Basic Information

Insect: Eulithis testata
Gene Symbol: -
Assembly: GCA_947507515.1
Location: OX382216.1:4243583-4245939[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0082 0.5 11.1 5.2 2 23 137 158 137 158 0.97

2 15 2.1e-05 0.0013 19.3 0.7 2 23 168 189 168 189 0.95

3 15 0.00087 0.053 14.2 1.4 1 23 195 218 195 218 0.94

4 15 0.0047 0.29 11.9 3.2 1 21 224 244 224 249 0.93

5 15 0.0006 0.037 14.7 2.2 1 23 256 278 256 278 0.99

6 15 0.00021 0.013 16.1 2.9 3 23 286 307 284 307 0.94

7 15 0.0001 0.0062 17.1 5.8 1 23 313 335 313 335 0.98

8 15 0.0018 0.11 13.2 1.4 2 23 342 363 341 363 0.97

9 15 0.21 13 6.7 10.8 1 23 377 399 377 399 0.98

10 15 4.4e-07 2.7e-05 24.6 0.5 1 23 405 427 405 427 0.98

11 15 0.00065 0.039 14.6 2.6 1 23 433 455 433 455 0.98

12 15 0.015 0.91 10.3 2.8 1 23 461 484 461 484 0.98

13 15 3.7e-05 0.0022 18.5 0.4 1 23 490 512 490 512 0.97

14 15 0.00024 0.015 15.9 2.5 1 23 518 540 518 540 0.99

15 15 0.006 0.36 11.6 0.8 1 22 546 567 546 567 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0082	0.5	11.1	5.2	2	23	137	158	137	158	0.97
2	15	2.1e-05	0.0013	19.3	0.7	2	23	168	189	168	189	0.95
3	15	0.00087	0.053	14.2	1.4	1	23	195	218	195	218	0.94
4	15	0.0047	0.29	11.9	3.2	1	21	224	244	224	249	0.93
5	15	0.0006	0.037	14.7	2.2	1	23	256	278	256	278	0.99
6	15	0.00021	0.013	16.1	2.9	3	23	286	307	284	307	0.94
7	15	0.0001	0.0062	17.1	5.8	1	23	313	335	313	335	0.98
8	15	0.0018	0.11	13.2	1.4	2	23	342	363	341	363	0.97
9	15	0.21	13	6.7	10.8	1	23	377	399	377	399	0.98
10	15	4.4e-07	2.7e-05	24.6	0.5	1	23	405	427	405	427	0.98
11	15	0.00065	0.039	14.6	2.6	1	23	433	455	433	455	0.98
12	15	0.015	0.91	10.3	2.8	1	23	461	484	461	484	0.98
13	15	3.7e-05	0.0022	18.5	0.4	1	23	490	512	490	512	0.97
14	15	0.00024	0.015	15.9	2.5	1	23	518	540	518	540	0.99
15	15	0.006	0.36	11.6	0.8	1	22	546	567	546	567	0.95

