Esab034364.1
Basic Information
- Insect
- Eumerus sabulonum
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_951905685.1
- Location
- OX645064.1:55444754-55445421[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2e-16 4e-12 47.2 0.8 130 186 1 57 1 64 0.96 2 3 2.5e-21 5e-17 63.3 2.7 230 299 65 130 62 131 0.86 3 3 0.046 9.4e+02 0.0 3.1 150 171 159 180 132 195 0.45
Sequence Information
- Coding Sequence
- ATGGAAGAGTCATACGCGCAATTGCAGCGTATATTTAAAGAGAAAACACGCGAGTGTAACGCTCCCAAACGGAATCTGGACAAATTGAGCGAAGAACTGAAACTTGTCCAGGGGCAATTGAATGAACGCTATACGCTTATAACCGAACAACGTTTAGTTATTGTAGCCGTGGCTGGGATGCCAAGCGAGCTtgaagaaaaacaacaacttCAGGCTGAAGTGCGACATTTACAGGAGCAATTAGAGAATGTCAAGACACAGGGACGAGGACGAGGTAACTCCATGAATGGTTCAATGGGACCCGATGACGATTACGAAGTTAAAAGAGAAGCGAACAAAATCATCTCAGACTACAAATATAAACTGCAAAAAGCCGAACAAGAGATTGCTAGTCTACAGGCCAGTTTAGCTCAATCAGAAACTCAAGTAATACGTTACAAGAGTACAGCGGAAGCAGCCGAAAAAGCTGAGGCAGATCTGAAATACGAAAGGAGGAAGCTTCAACGAGAGAACCGTGATGTAATGGAACGCCTAGAAGAGTTAGAAACATCCAATCATCTACTAAAACGACTGGATAAATTAAAGAATGCTTAG
- Protein Sequence
- MEESYAQLQRIFKEKTRECNAPKRNLDKLSEELKLVQGQLNERYTLITEQRLVIVAVAGMPSELEEKQQLQAEVRHLQEQLENVKTQGRGRGNSMNGSMGPDDDYEVKREANKIISDYKYKLQKAEQEIASLQASLAQSETQVIRYKSTAEAAEKAEADLKYERRKLQRENRDVMERLEELETSNHLLKRLDKLKNA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -