Basic Information

Insect: Eupelmus annulatus
Gene Symbol: Prdm15_1
Assembly: GCA_900480025.1
Location: UDEW01015165.1:1-2585[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0012 0.11 13.5 2.9 1 23 331 353 331 353 0.98

2 12 2.1e-05 0.0019 19.0 1.9 1 23 357 379 357 379 0.97

3 12 0.00047 0.042 14.7 3.8 1 23 384 406 384 406 0.96

4 12 4.2e-05 0.0037 18.0 2.2 1 23 458 480 458 480 0.97

5 12 0.00091 0.081 13.8 1.3 1 23 485 507 485 507 0.97

6 12 2.1e-05 0.0019 19.0 2.1 1 23 555 577 555 577 0.98

7 12 0.00097 0.086 13.7 1.2 2 23 585 606 585 606 0.97

8 12 1.2e-06 0.00011 22.9 2.1 1 23 617 639 617 639 0.96

9 12 0.00028 0.025 15.4 1.6 1 23 645 667 645 667 0.97

10 12 0.0002 0.017 15.9 0.7 1 23 673 695 673 695 0.98

11 12 5.9e-06 0.00052 20.7 2.0 1 23 701 723 701 723 0.96

12 12 4.1e-05 0.0037 18.1 0.6 1 22 729 750 729 750 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0012	0.11	13.5	2.9	1	23	331	353	331	353	0.98
2	12	2.1e-05	0.0019	19.0	1.9	1	23	357	379	357	379	0.97
3	12	0.00047	0.042	14.7	3.8	1	23	384	406	384	406	0.96
4	12	4.2e-05	0.0037	18.0	2.2	1	23	458	480	458	480	0.97
5	12	0.00091	0.081	13.8	1.3	1	23	485	507	485	507	0.97
6	12	2.1e-05	0.0019	19.0	2.1	1	23	555	577	555	577	0.98
7	12	0.00097	0.086	13.7	1.2	2	23	585	606	585	606	0.97
8	12	1.2e-06	0.00011	22.9	2.1	1	23	617	639	617	639	0.96
9	12	0.00028	0.025	15.4	1.6	1	23	645	667	645	667	0.97
10	12	0.0002	0.017	15.9	0.7	1	23	673	695	673	695	0.98
11	12	5.9e-06	0.00052	20.7	2.0	1	23	701	723	701	723	0.96
12	12	4.1e-05	0.0037	18.1	0.6	1	22	729	750	729	750	0.96

