTACAGGCAAGTGTGAACCATCTACAGGCAGCTCATGCTCAGATGCAGCAGCAGATGCAAACACAGCAGCAGGCTCAAttgcatcagcagcagcaggcccAGTCTCATCATCAGATGCAAAATCACCAGAATGCCCAAAGTGCAGCCCAAGTCAACCAGAATCAAAGCTCATCAAGAGAAGATAAAACTAAGGAGGAATCATCGGACCGTTGCAACGAGAATCAGGTACATTCTCACGTTCAGTGTGATCATCAGCATCAGCAAGCACAAGATTTACAACAGAGCCTAATGcatcagcagcaacaacagcagatTGGTGTCACCATTGGTGGTGCTTCCACTTCGGATGGTGCTAATCAAGGTGGAGTTGAAAAGGCTGAGAAAAAGGAGGAAATTCGTCAGCTCAATATGACACAgtTTCAAATACCCGACCTAAAAGCAGGAAGTCACATGATGGATGTACGGACTGCAGATGGatcaattgttaaaatcagCACTGCTAATGATCAGGATCTTGCAAAAACTTTAGGAGTTGATATATCACAATATATCAATAagGGAGCTGGCAACGTGGAAGAGCTGAACCAGATAAACCAGCTGTTGCTTTACCACGAGGTATTCGGCAAACTTCAAAGCGAGATCGCGACAGGCACGACTCTAATTGGTAGCACGGTGCCTACGCAGACCGTTACCACAATACAAAACGGCGCGCCGTTGGTCCAGCAGGTGCAGTTGAATAAGTTCGACATTAAGACGAGCGATGGCGAGGCGACACCTGGACCCAGTGGCTCGCCCGTATCCGTGGGTAGTCATGCCTGCGAGGTCTGCGgcaaaatatttcagtttcgaTACCAGTTGATCGTCCATCGCCGTTACCATACGGAACGGAAACCCTTTACGTGTCAGGTATGCGGCAAAGCATTCACTACCGCATCGGATTTAACCCGTCATGGAAAATGTCACTTGGGTGGTTCCATGTTCACATGTGCGGTCTGCTTCCATGTCTTTGCTAACGCACCGTCGTTAGAACGACATATGAAGCGACACGCTACAGATAAACCGTACAATTGTACCGTTTGTGGAAAAAGTTTCGCAAGAAAGGAACATCTCGATAATCATACGAGGTGTCATACGGGCGAAACTCCTTACAgatgCCAGTACTGCGCAAAAACCTTTACACGAAAAGAGCACATGGTGAACCACGTGCGTAAACACACGGGCGAGACGCCGCATCGCTGCGACATCtgcaaaaaatctttcactCGCAAGGAGCACTTCATGAACCATGTGATGTGGCACACCGGCGAGACACCCCATCATTGCCAGGTCTGCGGTAAAAAATATACGCGTAAGGAACACTTGGCCAATCACATGCGATCCCACACCAATGACACGCCCTTCCGCTGTGAGATATGTGCCAGTCGCCGCGTAGATCCGGAAACTCACGCATTGATGTTCGAAGCGGGCTTTCGCACCCTCAGcctcgagcagcagcagcagcaccgcgATGCCGTCGCCTGCTACCTCGTCAACCTGAGCGgcaAGTCGTTCACGCGCAAGGAGCACTTCACGAATCACATAATGTGGCACACGGGCGAGACACCGCACCGCTGCGACTTCTGCTCCAAGACGTTCACGCGCAAGGAGCACCTACTCAACCACGTCAGGCAGCACACGGGTGAGTCACCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGAGAGACGCCGTTCCGCTGCCAGTACTGTCCGAAAGCGTTCACGCGCAAGGACCACCTGGTGAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACGAAATCCTTCACGCGGAAGGAACATTTGACAAATCACGTGCGTCAACACACAGGCGAGTCGCCCCACCGCTGCCACTTCTGCTCCAAGTCGTTCACCCGCAAGGAGCACCTGACCAATCACGTGCGCATCCACACGGGCGAGTCGCCCCACAGGTGCGAGTTCTGCCAGCGCACCTCGTTCACGAGGAAGGAGCACCTGATCAACCACATGCGCTGCCACACCGGCGAGCGTCCGTTCGTCTGCACGGAATGCGGCAAGAGCTTCCCGCTCAAAGGCAATCTCCTCTTCCACATGCGCTCGCACAACAAGGGCAGCCAGGCCGAGCGTCCGTTCCGCTGCGACCTTTGCCCCAAGGACTTCATGTGCAAGGGCCATCTCGTCTCCCACAGGCGCTCCCATTCGGACGAGCGGCCCCACAGTTGCCCGGACTGCGGCAAGACTTTCGTCGAGAAGGGTAACATGCTGAGACACCTACGCAAGCACGCGGCCGAGGGCCCGCCCACGCAGGTCAGCAGTGCCGCCTCCGCGCTGGCCGGCCAAGCAGCGGCGGCTGCAGTAGCTGCAGCTGCGGCGGCGGGCGCGCCCACGACCGTCCTGCCGATACCAGCGGCCGCGGCGGCTGCAGCGGTGCTGGTCGGTCATCCGCTTGCGCCGCCGCCACCGACGGCCAGCAGCGCGCCGGCTCTGCCGCAGCACACCGTCGTCGTGCCCGCGCCGCCGGGCGTGCTCGCCTCCTACTGA
- Protein Sequence
- MNSEQHALPATTQAQQEEVNAGQSGRPSYPGGLVTPTSLGNAGNIPQSSADLRVGTAVALASSVAKYWFLTNLIPGPIPQVSVYHHPHHRNSAGSGETQTTKDSATLLNQDMSLTSGAHHQTSTAHHHQPSVSRSNHHSSIQTNTQIPVSIPGLTLDGSHLQASVNHLQAAHAQMQQQMQTQQQAQLHQQQQAQSHHQMQNHQNAQSAAQVNQNQSSSREDKTKEESSDRCNENQVHSHVQCDHQHQQAQDLQQSLMHQQQQQQIGVTIGGASTSDGANQGGVEKAEKKEEIRQLNMTQFQIPDLKAGSHMMDVRTADGSIVKISTANDQDLAKTLGVDISQYINKGAGNVEELNQINQLLLYHEVFGKLQSEIATGTTLIGSTVPTQTVTTIQNGAPLVQQVQLNKFDIKTSDGEATPGPSGSPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFTTASDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICASRRVDPETHALMFEAGFRTLSLEQQQQHRDAVACYLVNLSGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTSFTRKEHLINHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSQAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVSSAASALAGQAAAAAVAAAAAAGAPTTVLPIPAAAAAAAVLVGHPLAPPPPTASSAPALPQHTVVVPAPPGVLASY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00286639;
- 90% Identity
- iTF_00692316;
- 80% Identity
- -