Basic Information

Insect: Eulithis testata
Gene Symbol: -
Assembly: GCA_947507515.1
Location: OX382216.1:4248333-4250915[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.021 1.3 9.8 4.8 1 23 148 170 148 170 0.98

2 15 6.3e-05 0.0039 17.8 0.8 3 23 181 201 180 201 0.97

3 15 0.00092 0.056 14.1 2.4 1 23 207 230 207 230 0.94

4 15 0.0046 0.28 11.9 3.5 1 21 236 256 236 261 0.93

5 15 0.0013 0.08 13.6 4.2 1 23 268 290 268 290 0.99

6 15 9.8e-06 0.00059 20.3 2.3 3 23 298 319 296 319 0.96

7 15 6.6e-05 0.004 17.7 5.5 1 23 325 347 325 347 0.98

8 15 0.00098 0.06 14.0 1.6 2 23 354 375 353 375 0.97

9 15 0.18 11 6.9 9.6 1 23 389 411 389 411 0.98

10 15 3.9e-06 0.00024 21.6 0.3 1 23 417 439 417 439 0.97

11 15 0.0016 0.099 13.3 4.0 2 23 446 467 445 467 0.95

12 15 0.00076 0.046 14.4 1.6 1 23 473 496 473 496 0.98

13 15 3e-05 0.0018 18.8 0.3 1 23 502 524 502 524 0.96

14 15 4.9e-07 3e-05 24.4 2.5 1 23 530 552 530 552 0.98

15 15 0.00059 0.036 14.7 0.3 1 21 558 578 558 579 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.021	1.3	9.8	4.8	1	23	148	170	148	170	0.98
2	15	6.3e-05	0.0039	17.8	0.8	3	23	181	201	180	201	0.97
3	15	0.00092	0.056	14.1	2.4	1	23	207	230	207	230	0.94
4	15	0.0046	0.28	11.9	3.5	1	21	236	256	236	261	0.93
5	15	0.0013	0.08	13.6	4.2	1	23	268	290	268	290	0.99
6	15	9.8e-06	0.00059	20.3	2.3	3	23	298	319	296	319	0.96
7	15	6.6e-05	0.004	17.7	5.5	1	23	325	347	325	347	0.98
8	15	0.00098	0.06	14.0	1.6	2	23	354	375	353	375	0.97
9	15	0.18	11	6.9	9.6	1	23	389	411	389	411	0.98
10	15	3.9e-06	0.00024	21.6	0.3	1	23	417	439	417	439	0.97
11	15	0.0016	0.099	13.3	4.0	2	23	446	467	445	467	0.95
12	15	0.00076	0.046	14.4	1.6	1	23	473	496	473	496	0.98
13	15	3e-05	0.0018	18.8	0.3	1	23	502	524	502	524	0.96
14	15	4.9e-07	3e-05	24.4	2.5	1	23	530	552	530	552	0.98
15	15	0.00059	0.036	14.7	0.3	1	21	558	578	558	579	0.95

