Esab020849.1
Basic Information
- Insect
- Eumerus sabulonum
- Gene Symbol
- -
- Assembly
- GCA_951905685.1
- Location
- OX645061.1:89774989-89776822[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-10 1.1e-07 32.5 0.1 3 43 16 56 15 58 0.92
Sequence Information
- Coding Sequence
- ATGCGTACATACAAGCGAAAAACTGAGAGAGCTGCTGCTTGTCAAGAACAGCTAAATACAGCTGCGAGATCTGTCTTGGCTAAAGAAAAATCGATAAGAGCAGCAGCGTCTGAATTTGGAATACCAAGAACAACATTAAAAAGGTACATTAAAGAAACAGAGTCCCAAGAAAATCCTCGCATGGGTTACGGTGCGCCAAGGCAAGTCTTCGATGCGCAACAGGAAATATTATTAAAGGAGTATTTGCTAAAAGCATCCTCTATATTTTATGGCTTAACGCCAAAGAATGTTCGCACGCTTGCCTACAAATGTGCAATCAATATCGAAATACGATTTCCTGATACCTGGAGTGAAAACAGGAAACCGGAAGCTACGAGTCTGGGCCGGGCCACCTCCTTCAACAGAACTAACGTGTATAGCTTTTTTAACAAACTGTCTGAGGCTATGGATAGAAACAAGTTCAGTGCTTCAAATATATGGAACGTTGATGAGACTGGTGTATCCACCGTATGCAAACCAGGCAAAATAGTTGCggcaaaaggcaaaaggaatgtaGGGTCGCTGACTTCAGGCGAACGTGGTACAAACGTGACTTTAATAGTAGCCGTCTCAGCTTCTGGGGTTGCAATCCCAGCTATGTTTATTTTTCCTCGGAAAAATTATAAAGACCACTTCATTAACGGAGGTCCTCCAGACTGCATTGGAACTGCAAATGCCAGCGGTTGGGCCACAAATGACGAATTTTTCGCTTTCATGGTTCACTTCATACGGCATGTGAAACCAACTCAAGAATGCCCCGTATTACTGGTCCTCGACAATCATTCCTCTCACCTCTCAATTGAAACGCTGGAAATAGCCAAAGCCAACGGCATTGTCATGCTCTCGTTTCCACCTCATTGTAGCTATAGGCTTCAGCCCCTAGACGTTTCCGTATTTGGACACTTTAAAAAATATCTATCCGGGGCCCAAGACGGATGGCTACGTAGCAATCCAGGCCGGACAATTACAATTTACGACATTCCCCGAATTGTAGCTGAGTCTCTTCCCTTGGCTACAACTCCAATAAATATTATCAATGAGTTTAAAAAGGCTGGGATATTTCCATACAACAGGGAGATTTTTACTCCCAGTGAATTCGACCCATCATACGTGACAGATCGTCCAGAAGCAGTAGATTCAGCTGTTCCAATTGAACTTCAGGATTCTATTCCCCAGCAAATTGGAGCTGATATTGTTGTTGAGAACCCTACTGAGAACACAGCAAATAACCCTTTGCCATCTACATCTCGAGGATTTCATCAATTTTCGCCAGAAATAGTTTTGCCGTTTCCAAAAGCTGTGCCAAGGAAGCAAACACTTACCAAAAGAAGGAAGAGACGAGCTGCAATCTTAACTGACACCCCGGAAAAGGAGGCCTTGCAAGAGGAACAAAAGCAAAGGAAAACGGCCAAAGCAAAAGttgacaaaaagaaaaaaacacagaTTAAGAGAAAGGTGTTGCAAAAATCAAGTTCCGAGGAGGAAGAAGATCCGGAATGTTATTGTCTAATGTGCATGGAAGCATTCTCTGAAAGTTTGCCGGGCGAGGAGTGGGTACAGTGCCATACTTGCCGAAATTGGGCTCATACGAAGTGCTCACCTGGACTTGGGGTCGTTTTTATTTGCATTAACTGCAACAGCGACTACGATTCCTAA
- Protein Sequence
- MRTYKRKTERAAACQEQLNTAARSVLAKEKSIRAAASEFGIPRTTLKRYIKETESQENPRMGYGAPRQVFDAQQEILLKEYLLKASSIFYGLTPKNVRTLAYKCAINIEIRFPDTWSENRKPEATSLGRATSFNRTNVYSFFNKLSEAMDRNKFSASNIWNVDETGVSTVCKPGKIVAAKGKRNVGSLTSGERGTNVTLIVAVSASGVAIPAMFIFPRKNYKDHFINGGPPDCIGTANASGWATNDEFFAFMVHFIRHVKPTQECPVLLVLDNHSSHLSIETLEIAKANGIVMLSFPPHCSYRLQPLDVSVFGHFKKYLSGAQDGWLRSNPGRTITIYDIPRIVAESLPLATTPINIINEFKKAGIFPYNREIFTPSEFDPSYVTDRPEAVDSAVPIELQDSIPQQIGADIVVENPTENTANNPLPSTSRGFHQFSPEIVLPFPKAVPRKQTLTKRRKRRAAILTDTPEKEALQEEQKQRKTAKAKVDKKKKTQIKRKVLQKSSSEEEEDPECYCLMCMEAFSESLPGEEWVQCHTCRNWAHTKCSPGLGVVFICINCNSDYDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01520954;
- 90% Identity
- iTF_00688571; iTF_00688566;
- 80% Identity
- -