Eann013431.1
Basic Information
- Insect
- Eupelmus annulatus
- Gene Symbol
- -
- Assembly
- GCA_900480025.1
- Location
- UDEW01000501.1:73870-76989[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.0011 0.1 13.5 1.6 1 23 165 188 165 189 0.96 2 17 0.087 7.7 7.6 1.5 1 23 201 224 201 224 0.96 3 17 8.5 7.5e+02 1.3 4.4 1 22 230 251 230 251 0.90 4 17 0.0016 0.15 13.0 0.2 1 23 264 287 264 287 0.95 5 17 0.36 32 5.7 1.2 1 19 300 318 300 319 0.93 6 17 1.3e-06 0.00012 22.8 1.6 1 23 330 352 330 352 0.98 7 17 0.00066 0.059 14.3 0.0 1 23 358 380 358 380 0.96 8 17 0.00017 0.015 16.1 1.0 1 23 386 409 386 409 0.97 9 17 0.0023 0.2 12.6 5.2 1 23 566 589 566 589 0.98 10 17 0.0019 0.16 12.9 3.5 1 23 595 617 595 617 0.91 11 17 0.074 6.5 7.8 6.5 1 23 626 649 626 649 0.95 12 17 0.00089 0.079 13.9 3.1 1 23 655 677 655 677 0.96 13 17 6.8e-05 0.0061 17.4 1.2 1 23 682 705 682 705 0.96 14 17 0.026 2.3 9.2 1.6 1 23 711 733 711 733 0.98 15 17 0.0065 0.57 11.1 3.0 1 21 737 757 737 758 0.93 16 17 0.0047 0.42 11.6 0.3 3 23 768 788 767 788 0.98 17 17 3.1e-05 0.0027 18.5 1.2 1 23 794 817 794 817 0.97
Sequence Information
- Coding Sequence
- ATGCAACATCGCGAGGCCGACTCTGCGACGTCGTCGGGGAAATCTGGCGACGCGCCGAGCGCAGTTAAACCGGAGAGCTCCGACAGCACAGAAGCATCTTCATCACCGGATCTCGCTTCAAAGATCGATCCCAGGGAAGAACCATCATCATCGATCAATCCCGCTTCGTGTGACAAGGAAGCAACCAGCAAGTCTGCAAATCAGAGTAAGTCAGCCGTAATCAAAGAAGAACCCGGAAATCCCGAGACCCCGTCCACCCTTAGAAAGTACAACCTTCGCGATTCGACGAGCGTCGACGAGAACGGCTACAAGTCCTCCGACGAGGACAAAGAGGACCTGATCGGCAAACTGGCCGTCTATAAACAGCTGCCCGACGGCTCCTACTGCTGCGAGCTCTGCAGCAGCGGCGCCAACGACTCCAAGAAGACCGTCGTCAAGCAAAAGGCCCTGATAATCCGTCACCTTTTGCGCGCCCACACTTACTGCTTTAGCTTCGAGTGCTCGAGCTGTCCCAGCACCTTCAAGCGCGAGGCCTGGCTGAAAAACCACACCGAGACGAGCCACCACGAAGAAAGCGCGTCCGGCCAGCAGCAGGAATATTACGAGTGCGCGAGGTGCCAGCACAGGAGCACGAGCGAGAGCCTTTTGCGGCTGCACGCGCTCAGGAGGCACGCCGCTGTTTATAGGTACGTGTGCAAATGCTGCGCCAAGTGCTTCAAGAGCTGGCCGGCTAAGTACAAGCACGAGAAGACCATTGGCTGGAACGACAAGCCCAAGCCCAAGCCCAGATACGTCTGCGACAAGTGCAGCAGGATCCTCAAGACCAGGCCGGAGCTCGTCAAGCACTTGAAGGACGTTCATTCCGAGGACTTTTACAAGAATGGCGCGAGAGTTCTGCACAAGTGCAAGGAGTGCACCAAGCTTTTTTTGAGCCGCAAGTCCTTGGAAGAGCACGCGCCTGCCCATCAGGAGAACGACAGCACCGGCTACGCCTGCACCGACTGCGGCAAGCGACTCTCCAGTCGCGATCATCTGAAGAAGCACGCGCGGGTTCACAGCGGCGAGCGACCCTATGCCTGCCCGGAGTGCGGACGCGCCTTCGCCCTGCGCACCACTATGAGGATTCACGCGCTCTCGCACAGCGGCATTAAGCCTTACGTATGCCGGCACTGCGATCTGGGCTACTCGCAGAGGTCGGCTCTGATGATACACTGGAAGAGCAAGCACAAGGGCCAGCCGGCGCCGCCGCCAATTGAGATTCATCAGTACTTCGGTAGAGATGGCAGAGTTCTGGTGCCTTCGgcttacaaaacaaaaaacacttTCAGGCCGATGTACTCTATGATTAACAAgtcaaatttatgttttaggATATACTCGTCACGTTGGTGCAGAAAACAAAGTATCATCTCCAGGATACGAGTAAGAACTGCTCTGGAGCTCATCGATACTAGTTCCGACAAAGACGAGGAGCCCACGAACATAACAATGCCCAAGAAATCAGTAATACCGCCTCTAAAGATAAAACGTTCGATAAAACATTCTACGGACGTAGCAGCCGCCGAGACAAACGAGCCCGCACTCGAACCTCCACAGGAAAACGCGAAACTCGACGAATCTCAAGAAGATCTCGTAGTGATCAAGCATGCATCCTCTCAAAGTTTGCTGTATAGAAAGCTCAAAGGTGGCGCCGGCTTCGTCTGCAAAATTTGCCAGCAAAAATTCAGTCACCGCTATAAGGCCAAGCAGCACGTAAAAACGAAGCACGGACCACGCCAATCCTATACTTGTGCCGATTGTGGTAAGATTTACAAATCTAAATATCAGTTCGCCACGCACTGCAACCAGCATCGGGAAAATAGCAGCGACTATCTTTTCTGTTGCGACAAGTGCGACTACAGGGCCAAATCCAAGCACTATCTCAAAACTCATGTTATACGTAAACACACTAACGAGTACAATTTCGAGTGTGATCACTGCGGCAAGcgttttaaaatgaagatgGATCTTAAGTTTCATCTAGGTACTCATGGAGTTTCGCAGCATATGTGCGATGCTTGTGGACGGATGTATACAAGCCAGGACTCGTTGTATAAGCATCGTCGGGTCGTGCACCTGAACGACTATAAGTTTCATTGTGAAATTTGCAACCAAAAACTGCTCACTCAGGAAAATCTTGATCTTCACATGAAGTCACATAAGAATCTTCATAGCTGCGACGAGTGCGATCTCAAATTCACGAAAAGGTACTATGTCACAAGGCACAAGAAGCGAGTGCGCAAAGTAGAGAAGAAGAATCTGTGCCCTGTTTGTGGAAAGGCTTTTGTGTGCATGGCTACCCTAAGGGTTCATTATTTAACCCACGCGAAAGTCAAGCCGTACATATGCAATGTTTGCGGGTTCAGCTTTACGCAGCGTTCCTCGATGATGCTGCATTGGAAAAGAAAACATCCAGATGCTGAAGGGCCGCCTCCGCCTGTCATTCTCACAAACTTCTTCGATGCCATACAGTCCGAGGTTCACAAACTCGTCGAAACTACTACCGACGTTCCTAGCAGTCAGCCCAGCACCACGGcggtttaa
- Protein Sequence
- MQHREADSATSSGKSGDAPSAVKPESSDSTEASSSPDLASKIDPREEPSSSINPASCDKEATSKSANQSKSAVIKEEPGNPETPSTLRKYNLRDSTSVDENGYKSSDEDKEDLIGKLAVYKQLPDGSYCCELCSSGANDSKKTVVKQKALIIRHLLRAHTYCFSFECSSCPSTFKREAWLKNHTETSHHEESASGQQQEYYECARCQHRSTSESLLRLHALRRHAAVYRYVCKCCAKCFKSWPAKYKHEKTIGWNDKPKPKPRYVCDKCSRILKTRPELVKHLKDVHSEDFYKNGARVLHKCKECTKLFLSRKSLEEHAPAHQENDSTGYACTDCGKRLSSRDHLKKHARVHSGERPYACPECGRAFALRTTMRIHALSHSGIKPYVCRHCDLGYSQRSALMIHWKSKHKGQPAPPPIEIHQYFGRDGRVLVPSAYKTKNTFRPMYSMINKSNLCFRIYSSRWCRKQSIISRIRVRTALELIDTSSDKDEEPTNITMPKKSVIPPLKIKRSIKHSTDVAAAETNEPALEPPQENAKLDESQEDLVVIKHASSQSLLYRKLKGGAGFVCKICQQKFSHRYKAKQHVKTKHGPRQSYTCADCGKIYKSKYQFATHCNQHRENSSDYLFCCDKCDYRAKSKHYLKTHVIRKHTNEYNFECDHCGKRFKMKMDLKFHLGTHGVSQHMCDACGRMYTSQDSLYKHRRVVHLNDYKFHCEICNQKLLTQENLDLHMKSHKNLHSCDECDLKFTKRYYVTRHKKRVRKVEKKNLCPVCGKAFVCMATLRVHYLTHAKVKPYICNVCGFSFTQRSSMMLHWKRKHPDAEGPPPPVILTNFFDAIQSEVHKLVETTTDVPSSQPSTTAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00693243;
- 90% Identity
- iTF_00693243;
- 80% Identity
- -