Bscu006081.1
Basic Information
- Insect
- Brachyopa scutellaris
- Gene Symbol
- -
- Assembly
- GCA_949775065.1
- Location
- OX459112.1:85032004-85033914[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-09 9.1e-07 30.1 0.0 1 37 12 48 12 53 0.92
Sequence Information
- Coding Sequence
- ATGCCAAAGAAAGGAATACAAGTGAGAAAATGGGACCCCACTGCAATGGAAAAGGCACTTGTTGCCATCAAAAATAACGAAATGGGTGTGAAGCTGGCTGCCAAAACATATAACGTACCAAAAACAACATTGCAACGTATGGCACGATCTGTTAAGCCTATTAGTGATATTTTGTCCATCCCCTTGGGTCGAAAACCAATTTTTAGCAATGCAATGGAATACGAGCTCGTTAAATATTTACATGAAATGGAAAACCGTTTCTGGGGTTTAACAAGAAGCGATATTCGAAGTCTGGCTTTTCAAATggctcaaaaaaataatattcccaACAAATTTTCCCTATTGCATAAAACTGCAGGAAAAGATTGGCTTTATGGCTTTTTAAAAAGACACAAAAATGATCTAAGTTTTCGGCTGCCAACAGGTACTTCAATCGATAGAGCTAAGGGCTTTAATCAAGAAAGCGTAAACaaatttttcgatattttggaaggtgtgtatgaaaaatataactTCCCAGCATCCAGGATATGGAATGTGGATGAAACTGGTCTCACCATAGTACAAAGCAAGCAGCCACAGGTTTTAGCTAAGAAAGGAAAACGGCAAATAGGAGCTTTGACGTCGGCGGAACGTGGTTCTCTTGTAACTGTGGTGAATTGCATGAATGCAGGTGGAAATTTTATTCCACCCTATTTTGTATTTCCAAGAAAAAGACAAAACCCACTCTATATGAACAACGCTCCTGCTGACTCCAAGGCCACTTTCCATATTTCTGGATGGATTCAGTTGCCCATTTTCACGGAGTGGTTCCGTCATTTCCTGGAGTTCTCCAAGCCTTCAGAAGAGCAGCCAGTTCTTTTAATTTTAGATGGTCACTACAGCCATACCAGAAACCTGGAAGTTATTGACCTAGCGCGTCAAAATTTTGTTGTAATTATTTCCCTACCCCCACATTGCACCCATAAGATGCAACCTTTGGATAGGACATTCATGGGGCCTCTTAAAAAGTATTATAATGAAGAAATCAGACGATTCATGAGAGAGGCTGGGCGAAAAGTGGCCTTGGGTGATATAGctcagttatttaaaaaagctTATCTTAAAGTACAAACTGGACAGGTTGCAGTTAGCGGATTTAAATGCAGCGGAATTTTCCCTTTCAATAGGAATATTTTTTCCGGGGCTGATTTTATAGCATGTGAGCCTGAACCTGAGCCTGAGCCATCACCAgaagttgaagttgaaaatCGAAACGTGAATCATAATTTGATGCAACCACCGAGTTTGGAAATAAATATGGATAGTGAAATGCGGAATAATGTGGCAGCAGTAAATAGCCAAAGAACATCCACTTCGAATTTGAGCCAAACTAAAGCCCATTTTACTCCTTGGGAAATTTCTCCTCCTCCTAAATTGAAAAGGGTGGCCACCACAAACAGGGGAAGAAAAACTGAAGCCGCAATTTTGACTGTATCGCCTTATAAGAATCAGTTACAAGAAAagcCAGCAAAAACTGAAAAGCCTGTAAAGATTAAGGAGCAAAAGTCAGTCAAAACTAAGACCCTGCTAAATAAACCATCTACTTCGAGACGCCGCCAGTCTTCATCATCAGATGATAGCCTTGCTCGTTATAACATTTTATTTGCTGATTCTGAAGAAGATATTGGCGAATTTCCACCTTCAAGAGATATTAAATGTAACTTCTGCGATTTGTCTTGGGGTGATGACTTGACTGGGGACAAATGGGTTCAATGTCTCCAATGCGATATTGTTTGGGGCCATGAAAAATGCATCCCGAAAAGAAGTGCTATTTTTATTTGCAGTTCATGTGACAACACCTGCTAA
- Protein Sequence
- MPKKGIQVRKWDPTAMEKALVAIKNNEMGVKLAAKTYNVPKTTLQRMARSVKPISDILSIPLGRKPIFSNAMEYELVKYLHEMENRFWGLTRSDIRSLAFQMAQKNNIPNKFSLLHKTAGKDWLYGFLKRHKNDLSFRLPTGTSIDRAKGFNQESVNKFFDILEGVYEKYNFPASRIWNVDETGLTIVQSKQPQVLAKKGKRQIGALTSAERGSLVTVVNCMNAGGNFIPPYFVFPRKRQNPLYMNNAPADSKATFHISGWIQLPIFTEWFRHFLEFSKPSEEQPVLLILDGHYSHTRNLEVIDLARQNFVVIISLPPHCTHKMQPLDRTFMGPLKKYYNEEIRRFMREAGRKVALGDIAQLFKKAYLKVQTGQVAVSGFKCSGIFPFNRNIFSGADFIACEPEPEPEPSPEVEVENRNVNHNLMQPPSLEINMDSEMRNNVAAVNSQRTSTSNLSQTKAHFTPWEISPPPKLKRVATTNRGRKTEAAILTVSPYKNQLQEKPAKTEKPVKIKEQKSVKTKTLLNKPSTSRRRQSSSSDDSLARYNILFADSEEDIGEFPPSRDIKCNFCDLSWGDDLTGDKWVQCLQCDIVWGHEKCIPKRSAIFICSSCDNTC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00240622; iTF_00240624; iTF_00240625; iTF_00240626; iTF_01300798; iTF_01300797; iTF_00688544; iTF_00688563;
- 90% Identity
- iTF_00240625;
- 80% Identity
- -