Basic Information

Gene Symbol
DMRT2
Assembly
GCA_030522685.1
Location
JAPYZA010000081.1:1-2303[-]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.6 2e+04 -2.7 0.0 33 40 4 11 3 13 0.80
2 3 9.8e-26 1.2e-21 78.0 12.0 1 47 22 68 22 68 0.99
3 3 0.61 7.6e+03 -1.4 0.1 39 46 95 102 93 103 0.84

Sequence Information

Coding Sequence
ATGAAGAACGACTGTGATTCTGTCGACGAACGATTGACATCAGCGCCGTCAACAAGCCGCACGCGCAATCCAAAATGCGCCCGTTGTCGCAATCACGGAATCGTCTCCGGTTTGAAAGGTCACAAGCGTTCATGTGCCTGGAAGGACTGCCGATGCGCGTGCTGCCTCTTGGTGGTGGAACGTCAGCGTGTGATGGCCGCCCAGGTGGCGCTGCGACGGCAGCAGCAGGCTCAGGACAATGTGCTGAGCCAGCCAGCGACGGCCGAGTCGAGCGGAGGCCAGCATAGACAGCGCGCAATGGCAGCCTACCAGCGTAGGCTCAGGAACTTTCAGCGTCACAGGCTTCAGCTCACACAGACGAGAATAAGCGTTACCCAGGATCTGCATATACTCAACGCTCTACCTACAATTCCAG
Protein Sequence
MKNDCDSVDERLTSAPSTSRTRNPKCARCRNHGIVSGLKGHKRSCAWKDCRCACCLLVVERQRVMAAQVALRRQQQAQDNVLSQPATAESSGGQHRQRAMAAYQRRLRNFQRHRLQLTQTRISVTQDLHILNALPTIP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00691963; iTF_00690205;
90% Identity
iTF_00691963; iTF_00690205;
80% Identity
iTF_00690205;