Esab002764.1
Basic Information
- Insect
- Eumerus sabulonum
- Gene Symbol
- -
- Assembly
- GCA_951905685.1
- Location
- OX645060.1:43563258-43565117[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.4e-11 2e-08 35.0 0.0 2 38 13 49 12 54 0.89
Sequence Information
- Coding Sequence
- ATGCCGAAAAAAGGAGTACATGTGAGAAACTGGGACCCAGCCTCAATGGAAAAGGCCCTTTTTGCCATCAAGAAAGGCGAAATGGGAGTGAAGCTGGCTGCCAAAACATATAATGTTCCCAAAACAACATTACAACGTATGGCACGATCTGGTAAACCTATTAGCGATGTATTGTCCACCCCCTTGGGTCGAAAGCCAATTTTTAGTAAAGCAATGGAAGACGAACTTGTAAAATATTTACAAGAAATGGAAAACAGGTTCTGGGGTTTAACAAGAAAAGATATTCGAAGTCTGGCATTTCAAATGGctgaaaaaaataatattccCAACAAATTTTCACTATTACATAAAAGTGCAGGAAAAGATTGGCTTTACAGTTTTTTGAAAAGACACAGGCATGAATTAAGCTTTCGGATGCCAACAGGTACCTCAGTCGATAGAGCGAAAGGCTTTAATCAAGAAAGTGTAAACAAGTTTTTCGATATTTTGGAAGGGGTGTATGAGAAATATAAGTTTGCAGCATCCAGGATATGGAATGTGGACGAAACTGGTCTCACCATAGTGCAAAACAAGCAACCACAGGTTttagcaaaaaaaggaaaacgtcaAATAGGAGCCTTGACTTCGGCGGAACGTGGTTCTCTGGTTACTGTAGTGAATTGCATGAGTGCAGGTGGAAATTTTATTCCACCATATTTCATATTTCCAAGAAAAAGATACAACCCACTTTATATGAACAACGCTCCTGCTGACTCCAAGGCCGAATTTCATAGTTCTGGGTGGATTCAAGTACACATTTTCACAAATTGGTTCCGTCATTTCTTGGAGTTCTCTAAACCTTCAGAAGAGCAGCCGGTTCTTTTAATTTTAGATGGTCATTATAGccatactagaaatttggaagtTATTGACCTGGCACGCCAACATTTTGTTACCATTATTTCCCTGCCCCCTCATTGCACCCACAAGATGCAGCCCTTGGATAGGACATTTATGGGGCCTCTTAAGAAGTATTATAATGAGGAAATCAGGGGCTTCATGAGAGAATCTGGGCGAAAAGTGACATTGGGTGATATAGCTCAATTATATAAGAATGCTTTTCTTAAAGTGCAAACAGGACGAGTTGCAGTTAGCGGGTTCAAATGTAGTGGAGTTTTCCCTTTCAATAGAAATATTTTTTCTGAGGCAGATTTTATGGCATGTGAGCCTGAGCCTGAGCCATTAGAAACTAAAGTTGAAAGTCGAAATATGAATGACAGTTTGATTCAACCACCGAGCTTAAATATAAATTTGGATAATGAAATAAATGTAAGTGAAATGCGGAATATTGTCGCAGAAGTAAGCAGCCAAAACACATTCACTTTGATTTTGAACCAAACGGAAGCCCATTTTACTCCTTGGGAAGTTTCACCACCTCCAAAATTGAAAAGGGTAGCCACCACAAATAGGGGAAGAAAAACTGAAGCCGCAATTTTGACTGTATCGCCTTATAAAATGCAGTTACAGGAAAGCATTAATAAAATTCAAAAGCCTGGTAAGACCAAAACTAGAAAGAACCCAATAGGAAATGAAAAGCCAATAAGTAAGGCTTCCACTTCGAGACGCCGTCAGTCTTTATCATTAGATGATGGCCTTGCTCCTTACAAAATATTATTTGCTGATTCTGAAGATGAAAATAATGAATTCCCGTCTTCGAATGGTACCAAATGCAACTTCTGCGATTTGTCTTGGGGTGATGACTTGACTGGGGACAAATGGATTCAGTGTCTTCAATGCGAAATTGTTTGGGCTCATGAAAAATGCATGCCGAAAAGGAGTGTTATTTTTATTTGCAGTTCGTGTGGCCAAAATACAATATAA
- Protein Sequence
- MPKKGVHVRNWDPASMEKALFAIKKGEMGVKLAAKTYNVPKTTLQRMARSGKPISDVLSTPLGRKPIFSKAMEDELVKYLQEMENRFWGLTRKDIRSLAFQMAEKNNIPNKFSLLHKSAGKDWLYSFLKRHRHELSFRMPTGTSVDRAKGFNQESVNKFFDILEGVYEKYKFAASRIWNVDETGLTIVQNKQPQVLAKKGKRQIGALTSAERGSLVTVVNCMSAGGNFIPPYFIFPRKRYNPLYMNNAPADSKAEFHSSGWIQVHIFTNWFRHFLEFSKPSEEQPVLLILDGHYSHTRNLEVIDLARQHFVTIISLPPHCTHKMQPLDRTFMGPLKKYYNEEIRGFMRESGRKVTLGDIAQLYKNAFLKVQTGRVAVSGFKCSGVFPFNRNIFSEADFMACEPEPEPLETKVESRNMNDSLIQPPSLNINLDNEINVSEMRNIVAEVSSQNTFTLILNQTEAHFTPWEVSPPPKLKRVATTNRGRKTEAAILTVSPYKMQLQESINKIQKPGKTKTRKNPIGNEKPISKASTSRRRQSLSLDDGLAPYKILFADSEDENNEFPSSNGTKCNFCDLSWGDDLTGDKWIQCLQCEIVWAHEKCMPKRSVIFICSSCGQNTI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00240610;
- 90% Identity
- iTF_00688563;
- 80% Identity
- -