Esab031701.1
Basic Information
- Insect
- Eumerus sabulonum
- Gene Symbol
- -
- Assembly
- GCA_951905685.1
- Location
- OX645063.1:98044470-98049384[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 4e-05 0.0071 17.9 2.1 1 23 448 470 448 470 0.96 2 18 1e-05 0.0018 19.7 0.4 1 23 476 498 476 498 0.97 3 18 0.00051 0.09 14.4 0.5 1 23 504 526 504 526 0.96 4 18 1.7e-05 0.003 19.0 3.1 1 23 532 554 532 554 0.97 5 18 3.9e-05 0.0069 17.9 4.7 1 23 560 582 560 582 0.99 6 18 7.1e-05 0.013 17.1 5.7 1 23 588 610 588 610 0.97 7 18 2e-07 3.5e-05 25.1 4.3 1 23 616 638 616 638 0.98 8 18 1.2e-07 2.2e-05 25.8 2.4 1 23 644 666 644 666 0.97 9 18 0.00017 0.029 15.9 5.7 1 23 672 694 672 694 0.97 10 18 2.1e-05 0.0037 18.8 6.5 1 23 700 722 700 722 0.98 11 18 3.5e-06 0.00062 21.2 4.5 1 23 728 750 728 750 0.98 12 18 8.2e-06 0.0014 20.0 8.1 1 23 756 778 756 778 0.98 13 18 2.1e-06 0.00037 21.9 7.7 1 23 784 806 784 806 0.98 14 18 7.4e-07 0.00013 23.3 7.7 1 23 812 834 812 834 0.98 15 18 0.00023 0.041 15.5 9.5 1 23 840 863 840 863 0.95 16 18 0.0002 0.035 15.7 0.5 1 23 869 891 869 891 0.97 17 18 0.00088 0.16 13.6 4.4 1 23 901 923 901 923 0.98 18 18 7.3e-06 0.0013 20.2 1.7 1 23 929 952 929 952 0.96
Sequence Information
- Coding Sequence
- atgttacaGCAACATgtccagcagcaacagcaacaacaccatGAAAATCCTGGTATTAGCGGAATTATTCAGCCTGTTGGCGGGATCGATTCGGATGTGTcgaaacaacaacatcaacaccACCAGCCATCGCTAGTATCGGGTACCCAACATCTTGGAAAGTACTGGGTTGTTACAAATCTCTTTCCGGGTCCAGGTCAACCGCCATACAATATTGGTGTAACACCAACAACCTCAGCAGTTCCTACACTACCGCCTCCGATATCATCTCATTCAAGCGCCTCATCAAATAAATCAGGAAActcgaaacaacaacaacagcaacaggatCAACTAGCACCTAATTCGCATACACAATCACCAGCTCATAGTATAGTCCCATCGGTTGGTGCAACATCTCTACAAATACCCAATCCTATGATAACGAATGCCTCATTGAATCAACAACAGCTTCCGAATGGTACTATTATAGCAGCACCACGTCATCCCGACTCCATTCACGTTCATGGAACGATGTCCGCCGATGATAATCGACACGTCTCACACGGTATGCAAGATATTAAGGAGGAGAAACCGTTCGCCAATGGCGGCAAACAAAATCACATGACCCATGTGGTGAATGCAACATCATCGGTTACGTCGAAAATGAATTCTGGCAATGGTGCTGTTGGTGGTAATGGTGGTGGtggcaataataataataatgcgcAATCTGCCGAACCAGGTGGCGGCGGTGGTGGCAacggcggcggcggcggcggaGGTGTCGCCAATCAAATGGTTAACAAACAATCTAATAACAATAACACTACCAGTGGTGGTGGTAATGGTCCCGGTGGTACAACGACAACCGGTAATGGTAATGAACAACAAGAAATGGTTGGCGGTAAGCCACCGCCACACGGTGTCGAAATGTATAAAGTTAATATTGAAGATTTAAGTCAATTTCTATCATATCACGAGGTCTTTGGCAAAATTCACGGTGAAGTTATCAATCAACAACAAATATCATCGCATACGGTTACGCATCCTACAACCAATGTATCAACCTCAAATGCCGGTGGCAATACCGCTATTAGTGGTACTGTTACCGGTACACTACCTCCACCCCCGCCACCGTCGACAAATGGCaattcgatagtgacaaacaataataataacaacaacaacagccttaccagttcagGGACAAGTGGTCAAACAAATGCACCACAAGGCAGTGGTGGAACATCTTCTGTACCTGGCAATTTATTACTGCCCAAAATGGAGAATCAAGGTATGAGTGTTGATCAGAATACACCACTGTTAGCGCCGGACGGTACACCGATTATGGGCGGTACGCATATCTGTGACATTTGTGGCAAAATGTTTCAATTTCGTTATCAATTAATCGTACATCGTCGCTATCATAGCGAACGTAAGCCATTCAATTGCCAAGTATGCGGGCAGGGATTCACAACATCACAAGATCTCACCCGGCACGGTAAGATTCATATTGGCGGGCCAATGTTCACATGTATCATTTGCTTCAATGTATTTGCCAACAATGCCAGCCTGGAACGGCATATGAAGCGCCATTCAACTGATAAGCCATTCGCATGCACCATATGCCAGAAGACATTTGCCCGCAAAGAGCATTTGGATAACCATTTTCGCAGTCATACGGGCGAGACGCCATTCCGTTGTCAGTATTGTGCGAAAACGTTTACGCGTAAAGAACACATGGTTAATCATGTGCGCAAGCATACCGGAGAGACGCCGCATCGTTGCGATATTTGTAAGAAATCATTTACGCGGAAAGAGCACTATGTAAACCATTACATGTGGCATACAGGACAAACGCCACATCAGTGCGATATTTGTGGGAAGAAATACACTAGAAAGGAACATTTAGCCAATCATATGCGATCACATACAAATGACACACCATTCCGGTGTGAGATATGCGGCAAAAGCTTTAGCCGAAAGGAGCACTTTACTAATCACATCTTATGGCATACAGGAGAAACCCCTCATCGCTGTGATTTCTGTGCGAAGACGTTTACCAGGAAGGAGCACCTTTTAAATCATGTCCGCCAACATACGGGTGAGTCACCACATCGCTGCACCTATTGCTTGAAGACCTTCACTCGTAAGGAACACCTAGTGAATCACATTCGTCAACACACAGGCGAGACCCCCTTCAAGTGTACATACTGTACCAAGGCGTTCACCCGCAAGGATCATATGGTTAATCATATACGTCAACATACCGGAGAATCGCCACATAAATGCACCTATTGCACGAAAACATTCACACGGAAAGAGCATCTCACCAATCATGTGCGCCAGCATACGGGTGAGTCGCCACATCGTTGTAGCTATTGCAAAAAAACCTTTACACGCAAGGAACACCTAACAAATCACATCCGGTTGCATACAGGCGATTCGCCACACAAATGCGAATACTGCCAAAAGACATTCACACGCAAGGAGCATCTCAACAATCATATGCGACAGCATTCAAGTGACAATCCACATTGTTGTAATGTATGCAACAAACCATTTACGCGTAAGGAGCATTTGATCAATCATATGTCACGCTGTCATACTGGCGATCGACCGTTTGCATGTGAAACATGTGGCAAAAGTTTCCCTCTCAAAGGTAATCTACTCTTCCATCAGCGCAGCCATACCAAGGGACAGGAATGTGAGCGTCCGTTTTCGTGCGAAAAATGCCCAAAGAATTTCATATGCAAAGGTCATTTGGTGTCCCATATGCGATCGCATTCAGGTGAGAAACCGCACGCTTGTACAATGTGTAGTAAAGCATTTGTCGAGCGAGGGAATCTCAAGCGTCACATGAAAATGAATCATCCGGATGCGGTTATGCCGCCACCGCCAACACCCATTCCGGGAATCCTGACGCAGATCAAACAGGAGATCAATCCAATAATAATTCCTCATCAGCCACCAACTATGCATACGATACAGCAAATCACTTCAACTGCAGGCAGCTCAAGTGCAAATAATCCTGGCAATCCTGGTCTACTTGCGCCCGGTCTTGTTCCCATGGTATCGTCTACAATTACATCGCACATAAATCAAAAGCAACAGTCGcaccaacagcagcagcaacaacaacaacagcagcagcagcaacagcaacaacagcagcaccaACAGCATCAGCAGCaattacaacaacaacagcagctttTGCAATTATCCATTCAGCAGGTAGCACATCAGCAAGCTGAGCAtcgacaacaacagcaacaacaacagcagcaccaacagcaacaacaacaaggcCATCAACAACACCAACAAGCTCAACAACAATCACAACAGCAATCACATCAACAACCACAACCGCCACCAGTGCCGATAGCTCTTATTGGAGCCGATCCATCGACAATAGCACGCGCTGCAATGCAACAATTACAGCATTTGCCAACCAATGTCGAACAACATCCAGTGGTGTACTAA
- Protein Sequence
- MLQQHVQQQQQQHHENPGISGIIQPVGGIDSDVSKQQHQHHQPSLVSGTQHLGKYWVVTNLFPGPGQPPYNIGVTPTTSAVPTLPPPISSHSSASSNKSGNSKQQQQQQDQLAPNSHTQSPAHSIVPSVGATSLQIPNPMITNASLNQQQLPNGTIIAAPRHPDSIHVHGTMSADDNRHVSHGMQDIKEEKPFANGGKQNHMTHVVNATSSVTSKMNSGNGAVGGNGGGGNNNNNAQSAEPGGGGGGNGGGGGGGVANQMVNKQSNNNNTTSGGGNGPGGTTTTGNGNEQQEMVGGKPPPHGVEMYKVNIEDLSQFLSYHEVFGKIHGEVINQQQISSHTVTHPTTNVSTSNAGGNTAISGTVTGTLPPPPPPSTNGNSIVTNNNNNNNNSLTSSGTSGQTNAPQGSGGTSSVPGNLLLPKMENQGMSVDQNTPLLAPDGTPIMGGTHICDICGKMFQFRYQLIVHRRYHSERKPFNCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIICFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGESPHRCSYCKKTFTRKEHLTNHIRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQECERPFSCEKCPKNFICKGHLVSHMRSHSGEKPHACTMCSKAFVERGNLKRHMKMNHPDAVMPPPPTPIPGILTQIKQEINPIIIPHQPPTMHTIQQITSTAGSSSANNPGNPGLLAPGLVPMVSSTITSHINQKQQSHQQQQQQQQQQQQQQQQQQHQQHQQQLQQQQQLLQLSIQQVAHQQAEHRQQQQQQQQHQQQQQQGHQQHQQAQQQSQQQSHQQPQPPPVPIALIGADPSTIARAAMQQLQHLPTNVEQHPVVY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00426545;
- 90% Identity
- -
- 80% Identity
- -