Esab036305.1
Basic Information
- Insect
- Eumerus sabulonum
- Gene Symbol
- ZFX
- Assembly
- GCA_951905685.1
- Location
- OX645064.1:95692443-95695501[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.003 0.53 12.0 0.2 2 23 108 130 107 130 0.96 2 20 0.00056 0.098 14.3 0.8 1 23 136 158 136 158 0.96 3 20 0.00013 0.023 16.3 1.1 2 23 167 188 166 188 0.98 4 20 0.00075 0.13 13.8 1.2 1 23 194 217 194 217 0.96 5 20 0.0023 0.4 12.3 2.9 1 23 249 271 249 271 0.95 6 20 7.2e-05 0.013 17.1 2.2 1 23 277 299 277 299 0.98 7 20 8e-07 0.00014 23.2 2.3 1 23 305 328 305 328 0.98 8 20 0.0064 1.1 10.9 1.0 1 23 338 361 338 361 0.95 9 20 5e-08 8.8e-06 27.0 0.8 3 23 453 473 451 473 0.97 10 20 1.2e-05 0.0022 19.5 0.1 1 23 479 501 479 501 0.97 11 20 0.0013 0.23 13.1 0.5 1 23 512 536 512 536 0.94 12 20 0.0012 0.2 13.3 1.6 1 20 542 561 542 563 0.94 13 20 0.5 88 5.0 6.0 1 23 601 623 601 623 0.97 14 20 2.9e-06 0.00052 21.4 2.1 1 23 629 651 629 651 0.98 15 20 0.00081 0.14 13.8 0.9 1 23 657 679 657 679 0.98 16 20 0.001 0.18 13.4 4.0 1 23 685 707 685 707 0.97 17 20 8.7e-07 0.00015 23.1 0.9 3 23 810 830 809 830 0.99 18 20 0.0012 0.22 13.2 1.4 1 23 836 858 836 858 0.99 19 20 7.5e-06 0.0013 20.2 0.4 1 23 865 887 865 887 0.99 20 20 7.6e-05 0.013 17.0 5.7 1 23 893 915 893 916 0.96
Sequence Information
- Coding Sequence
- ATGCAAAACAATTCGGATCTATTCAACCCCATCCCCGGTGATATGACTACATCCGATGCGCGCCTCTACCACCTGAACGATGACGAAGAAAAGTTATCCAAATCGAACGATTTCTACCCATTCGGAATCGATGGCTTCACCATGTCAGGAATCGATGATATCTCAAGTATGGTGATCCTCAGTCCGATACCAGAGGAAACAAGTTGTTCGTTAAATGTATCACCTCTGGAGCCGCTTTTTTCACCGGTCGATTCCGTCCCGTCCGGGCACAAATTCACCAATTCGGAAATCGACAGTAAACCCACCGCGGTCAGGCAAGTCTCGTGCGATTTGTGTTCGGAGACATTCCCGTCGAACCAAGTGTTGCAACTGCACCGGAGGGTACAGCATATCCGAGCGAAAGAGTTTCGTTGTCGCAAGTGTTCCGCTTCGTTCAATTTTGAGTCGAATCTTCGACTGCATTTGGCGGCACATGTGCCCAGTTTGAGCGTCAAGAAACAGTGCCCGGAATGTAAAATGGAATTCAAGCGATTGTCGGCATTCAAGGGGCATCTGAAGTCGCATCAGTCGAGTGATCGTTTTAAGTGCAATCGCTGCGACAAGGAGTTCGAGCTCAAGGGCTACTACGAGAAACATACGGCAAAGGCGCATAAACCAGGCGCCGACGGTACTATCGAAGAGATTCTCGCCAAAGtcGCAACAAACGCTAGATATCGAGTGAAGGACAAGAAATCGCAAGGGAAATACACCTGCCAAGCGTGTGGGAAGCGATTTTTCAAACCGTGCCTGTTGAAACGCCACGAAGTGTCCCATACGGGGGCGAAACCATTCCAATGTGCAGAGTGCAAGCACGGATTCACACAGAAAACCTCGCTGGACAGGCATATGCTGCTGCATCAGGGCGTTAAAGATTACAAATGTCCCAAATGCGACTGTAGTTTCGCCCAGAAAAACAATCTCATCGTCCACATCAAACGGACGCATCCTCTCCATCCGGACTTGGACCAGATGTATGCGTGTGAGTACTGTCCGTGCATATTCACCAAACTGAACAGCGTCAATCGGCACAAGGCAATGGTGCACGCGAATAGGGACAATGCCACTGATAACCCATTTGTCGACGATGACGATGGCAACGTGAATGCTGCCAAGGTCATGGAGCAACTAAAGAGTTTCCAGGAATCGATGAGCATCATGGACATGCAACCGTCAGCACTCGAACTCTCCCTATTAAAGCCACCATCGCCTGGGCCTCAGGTTCGCACGGTCGAGATCGTGGACACGCTAAACCCGAAGAGAGAAAAGACCTACAAAACTGTTAAGGAGATCGTATATCGGGGGGAGAGGACGTTAGCGTGTCCGTACTGTGATAAATCGTTCAAGAAGCAATTCGATCTGTTAAGGCACATCCGTACTCATACCAAGGAAAGGCTATTCGAGTGCGAGGTTTGCCAGAAAAACTTCTCCACGCAAGCTGCTCTCAGGGTACATGAATCTATCCACTTGTCCAGCCAAGAAAAGCCCGCAAAATTGTTCGTCTGCGTTGAGGATCAGTGTGGCAAGCGATTCTCGTCCATTCGGAAGCTGGACATTCACACGAAGACACACAGCAACTCAATTTCATATATCTGCCCTCTGTGCTCGAAGACGTTTACCTCCAAGGCAGGTTTTTCGGCCCACAAACACCATCAAAAGGACAAGGAATTTGACATGCTTCGTCCGCTTCTCATGCCGCCGGTCAAACTCAACACAGACGACATCGAAGAAGCCGAGAAAATTGAGGAGTATGCCAAGAGAAAACATCAATGCTGCATATGCGGCCAGAAAATGCAAAAACTCTCGCACCTGCGGCAACACGAAGCCACCCATACGGGTGAGAAACCATTCAAATGCTCCATCTGCTTCAGATCATATACGACTCAGAGTTCCCTCAATCAGCACGTCAAGATCCACACCGCAGACAAGCAGTTCACGTGCACCGTATGCAACGCCAAATTCCTTACGCAGTCTCTGGTCAAGCGGCACATGATCTCGCACAGTGATGAGCGCAAATTCGCCTGTCCCTACTGCAGCGAGCACTTTAAAACCAACGACAATTGCAAGGACCACATCCTAACGCACGCTCGTAACCTTCTCTCCGCCACCGAACTGCACTTCGGAGACGAGCAAGACTGCCAAGAGCAACATTTTCAGGAACCTCTTCAGCTCGCTGCTCCCGAAGACTATACACAATCCTGCATAGCCGTCGTACAAGAGCAACAACCGCACAACACACCGAAATTCATCGAACTGGAGCTGATAAAAAACTGCAAGAAGCACAATCACAAGAATCTAACCATCGAAACGTTGCCCAGTGTGGCGAAGAAAAAATCCGCCAAACAGTCCATCGCACGATCGTTGAAACAAATCAATcaaaccggacatggctgcagTGAGTGTGGCAAAACCTTCTACAAAGCCAGTGACTTGCAGCGACATTCGAGAACCCACACGAAAGAGAAACCTTTCCGGTGTGAATTGTGCTCGAAACAGTTTGCCCTGATGTCTACTTTGGTGCAACACAAGAAGACACACGACACGAAACGTGAGACCTATACTTGTCAGGTATGCGGTAAGAAGTACACGTCGCAAAAGGTTCTGGTCGTGCACTTGAGAATCCATACGGGCGAACGACCGTTTCAGTGTAATGTGTGCAAAAAGACGTTTAGAACGTCCGGCCATAAGATATCCCACATGAAAGCGCATCATAAAAAGAAAAGGCAATGA
- Protein Sequence
- MQNNSDLFNPIPGDMTTSDARLYHLNDDEEKLSKSNDFYPFGIDGFTMSGIDDISSMVILSPIPEETSCSLNVSPLEPLFSPVDSVPSGHKFTNSEIDSKPTAVRQVSCDLCSETFPSNQVLQLHRRVQHIRAKEFRCRKCSASFNFESNLRLHLAAHVPSLSVKKQCPECKMEFKRLSAFKGHLKSHQSSDRFKCNRCDKEFELKGYYEKHTAKAHKPGADGTIEEILAKVATNARYRVKDKKSQGKYTCQACGKRFFKPCLLKRHEVSHTGAKPFQCAECKHGFTQKTSLDRHMLLHQGVKDYKCPKCDCSFAQKNNLIVHIKRTHPLHPDLDQMYACEYCPCIFTKLNSVNRHKAMVHANRDNATDNPFVDDDDGNVNAAKVMEQLKSFQESMSIMDMQPSALELSLLKPPSPGPQVRTVEIVDTLNPKREKTYKTVKEIVYRGERTLACPYCDKSFKKQFDLLRHIRTHTKERLFECEVCQKNFSTQAALRVHESIHLSSQEKPAKLFVCVEDQCGKRFSSIRKLDIHTKTHSNSISYICPLCSKTFTSKAGFSAHKHHQKDKEFDMLRPLLMPPVKLNTDDIEEAEKIEEYAKRKHQCCICGQKMQKLSHLRQHEATHTGEKPFKCSICFRSYTTQSSLNQHVKIHTADKQFTCTVCNAKFLTQSLVKRHMISHSDERKFACPYCSEHFKTNDNCKDHILTHARNLLSATELHFGDEQDCQEQHFQEPLQLAAPEDYTQSCIAVVQEQQPHNTPKFIELELIKNCKKHNHKNLTIETLPSVAKKKSAKQSIARSLKQINQTGHGCSECGKTFYKASDLQRHSRTHTKEKPFRCELCSKQFALMSTLVQHKKTHDTKRETYTCQVCGKKYTSQKVLVVHLRIHTGERPFQCNVCKKTFRTSGHKISHMKAHHKKKRQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00991991;
- 90% Identity
- -
- 80% Identity
- -