Eann019233.1
Basic Information
- Insect
- Eupelmus annulatus
- Gene Symbol
- -
- Assembly
- GCA_900480025.1
- Location
- UDEW01001909.1:1-5860[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0021 0.19 12.7 6.9 1 21 153 173 153 174 0.96 2 14 0.00035 0.031 15.2 2.0 1 22 191 212 191 214 0.91 3 14 0.082 7.3 7.7 0.7 2 21 223 242 222 243 0.92 4 14 0.0014 0.13 13.2 0.4 1 20 254 273 254 275 0.94 5 14 0.069 6.1 7.9 1.2 1 23 283 306 283 306 0.95 6 14 0.0074 0.66 11.0 1.4 3 21 317 335 316 336 0.95 7 14 0.027 2.4 9.2 3.9 1 23 344 367 344 367 0.95 8 14 3.6 3.2e+02 2.5 3.3 1 21 610 630 610 631 0.93 9 14 0.67 59 4.8 6.6 1 23 639 662 639 662 0.90 10 14 0.00012 0.011 16.6 0.6 1 21 671 691 671 692 0.94 11 14 0.0027 0.23 12.4 1.2 2 23 701 723 700 723 0.95 12 14 7.2e-05 0.0063 17.3 0.7 1 21 731 751 731 752 0.94 13 14 0.056 5 8.2 0.2 2 23 761 784 760 784 0.95 14 14 0.058 5.1 8.1 5.4 1 21 793 813 793 814 0.94
Sequence Information
- Coding Sequence
- gtaaaacatgaatttttcttcaaaaccGAAAATGATAATGACATAAATCACAAAGACAATCAAGCATCAGCAGTATCAACTAGTCAAACATATGATCATCAAAATAgatcaaacataaatttagaaagtgaaagttttattgttgtaaaagAAGAGATTGATGATAACGTAGTAAATAACAACGCAGATTTTTCATGCtctaatacaaatatttcaatttctgcTCCTATTAAAGAAGAAGATCCACTCGACATTATTGATGAAAACGTATCTGAAATTGATACAAatgACATTACTAATGTTAATTTACGAATAAAAACGGAAAACCTTCATGAAGAAAGTTTCACCAAATATAAGAATGAAACTGAAACTAGCATTAACCAGTCAAATCAAACTTTGGCTTCAAAAAGCTCGCCGACGTCGTCAAAGGGCGAGCAATCGACCAGCGAGAAACGATATCCCTGCAAGTATTGCAAGAAGACCTACAAGCACAAGACCCATGCGAGTCGCCACATGAAGCACGAGTGCTGGGTGGCTAGGGTACAGCAGGGCGACACAGACAGGGCGCGTTACAGCTGCGAGCTTTGCAATGCCAACTTCACGTCGAATTACAGCTTGACTCGGCATCGGTTCTTTCTGCACTCGGATGGCCGCCGCAATAAGACTTCATGCGGCGTCTGTCTGAAGCTGTTTTCCTCGCAGAAGTCGCTCGATCATCACCTCAGCAGCAAGAGGTGCGGTGGAGCGCCGGCCAACGAGTTTGTCTGCGGTACCTGCAACAGGCGATACCGCGACATGACGAGCCTGCGTCGCCACGTGAGCAACGAGTGTGGCAAGGAACCGCGCTTTAGTTGCGCACATTGCGACTATCGCAGTCTGCAAAAAATCAATCTGGTCAGGCACCTGGCACGCATGCACGGCACCCAGTTTGATCTGATCAAGGTCGCCTGTCCAAGCTGTTTCAAAGTCTACAAAAACGAGTGTACTCTGAAGCGCCACATACAGTTCGAGTGTGGCAAGAAGCCGTCGTTCGCCTGCAAGCTCTGCAGTTATAAAACCAAACGAAAGGCTTGCCTTACTTCGCACGTTAAGAACTTGCATTCTAAAAAGGAATTGAAGAgAGGTGCTGTAAACAAAACAATTCAGCCTATAGAAGCAGTCCAGATAAAAGTTGAAGACGTTAGTATCTCAGATGAATCATTGATACTTGATACATCTGATGTCTTAAatgaagaagaaaatcGCCACAATGTATTTGAAACAAACCGGACTGATATCGAGTTTATAGATACAGATGCCTTGTACGAAATTTCAGAGAATTTAGataaaataatacaaaataaatttaaaaatacgaaaaaagtactcaaaaataagaaaaaatctgGAATCCAGACTGACAAAGTTGTAACCAcgaaaaaatctgtaaaagaCAGTAACAAAGTTGTAAATAGGAAACAACCGATGAAAGACAGTACCAAAGTTATGAGCGCGAAGAAATCGATAAAAGGCAGTAACAAAGTTGTGAGTACGCAAAAACCGGAAAAAGACAGTGTCAAAGAAATACAAAGACCGATAAAAGGCAGTAACAAAGTTGTGTGTACGCAAACACCGGAAAAAGACAGTGTCCAAGAAACACAAAGACCGATAGAAGACAGAAACGAAATTGTAGataagaaaattctttcaCCAACAAAAATGACGGCAGCaactaaattttATCTACATAACTTGCTAGTATTGTATTGCCAAAAATGCAACGTGGTTCAGAAAAAAGTCTACGGGATGAAGCAGATCAATTGTCAAAAGTGTGATGAGTCTCTACAATACCAGTGTATTAAATGTTCTAAGCGTTACCGTAACTATTGCGACATCACGATGCACCTGAAGTACGACTGCGGTAAACCCAAGGGCTTTTCTTGCAACATATGTGACTACAAGACATCGAGAAAGTGTCGGCTCACTGATCACTGCAAGTCTGTGCATACATTGTATAACCACAAAGATTTGTTCAACTGTGGGGTGTGTGGTAAAACCTTTAAGTTGCTTAAGTATCTCAGATGGCATCAGAATCGCGAATGCGGCCTTACTGAGCATCTTCAGTGTCCCTATTGTGACTTCAAAACCAAGTATACCAACTCGCTGCGTAATCACGTCAAAAATATCCACAATCGGGACGAAAACGCATTTTTTGACTGCGAGAAGTGCGGGAAGGTGTACAAAACGAGGGGATCCCTGTTAAACCACGTGAAACATCTATGTGGCAAAGAGCCGAGCCTAACATGCGATTATTGCGGTTATAAAGCCTTTCAAAAGTATCCGCTCCTGGCCATCCACATACAGAGAAACCACCCCGACGCCTTTCCCGAGAAGGAGTTCTTCTGCAAGCATTGCAATACAAACTATCATAATTACTACGGACTGACCCGTCATTACAAGATGGCTGCCATATGCGGTTTGAAGGAGAAGAGTTTAAATGGAAATAAGAATTAG
- Protein Sequence
- VKHEFFFKTENDNDINHKDNQASAVSTSQTYDHQNRSNINLESESFIVVKEEIDDNVVNNNADFSCSNTNISISAPIKEEDPLDIIDENVSEIDTNDITNVNLRIKTENLHEESFTKYKNETETSINQSNQTLASKSSPTSSKGEQSTSEKRYPCKYCKKTYKHKTHASRHMKHECWVARVQQGDTDRARYSCELCNANFTSNYSLTRHRFFLHSDGRRNKTSCGVCLKLFSSQKSLDHHLSSKRCGGAPANEFVCGTCNRRYRDMTSLRRHVSNECGKEPRFSCAHCDYRSLQKINLVRHLARMHGTQFDLIKVACPSCFKVYKNECTLKRHIQFECGKKPSFACKLCSYKTKRKACLTSHVKNLHSKKELKRGAVNKTIQPIEAVQIKVEDVSISDESLILDTSDVLNEEENRHNVFETNRTDIEFIDTDALYEISENLDKIIQNKFKNTKKVLKNKKKSGIQTDKVVTTKKSVKDSNKVVNRKQPMKDSTKVMSAKKSIKGSNKVVSTQKPEKDSVKEIQRPIKGSNKVVCTQTPEKDSVQETQRPIEDRNEIVDKKILSPTKMTAATKFYLHNLLVLYCQKCNVVQKKVYGMKQINCQKCDESLQYQCIKCSKRYRNYCDITMHLKYDCGKPKGFSCNICDYKTSRKCRLTDHCKSVHTLYNHKDLFNCGVCGKTFKLLKYLRWHQNRECGLTEHLQCPYCDFKTKYTNSLRNHVKNIHNRDENAFFDCEKCGKVYKTRGSLLNHVKHLCGKEPSLTCDYCGYKAFQKYPLLAIHIQRNHPDAFPEKEFFCKHCNTNYHNYYGLTRHYKMAAICGLKEKSLNGNKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00693269;
- 90% Identity
- -
- 80% Identity
- -