Sequence Information

Coding Sequence: ATGTCTACTCCTGTCTGCAGAGTCTGCCTTGGCAGTGGAATGCGGATGCTTCCAATCGAAGACCTTTGTCTTCTAGAGCTATACGAAAAGCTTTCCAACACCAAGCTAACTGGTGATGGATCGCCACATACCCTATGCTTTGTATGTGCCGCTCAGCTGCAGCGATCTGCCAAGTTTGCTGCCAAAGCATGCAGAGCTGAAAAATTCCTTAAAGACCTAGTGCAGAGTCAAATGGAGGTGACTCGTGAGACAGTTGCTTCACTAAATATAGGAATCTCACAGAACTTGTCCTTCCACACCCTAAAATCCACCTCATATGATGGCTACTCTATAGACTTCATCTTTGAGATGATGAATGAAGTAGTTGTGAAACAAGAAAAAAGTCCAATTGCATCTCCTAAACATGAAGAAATTGATTTAACTGTAGGAATAAAAAAAAATTACATCTGTGATGTATGCAAAAAACATTGTTTAACAAAGCGAGAATTGATTACCCATTTGAAAACTCATGATATAAAAAGTAAAaaaagaactgcactatgtaaagtttgcaataaagaattctctaacgccaaatcactcaaacaacatgaaagtattcacactggtgctaaaccttttgtctgcaaggaatgtggtacagcatttagactcaaacaaaccttacatcaccacgaaataattcaacattctggagaaaagagatttacttgtgatatctgcaataaaTCCTTCTTTCTTAAAAATGGATTGGCTAAGCACAAACAATCCCTAAAATGTCACAGTCGCTCATACAAACCCTACACTTGTAGAACATGTCACAGCACTTTTAAGGAACTCAGTGAACTAAGAGAACATAGACAAACCCATATTGGGGAACATCGGTATGGCTGCAATAAGTGTGGCAAGACATTCACTCAAGATAGTTACCTAAGGAGCCATATCAAACATGTACACTCCACAGCGGCTCCATACTCCTGCCATAAATGCAGCAAGAAGTACAAAAGATTCAAGTCATTGGAAATTCACATGAAGATTCATACAAAAGAACCATTGCTTGAGTGCAAAATATGTGGTATAAAGTTTTTACACATTGCATCATTAAAGAGACATACGCGGCGGCATGAAGGAGGGCTAAAAAAGTCCTCTTctgatgagtacccatactgctgtgaccgatgtagcaagaagtttaagtgcaaggattatttaaaaattcatttccgaacccacacaggcgaaaagccctttgcttgtgaaacatgcggtaaacgattcaacacaagtggaagcctgggtttgcacatgaaaatacacacagatgagaagtcatgttgttgtgaaatatgtgggaagagctttagtcgtatatctattttacgataccaccgtcaagtacacttggaggttaaaccttactcgtgtgatagatgtgaaaTGAAGTTCAGTTTTAAATACGCCATGGAGCAGCATATTAAACGAATGCACACGGAAGTTAAACCGTTCGCGTGTAACCAATGCGGTAAATCATATGATTTGGAATCACAACTAGAGAGGCATCTATCACTTCACACGGTAGAACACATCTACTCGTGCGAAATATGCCATAAGAAATACAAAACAAGTGACGCATTAAAACGACATATCGAAACCCATTCAACGGAGACGCCCTATGCTTGCGGTAGATGTAATAAAGCTTTTAAGTTAAAGAATTACTTGAAAGTACATATTAAGGGGTCCGCAACTTGTCGCGCGATATCGACGAATACTGCCacagttgagcagagttaa
Protein Sequence: MSTPVCRVCLGSGMRMLPIEDLCLLELYEKLSNTKLTGDGSPHTLCFVCAAQLQRSAKFAAKACRAEKFLKDLVQSQMEVTRETVASLNIGISQNLSFHTLKSTSYDGYSIDFIFEMMNEVVVKQEKSPIASPKHEEIDLTVGIKKNYICDVCKKHCLTKRELITHLKTHDIKSKKRTALCKVCNKEFSNAKSLKQHESIHTGAKPFVCKECGTAFRLKQTLHHHEIIQHSGEKRFTCDICNKSFFLKNGLAKHKQSLKCHSRSYKPYTCRTCHSTFKELSELREHRQTHIGEHRYGCNKCGKTFTQDSYLRSHIKHVHSTAAPYSCHKCSKKYKRFKSLEIHMKIHTKEPLLECKICGIKFLHIASLKRHTRRHEGGLKKSSSDEYPYCCDRCSKKFKCKDYLKIHFRTHTGEKPFACETCGKRFNTSGSLGLHMKIHTDEKSCCCEICGKSFSRISILRYHRQVHLEVKPYSCDRCEMKFSFKYAMEQHIKRMHTEVKPFACNQCGKSYDLESQLERHLSLHTVEHIYSCEICHKKYKTSDALKRHIETHSTETPYACGRCNKAFKLKNYLKVHIKGSATCRAISTNTATVEQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00686586;
90% Identity: -
80% Identity: -