Sequence Information

Coding Sequence: ataCAGTGCTgaagttgtttaatttttttctaataatttttattgtctttcAGATCATAGTTCCTAGAAGAAAAACCATCAACAATGGCGATAAACAATAGTTATTTTGTCATGCCAATGAATATGGACAGAGTATGTCGTATTTGTTTGCAagaaaatccaaatttatCACCTATTTTCTGCAATGGACAGGATGTAGGAAATCTCTCGGATTTACCACAGAAGATTCAAGTTTGTGGAGCTGTAGAGTGTCACGAGCAAGATGGTTTGCCAGCTCTGATTTGTgatgtttgtatatataaggCAAGCATTGCCCATGAATTCAGACAACTATGCCAACACTCGGATACTCGGTTACGGCTTTACTACAATAAGCCTGCTAAATATAATGCCACTGACTCTGGTACACAAACTGATCAACAAACACAAGTCCTTTTATCAAACACTGCTGAGGAAttacaaaatgattattttgtaaaacaagaAGCTATGACTAATCGACAGTTTCATGCTGCAATGTCAACTGAAGATTATAATCCAGAAAATCAGACAAATTCAGTTGTTACAACAATTGAATCAGCTATTCCATCAGTTGGTGTAAACATATCAGTTGAGgataacaaactttttaattgtcatCTTAGTTTTGAGGAACAGCAAAAAGATATTGATAAAAGTTCTGAAATTGTGCCCTGTGATACGCAAACAGTAACATGCTCGCAAGAATTAATTCCAGTTTCTGCGAATTTAATTGATGGTGTTTGTACTATAGAGACTGAACTGAGTACTGAGGagaatgaagtaaaaaatgatgttactTATTTTACCTATATAACAAAAGATGAAACAATTGTTGAAGACAACAGCTTGCAAAAGGAAGTTTTGCAGAAAAAGTCGGATACATTGCAGACTAATAGTTTTGAAAGTGAAGGCCTggaacataattattttgaatcagACAATAATACTCAAAACCCACTAGAAGCAAAATTCAAATgtgaaatatgtttaaaattgtacaGCACCCATAAAGGCCTGAAGCAGCACCAATTAATGCATGAAAATCAGCATGTCTGTGATGTTtgttcaaaaacatttaataagttggaaaacttagaaaaacacaaaaacgTTCACAGAGCTAAACCACATGCTTGCCAAACATGTCATGCCAGTTTCTCCAAATCTCAAAGCCTTATTAAGCATTTAAAGATTCACACGGAAAAAGCCAACGACATTAATAAACACACAAGTCCCGACgatcaaaaagaagaaatagatCCGAAAAAGAGCGTCAAAAGTGAGGATGACTCAGAAGATGAAGGTGTAAATGGAAACGAGCCTGATGGATTTGAGAATGCGCCGGAGATTTTCAAATGCGACGAGTGTGGTCAATATTGTTCGACGTTGAAAAATCTGAAACGCCACGCTCTTATTCACGGAGAGAGAAAATACTCCTGTACCGTTTGCAAGAAATGGTTCTTTAGACCGGACACTTTGAAGAAGCACGCGGAGAGGCATGGTCATGGCCTGCTGGATAACATCTCCGACGATAACAAGCTGTACGACTCAGATGACGATCCATTTCCCCGCTCGACTAACAACACCGAAAATGAGAGCATCAAAAAGGAGGATAGCGAAGACGAAGGTTTGAACGGTGAATATAAATGCCAGCACTGCGAAAAAGTCTTGTCGACCAAGAAGGGCTTGCGCAGGCACGTAGCTATGCACAAACCGAAGCCTGAGCCTGCCGTTTGTGAGATTTGCAAGAAGGTCTGCGCAAGCCGAGCTCGTCTCGTGCTTCATCAGAAGACTCACAATAAGCCGAAGGAGAAAGTACCGCGCGAGTACCTTTGTCATATCTGCAGCAAAGTCTACCCGAGCAACTCGTCTCTTACTTACCACATGCGTACCCACACAGGTGTCAAGCCCCACGTCTGCAAGACCTGCAATAGCGGTTTTACCACGACGACCAGCCTGGCGAACCACATTCGTATTCATACGGGCGATAAGCCCTTCGTCTGCCATGTCTGCAGTGCCGCATTTGCCGTGAGCTCCGCCTTCCGCAGGCATCTTACACGGCATACCGGTGAGGCTAACTACCTCTGCAAAACCTGTGGCAAGGCATTCAAACGACTTAGCACCCTCAAGGAGCACACCTACACGCATTCCGGCGAGAAGCCCTATGTCTGTAAGACCTGCGGCACGGCTTACAGTCACAGCGGTAGCCTCTTCGCTCACCAAAAGCGCTGCAGAGTCCAATACACCGAGATGGTCGTTGACGATCATCACCATACGGTCGCTCATCACATTCATGTCAACAACGTCCAGACTGCGGTTCGTTCGCTCGCTGTGATAGGTCAGATGTTCTGA
Protein Sequence: IQC*SCLIFF**FLLSFRS*FLEEKPSTMAINNSYFVMPMNMDRVCRICLQENPNLSPIFCNGQDVGNLSDLPQKIQVCGAVECHEQDGLPALICDVCIYKASIAHEFRQLCQHSDTRLRLYYNKPAKYNATDSGTQTDQQTQVLLSNTAEELQNDYFVKQEAMTNRQFHAAMSTEDYNPENQTNSVVTTIESAIPSVGVNISVEDNKLFNCHLSFEEQQKDIDKSSEIVPCDTQTVTCSQELIPVSANLIDGVCTIETELSTEENEVKNDVTYFTYITKDETIVEDNSLQKEVLQKKSDTLQTNSFESEGLEHNYFESDNNTQNPLEAKFKCEICLKLYSTHKGLKQHQLMHENQHVCDVCSKTFNKLENLEKHKNVHRAKPHACQTCHASFSKSQSLIKHLKIHTEKANDINKHTSPDDQKEEIDPKKSVKSEDDSEDEGVNGNEPDGFENAPEIFKCDECGQYCSTLKNLKRHALIHGERKYSCTVCKKWFFRPDTLKKHAERHGHGLLDNISDDNKLYDSDDDPFPRSTNNTENESIKKEDSEDEGLNGEYKCQHCEKVLSTKKGLRRHVAMHKPKPEPAVCEICKKVCASRARLVLHQKTHNKPKEKVPREYLCHICSKVYPSNSSLTYHMRTHTGVKPHVCKTCNSGFTTTTSLANHIRIHTGDKPFVCHVCSAAFAVSSAFRRHLTRHTGEANYLCKTCGKAFKRLSTLKEHTYTHSGEKPYVCKTCGTAYSHSGSLFAHQKRCRVQYTEMVVDDHHHTVAHHIHVNNVQTAVRSLAVIGQMF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01524177;
90% Identity: iTF_00691368;
80% Identity: -