Etes015259.1
Basic Information
- Insect
- Eulithis testata
- Gene Symbol
- -
- Assembly
- GCA_947507515.1
- Location
- OX382199.1:7947506-7954174[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-11 2.2e-08 33.9 0.0 2 37 16 51 15 54 0.94
Sequence Information
- Coding Sequence
- atggttcgaacctatgtgagaaaaactgaccaaggtcagtggtctcaggaagatatgagaaaagctgcagaaaaagttctgactaaacatctgactatacgaaaggcagctgacaagtatcatgtgccttataccagtttgcatagaagagttactttctcccggggtgctatcaagaatcgaggcggtcaacaaacaatggacaagggtattgaagataatttttctgatcgattgctacatttagctagtcgtggcttcggcataactccaaaacgcgttcgtaagtacgctttttcttttgtcgaacgccagaaagtaaagcataacttcaacactgaagctcgtatcgccggagaagattggtttcATCGCTTTATGAAAAGAAACCCACACTTGAGCATTCGCAAACCAGAGGGGCTGTCTAGAGCAAGGATTAATGGTATGAAGAAGGAAATAGTTGCAGAATTTTACGAAACTTTAGCTAAAGTGGTGGACGATAACGACTTGAGAGGAAAACCTGAATGTGTTTACAACATGGACGAAACTGGGGTCCCACTTAATAACCGTCCGCCTAATATTATAGCACAGAAAGGATCAAAAGATGTGGTTAGTATGACAAGCGTGGAAAGAGGACAAAATGTGACAGTTTTAGCCTGTATGAATGCTGCAGGACAGTACATTCCACCGTTTGTACTCTTTAAAGGCGTGCGCAAACGCGATGATTTCATGTTGGGAATGCCTTCGGGTACAGAAATTGCCATGACAGAAAAGGGCTGGGTCACAGAAGAAGCATTCAAGCTATGGCTGAAACATTTCAATAGATACCGGACTCAGGGAAAAGTCATTTTAATTTTGGACGGTCATTCAACTCATAGAAGCTTTGATGTGGTTGATTGGTGTGAATCTATGGATATTGAACTTGTGCTGCTTCCTGCGCATACATCACATGCCCTCCAACCACTGGATGTATCTTTCTTCAAACCACTCAAAACTTACTACAACCAACATGCAACAGCATGGCAACACGCACACCCACACCAGGGAATAACCAAAGTTGCGTTTGGTGGTTTGTTAAAACAAGCTTGGAACCAATCTGCAACAGTTGGGAATGCAGCCAAAGGCTTTGAGAAGACAGGAATATTTCCTCTTAATCCCAATGTAATCCCAGACCATAAGTTTATTGGGGACACTGTGGACCAACTTGACTCAGTTGAAGCTAATAGCCCAGTTCCTTCCACGAGTGCTCAACCCACTCCTTCTATGAGTGCTCAACAAGCTGTCATTCCACAAGAGGCAGAACCACACCAAAACCAGATCGAGAATGTCGTTAAAGAAATAATTCCTTCTCCACTGAAGAGCCCTGTAGTAACCAAAAAACCTCGCCAGGTTACTAAACCCATTTTGCATTTAACCTCCCCACAAAGCATGCACATTCTTCGTGTAAAAGACTCCAAGAAAAAAGCTGAAACAGAAAAGAAGAAATCTAAAGTAGAAGGAAAATCAAAAGGCAAAGAAAATATGACGGTTAAGAAGAAGAACAAAGCTACACCTGGACTGAAAGTAAAGAACAGCAAGTCACGTGGCGAAACAACAGATGACAACGCGTCATCGAAGCGAGTGCAGGCGCGCACCAGGCCTCTTGGCAGCTTGACATTGGACAAGGAAACATCTCGAAAGAATTACATTGTAGAAGACATTATTTTGTTTAAAGGCCGCGTGAGCTATCTTTCTTGTGGAATAGGCTGA
- Protein Sequence
- MVRTYVRKTDQGQWSQEDMRKAAEKVLTKHLTIRKAADKYHVPYTSLHRRVTFSRGAIKNRGGQQTMDKGIEDNFSDRLLHLASRGFGITPKRVRKYAFSFVERQKVKHNFNTEARIAGEDWFHRFMKRNPHLSIRKPEGLSRARINGMKKEIVAEFYETLAKVVDDNDLRGKPECVYNMDETGVPLNNRPPNIIAQKGSKDVVSMTSVERGQNVTVLACMNAAGQYIPPFVLFKGVRKRDDFMLGMPSGTEIAMTEKGWVTEEAFKLWLKHFNRYRTQGKVILILDGHSTHRSFDVVDWCESMDIELVLLPAHTSHALQPLDVSFFKPLKTYYNQHATAWQHAHPHQGITKVAFGGLLKQAWNQSATVGNAAKGFEKTGIFPLNPNVIPDHKFIGDTVDQLDSVEANSPVPSTSAQPTPSMSAQQAVIPQEAEPHQNQIENVVKEIIPSPLKSPVVTKKPRQVTKPILHLTSPQSMHILRVKDSKKKAETEKKKSKVEGKSKGKENMTVKKKNKATPGLKVKNSKSRGETTDDNASSKRVQARTRPLGSLTLDKETSRKNYIVEDIILFKGRVSYLSCGIG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01339949;
- 90% Identity
- iTF_01339950;
- 80% Identity
- iTF_00686263; iTF_00686264;