Basic Information

Insect: Eulithis testata
Gene Symbol: -
Assembly: GCA_947507515.1
Location: OX382221.1:5547175-5550363[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 8.5 5.2e+02 1.6 1.3 2 23 126 148 125 148 0.89

2 11 0.02 1.2 9.9 2.8 1 23 154 176 154 176 0.99

3 11 0.0015 0.089 13.5 0.1 3 21 206 224 205 225 0.95

4 11 5.9 3.6e+02 2.2 2.5 2 23 284 305 283 305 0.95

5 11 0.0063 0.38 11.5 0.1 1 20 336 355 336 357 0.92

6 11 0.0084 0.51 11.1 0.2 2 23 375 396 374 396 0.97

7 11 8.6e-06 0.00053 20.5 0.9 1 23 403 425 403 425 0.99

8 11 0.0014 0.082 13.6 4.0 3 23 433 453 432 453 0.98

9 11 5.7e-05 0.0035 17.9 0.8 1 23 459 481 459 481 0.98

10 11 0.016 0.98 10.2 5.4 1 23 487 509 487 509 0.95

11 11 0.045 2.7 8.8 5.6 1 23 515 538 515 538 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	8.5	5.2e+02	1.6	1.3	2	23	126	148	125	148	0.89
2	11	0.02	1.2	9.9	2.8	1	23	154	176	154	176	0.99
3	11	0.0015	0.089	13.5	0.1	3	21	206	224	205	225	0.95
4	11	5.9	3.6e+02	2.2	2.5	2	23	284	305	283	305	0.95
5	11	0.0063	0.38	11.5	0.1	1	20	336	355	336	357	0.92
6	11	0.0084	0.51	11.1	0.2	2	23	375	396	374	396	0.97
7	11	8.6e-06	0.00053	20.5	0.9	1	23	403	425	403	425	0.99
8	11	0.0014	0.082	13.6	4.0	3	23	433	453	432	453	0.98
9	11	5.7e-05	0.0035	17.9	0.8	1	23	459	481	459	481	0.98
10	11	0.016	0.98	10.2	5.4	1	23	487	509	487	509	0.95
11	11	0.045	2.7	8.8	5.6	1	23	515	538	515	538	0.98

Sequence Information

Coding Sequence: ATGCTACCTAACACCGTGTGTATCACCTGTTATGACCTCCTTGTGGTTTCTTACGAGTTCTTTGTGAAGGCCAAGAGGTCACAAGTGATTTTGAGCGAATTGTATGAGTTGGAAGGTAGAGCTGAAATTGTGTTGGATACCCTATCTAATAATGAGCCCTTGAAGACAGAAACTGATCATGGTAATGACGGAGAGTATGTACAAGATGGTATTCCATTATTTTCACCGTATTTTGAAGATGTATACAATCAATCACCTATAAAGAAGGAAAAATATGAAAAAGCAGATATTGCAATAGATACAAAACCAGAAGAACTAATTATAAGTCCAACACCAAAATGTCGCATAACGGACACATGGGACACATATCCCTGGCAATGTGCCCTATGTGATACAAAAATGGAATCTTTAAAAACTTTAAGGGAGCACTGTCAGACTGATCATCTTAAATGCTCTGCATTCAAATGTGCAGATTGTAATAAACAGTTACACAATTTTGAAGGGTTTGTTAAGCATGTCAGGAAGCATAGGGCAAGTTTAAGGAAGTACTGCGAGTACTGCAACATACAAATAGAGAATATCGCTCATACAAGCACTCATATGATGGAAGAAAATTGCAGTTTCTGTGGCGAGACATTTAACGACGAAATATCTCTGATAACACACTTAAGGCAATACGCAGCAACGCCTTCTGGACTTCTTGCCTTCGATGTTGAGATTATAGAACTTAACGGTATACTGAACTGGGCACAATACCCCTCCATATGCCAGTTTTGTCACCTAAAAGTGGTTGATAAAAATGTGCTAAGCGAGCATTGTATTGAGGCTCATAAGAAATGTTTTGGGAGTCAGTGTGTGGACTGCAATGTTAGGGTTTCTTGTTTTAAGGATTTTTTGAAACATGTGAAGACACATCGACCGATTTTGAGAAACATCTGCCCATATTGCAACATAAACATGGGTTTTGAAGACGTCAGGCATATTAAGGAGCACACGGTTTCTCTCCACCCTTGCACATTTTGCGGCGAAATTTTCCAAAACATAAAACAGCTACAAGCCCACGAATCTACCCAAGCATTACCAAGAAAAAAACGTAGGAAAGGACCCACAGAAAACAATTCCATGTGTCAAATTTGCGGTATGATAATGAAAACACCGGCCACTATGAAAAATCATTTAAAAATGCACACGGACCGATCACGCAACTATACTTGCGATAGATGTGGAAAAGCGTACTACACCAAAGGCCAACTAGACCAACACTATAGAATACACGAAAAAATGACACAAGAAGCTTGTAAAATCTGTCATAAAACTTTTCTCACGTTATCCAGGTTAAAAAAACATGTGAAAACTCATAATTTGGAAATGCCGTTCCAATGTGATGCATGTAAAAGGGTGTTTAGCTCAAAGGACAGGTTAAGGGAGCACGTTAAGGTGCATATGGATATCATGCCGTTTAAATGTCAGTATTGCTCAAAAGAGTTTCGACATAAAAGTATAATGAAGACACATGAAAACCAACACACAGGCGCCAGACCTTATAGTTGCAACATCTGTTGCATGGAGTTCGCTAACTGGTCGAACTGCAATAAACACATGAAGAGAAAGCATGGCACAACATTGGCCAAGAACGTTATGACTCCATATGGAAAACTGGCTTTGAATCCGAAGACCGGCAAACCGGATCAGCTGGTAATGGATAATGTAGTGAAGGAATGGTCGGAAAAAATGTTGGGTCGCGAGAAAAAGAAAAATGTAATTTGA
Protein Sequence: MLPNTVCITCYDLLVVSYEFFVKAKRSQVILSELYELEGRAEIVLDTLSNNEPLKTETDHGNDGEYVQDGIPLFSPYFEDVYNQSPIKKEKYEKADIAIDTKPEELIISPTPKCRITDTWDTYPWQCALCDTKMESLKTLREHCQTDHLKCSAFKCADCNKQLHNFEGFVKHVRKHRASLRKYCEYCNIQIENIAHTSTHMMEENCSFCGETFNDEISLITHLRQYAATPSGLLAFDVEIIELNGILNWAQYPSICQFCHLKVVDKNVLSEHCIEAHKKCFGSQCVDCNVRVSCFKDFLKHVKTHRPILRNICPYCNINMGFEDVRHIKEHTVSLHPCTFCGEIFQNIKQLQAHESTQALPRKKRRKGPTENNSMCQICGMIMKTPATMKNHLKMHTDRSRNYTCDRCGKAYYTKGQLDQHYRIHEKMTQEACKICHKTFLTLSRLKKHVKTHNLEMPFQCDACKRVFSSKDRLREHVKVHMDIMPFKCQYCSKEFRHKSIMKTHENQHTGARPYSCNICCMEFANWSNCNKHMKRKHGTTLAKNVMTPYGKLALNPKTGKPDQLVMDNVVKEWSEKMLGREKKKNVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00737878;
90% Identity: -
80% Identity: -