Eann009395.1
Basic Information
- Insect
- Eupelmus annulatus
- Gene Symbol
- RAP1GAP
- Assembly
- GCA_900480025.1
- Location
- UDEW01002751.1:6775-26986[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.051 5 7.8 0.0 5 43 597 639 593 652 0.84 2 2 1.1e-08 1e-06 29.2 0.0 50 108 768 826 757 828 0.91
Sequence Information
- Coding Sequence
- ATGACAGTCGAAACGTCAAGTACATTTTTTGACACAAGTACGCAGACGGAGCCATCCCCACTTTACGATAACAACCACTACCACGAGGAGTGCCTAAAATGTAACAGCTGCGGCCTCAATCTCACGGGACCCAATCAGAAGCGGGCGCgcagGTTCAAAAACCAAATTCTTTGCGACTTGCATTTTGCCGACGTGGCGCTGATGGAGTGTTCGGACTTCATGCAGCAGTTGCGCAGCTTCAAGCCACAAAGTTTAGGCTGCGCAGTTGCCAGAAGAAAATCCTCCACCACCCTGATATTCCCCCTCCCGCCGCAGGCTTGCTCAGACGAGTTTTGTCAAGAGTATCCACACAACCTGCTGCCAACCCCGGGCTACTGGATCGAGTGCTCGAGGCAGCAGATCACAACCGACACTATCTACGATGAAAGCGAAAGCGACAGGGATGGCACCGACATCGAGCAGCAGACGGCCGAGGACCTCGAGCAGCCGCCCTCCTCGATGGGCAACAACGAGAGGATGCGGCTCGGCAACCGAGCCGACTCTTACTGCCTCTACGAGGAGAACGAGCTCGATGGCGAAGAGGCGCCGAAAAAGAAGACCGCCATCGAGGAGCAGTGGGAGACGAATCAGGGCTTCGAACTGACGTCCGTCGAGCAGGAGACGTACGAGAAGTACTTCTACGGGACCGAGCACTGGAACTACTTCACGAACGACGAAGATCTCGGACCCGTGATACTGAGCATCAAGCAGGAGACGCTCAACGGCAGGGATCAGTTTCGCATTTTGGTGAGGGCCATCAGCTACACGGTACACGGTCTCATTCCCGCCAGCTGCGTTTTTGCCGACAGATACAACCGCGAAGAAGTGGTGAGGAGCCTGGGCAAGGAGGTGAACATCAATCCTCCGCTGACGCTCGGCCAGCTGCCCGACACGCCCGAGGAGCTGCTTAAGCTCGACCAGGTCTTCATAAAGTCCGAGCTGAAGGTCGGCGTGATCTACGTGCAGGAGAACCAGTACACGGAGGAGGAGATACTCGACAACAACGACAACTCGGCGAGCTTCGACGAGTTCCTCCAGATACTCGGCGAGAAGGTCAGGCTGAAGGGCTTCGACAAGTACAAGGGCGGCCTCGACACCGTCCACGACCTCACCGGCTTCTACTCCGTCTACACCAACTGGCGGGGCATCGAGATCATGTTCCACGTGTCGACGCTCCTGCCCTACGAGAAGCACGATCCTCAGAAGCTTCAAAGGAAGAGGCACATAGGCAACGACATTGTCTGCGTGGTCTTTCTCGAGGCGGACAACACGAGCTTCAGTCCAGCCTGCATAAAGTCGCACTTTTTACACACCTTCATCCTCGTCCGGGTGAGTCCGCGAATCAAAAGGAAAATCACGCGATACGAAGTCTCCGTGGTTACCAGGGACGAAGTTGGCGCCTACAAACCCTACCTTTGGGAACAAAGTGTCTTTGAAAAAGgACCAATGTTTCGCGAATGGATCCTTACGAAGATAGTTaacggcgagcgagcgagttaCTCCGCGCCAAAGTTCGCCAGGATGCAAGAGAGGACCAGGATGCAAATGTTAGAAGATATCGTAGCGAACTTAGCGAATCATGCAGAGACTGGACAAATCCCGAAACCTTATAGgCGTGGATCATGGAGGCCAATAGGGCACATGAGACCATCCTCGCCGCTACTGGACTCTGTAAGGGATCAGTTCGAAGACTATGACCAGCTTGCCAAGGACTTTACcagagtatttttaaataatgccgAAAACCTAGCTCTTAACGCGAATCTATTTGACGTATCGTTCTTGGTGCCTggtcaacaaaaacaaaaagttcgATTTATTGGAGTACGAGCCATTCTAGGCGTCAGAAGCCGagTTTTTCAAGAAATGCTTTACGGAATTCAAGCCGGTTTTGGTAGTCCGCAAGTGCCGGTTGCCGAATTATTGGCTAGACCAGCACCGACGTTGCTTAGTCCGCAGAAACCAAAAAGTTCGAACTTCCTGCAAGTGCCGGACGTCGAAAGTCCTAGGCCTAAAAGCGTGCCGTCGTCGCCGATGGTAAAGCGGGCCTTCTCGAGGCTGGGCACGATCACCGCCGGCTGGGGCCGCAGCATACGAAAGCACGGCAGCAACACGCTCTCCAGCGAGGACCGCAAGCGCTGGACCAGCTCGCAAGACTGTAGTAATAAAGAAGCCAAAGACAAGGACAAGGCAGCCCAATCCTTGGCCGTTCCACGACTTAGCGTCTGCGCGGATGCACAAAAGGTCGATCGGGCTAAATTAGCTCAGACTGAGTTCGACATCATAGAATTCGACCCCGAGACGTTCCGCATCCTGCTGGACTACCTGCACACGGGCTCCTGCCCACTGACCTGCAGCAACATCCCGGGACTGATCTGCGCCGCCGAGCACTACGACCTTCCCGAGCTGCTCCAGGCCTGCTTCCATCACGCCAAGCAGTTCCTGCGCATCGAAATCGTCTGCGTGATGCTGTGCGCCCTGGAGAACTACTACTGGCGCTACACCTCGGCCTCCGAGCTCGTCAACATGATCCTCGCGTTCGTCGAGACGCGCGCCTTCCAGCTTTTTCAGAATCCGGACTTCCTCACGCTCAGCGAGTCGATGGTGCAGATGATCATGAACCGGGGCCTCGAGGTCGTGGAGATCAAGAAGTTCGAGGCGATGCTCAGCTGGGCGAAGCACCGCATCAAGACCAAGACCTCAGACGTCGACGCCAACATCGAGTTCAAGTGCATCATGGAGAGACTGAGCAGGGATCTCAAGCTCTATAGGATCACGCCGCAGGAGCTCATCAAGATTGTGTTACCCTCGAAATCGATAAGGCACGAGAGAATCCTTGAGACTCTGATGTTCCAGGCGAACTCTGGTATATACAGGAACGTGGATCATTACCTCGAGGCCTATCAGAATCGGGTGCAGAATCAGGAAAGCTTCGACGGCGGATTGTAG
- Protein Sequence
- MTVETSSTFFDTSTQTEPSPLYDNNHYHEECLKCNSCGLNLTGPNQKRARRFKNQILCDLHFADVALMECSDFMQQLRSFKPQSLGCAVARRKSSTTLIFPLPPQACSDEFCQEYPHNLLPTPGYWIECSRQQITTDTIYDESESDRDGTDIEQQTAEDLEQPPSSMGNNERMRLGNRADSYCLYEENELDGEEAPKKKTAIEEQWETNQGFELTSVEQETYEKYFYGTEHWNYFTNDEDLGPVILSIKQETLNGRDQFRILVRAISYTVHGLIPASCVFADRYNREEVVRSLGKEVNINPPLTLGQLPDTPEELLKLDQVFIKSELKVGVIYVQENQYTEEEILDNNDNSASFDEFLQILGEKVRLKGFDKYKGGLDTVHDLTGFYSVYTNWRGIEIMFHVSTLLPYEKHDPQKLQRKRHIGNDIVCVVFLEADNTSFSPACIKSHFLHTFILVRVSPRIKRKITRYEVSVVTRDEVGAYKPYLWEQSVFEKGPMFREWILTKIVNGERASYSAPKFARMQERTRMQMLEDIVANLANHAETGQIPKPYRRGSWRPIGHMRPSSPLLDSVRDQFEDYDQLAKDFTRVFLNNAENLALNANLFDVSFLVPGQQKQKVRFIGVRAILGVRSRVFQEMLYGIQAGFGSPQVPVAELLARPAPTLLSPQKPKSSNFLQVPDVESPRPKSVPSSPMVKRAFSRLGTITAGWGRSIRKHGSNTLSSEDRKRWTSSQDCSNKEAKDKDKAAQSLAVPRLSVCADAQKVDRAKLAQTEFDIIEFDPETFRILLDYLHTGSCPLTCSNIPGLICAAEHYDLPELLQACFHHAKQFLRIEIVCVMLCALENYYWRYTSASELVNMILAFVETRAFQLFQNPDFLTLSESMVQMIMNRGLEVVEIKKFEAMLSWAKHRIKTKTSDVDANIEFKCIMERLSRDLKLYRITPQELIKIVLPSKSIRHERILETLMFQANSGIYRNVDHYLEAYQNRVQNQESFDGGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00882340; iTF_00962632; iTF_00969803; iTF_01255824; iTF_00729474; iTF_01245355; iTF_00280079; iTF_01482641; iTF_01484052; iTF_01067065; iTF_01069099; iTF_01489563; iTF_00961950;
- 90% Identity
- iTF_00882340;
- 80% Identity
- iTF_00691328;