Sequence Information

Coding Sequence: ATGCTTCGAATCGAAGATCTTTGTCTCCTGGATATATACGAAAAGCTTTCCAACACAAAGCTAACGGGTGATGGGTGGCCACATACCCTATGCTATGTGTGTGCCGCTCAGCTGCAGCGATCTGCCAAGTTTGCTGCAGAGGCAAGCAGAGCTGAGAAATTCCTTAAAGACCTAGTGCAGAGTAAAATGGAGGTGACCCATGAGACAGTTGCTTCACTAAATATAGGAATCTCACAGAGCTTGTCCTTCCACACCTTAAAATCTACCTCATTCAATGGCTACTCTATAGACCCCAGCTTTGAGATGATGAATGAAGTGGTTGTGAAACAAGAAAAAAGTCCAATTGCATCTCCTAAACATGAAAGCTCATATGAAATTGATTTACCAGCAGAAATAAAAAAAATTAACAGCTGTGATGTATGCCAAAAACATTGTATGACAAAGCAAGAATTGATTACCCATTTGAAAACCCATGATATAAAAAGTAAAACAAGAGATGCAGTATGTAAAATTTGCAATAAAGACTTCTCTAACCCTAAATCACTCAAACAACATGAAACTATACACACTGGTGCTAAACCTTTTGTCTGCAAAGAATGTAGTACAGCATTCAGACTCAAACAAAGCTTACAACACCATGAAATAATTCAACATTCTGGAGAAAAGAGATTTACTTGTGACGTATGCAATAAATCCTTCTTTTTCAAAAAAGGATTGGCTGTGCACAAACAATCTCCAAAATGTCACAGTCGCTCATACAAACCCTACACTTGTAGAAGATGTGACAGCACTTTTAAGGAACTCAATGAACTTAGAGAACATAGACGAACCCATATTGGGGAACGTCAGTATGGCTGCAATAAATGTGATATGACATTCACTCAAAACAGTTATCTAAGGAGCCATAGCAAACATGTACACTCCACAGCGGCTCCATACTCCTGCCATAAATGCAGCAAGAAGTACAAAAGATTCAACTCATTGGAAATACACATGAAAAGTCATACTAAAGAACAAATGCTTGAGTGCAAAATATGTGGTTTAAACTTTTTACACATTGCTTCATTAAGGAGACATACGCGGCGGCATGAAGGAGGGCTAAAAAAGTCCTCTTCTGATGAGTACCCATACTGCTGTGACCGATGTAGCAAGAAGTTTAAGTGCagggggcatttaaaagctcatttccgaacccacacgggcgaaaagcccttcacttgtgaaacatgcggtaaacgattcaaccaacctggaagcctgcgtttgcacttgaaaatacacttcggggagaagtcattctcttgtgaaatatgtggaaaaactttcctccttaaatgtaatttaaaataccaccttcaagttcacatggaagttaaaccctactcatgtgatagatgtgaaatgaagtttAGTTTTAAATGCGCCATGGTGCAGCATATTAAACGAATTCACACCGAAGTTAAAGCGTTCGCATGTAAACAATGCGGTAAATCATATGATTTGGAATCAGATCTAGCGAAGCATCTATCACGTCACGCGGCAGAACGTATCTACTCGTGCGAAATATGCCTTAAGAAATACAAAACAGTTGACAGGTTAAAGCGACATACAAAAACCCATTCAACGGAGACGCCCTATGCTTGCGATAGATGTAATAAAGCTTTTAAGTTAGTGAGGTACTTGCAACAACATAAGAAAACTGCAGCATGTCGCGCGATATCAGCCAGTACTGCCACAGTTGAGCAGAGTATTTAA
Protein Sequence: MLRIEDLCLLDIYEKLSNTKLTGDGWPHTLCYVCAAQLQRSAKFAAEASRAEKFLKDLVQSKMEVTHETVASLNIGISQSLSFHTLKSTSFNGYSIDPSFEMMNEVVVKQEKSPIASPKHESSYEIDLPAEIKKINSCDVCQKHCMTKQELITHLKTHDIKSKTRDAVCKICNKDFSNPKSLKQHETIHTGAKPFVCKECSTAFRLKQSLQHHEIIQHSGEKRFTCDVCNKSFFFKKGLAVHKQSPKCHSRSYKPYTCRRCDSTFKELNELREHRRTHIGERQYGCNKCDMTFTQNSYLRSHSKHVHSTAAPYSCHKCSKKYKRFNSLEIHMKSHTKEQMLECKICGLNFLHIASLRRHTRRHEGGLKKSSSDEYPYCCDRCSKKFKCRGHLKAHFRTHTGEKPFTCETCGKRFNQPGSLRLHLKIHFGEKSFSCEICGKTFLLKCNLKYHLQVHMEVKPYSCDRCEMKFSFKCAMVQHIKRIHTEVKAFACKQCGKSYDLESDLAKHLSRHAAERIYSCEICLKKYKTVDRLKRHTKTHSTETPYACDRCNKAFKLVRYLQQHKKTAACRAISASTATVEQSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00686572; iTF_00737688;
90% Identity: -
80% Identity: -