Etes002113.1
Basic Information
- Insect
- Eulithis testata
- Gene Symbol
- -
- Assembly
- GCA_947507515.1
- Location
- OX382205.1:459129-463021[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.7e-11 8.7e-09 35.2 0.0 4 39 168 204 165 208 0.90 2 4 5.3e-11 2.6e-08 33.6 0.3 2 39 220 257 219 260 0.92 3 4 2.2e-16 1.1e-13 50.8 0.1 2 45 275 319 274 319 0.96 4 4 1.5e-17 7.7e-15 54.5 0.0 1 44 326 370 326 371 0.96
Sequence Information
- Coding Sequence
- ATGTCGAGCTCTGGATGCGCTGCCGTAAAATGTGAACCTCCATCTGATGAAGAAGATGATAGCCTTCAGTTACTCCATAAGACGTTTTCATCAGAACTCCATGCACTCACTTCTGTAAAAATAGAAGCAGGTTACCACAACGATGAGGGTATCCCGGCATTGTTTCAACACTTACAGCGTCCTGAAGGGCTGGAAGAGCTGGCCCCGTTGGCACCAGCCGGGCCCGCTGCCACTCCCGTTTGTGTGAAACAGGAGGTCGTGGAGACACCAGCCGTCAGTCTGGAGACCTTGGAGCCTGTACCACATAGCACGGGATCGTTGTTAGAAAGACACATGGCGATATTGAGGTCATCTGAAGTGCCCGACTCCGCAAACTTCACGCCGCTGCTCTCGACGGTAAAGGATGAACCGTCCTCTGAGGGAGAACAGCAGTCCCTGAGTGCTGACGAGCTGGGCGAGTCGTGTGCTCAGCGCGCGCCCGCCAAGGCGTGGTCCCAGCAGGACATGGACCATGCACTCGATGCGCTACGCAACCACAACATGAGCTTGACTAAAGCGTCATCGACATACGGCATCCCGTCGACGACGCTGTGGCAGCGTGCGCACCGGCTCGGCATTGACACGCCGAAGAAGGAAGGCGCTGCCAAGTCGTGGAGCGAGGCCGACCTGCGCGGCGCACTGCACGCGCTCAGAGCCGGCGCCATATCAGCTAATAAGGCCAGCAAAGCTTATGGTATCCCGAGCAGCACGCTGTACAAGATAGCTCGGCGCGAAGGCATCCGGCTGGCTGCGCCATTTAACGCGGCTCCCGTAGCGTGGCGGCGAGGTGACCTGCAGAGAGCATTGGCTGCCATCCGCTCGGGCCGTGCCTCCGTGCAGAGAGCCGCCTCACAGTATGGAATACCCACTGGTACACTCTACGGGCGCTGTAAGCGAGAAGGCATAGAGTTGTCCCGATCGAACCCCACGCCGTGGTCTGAAGATGCTATGGGAGAGGCACTGGAAGCCGTCAGGATCGGTCAAATGTCAATAAACCAGGCTGCCATTCATTTCAACTTGCCGTATTCTTCACTTTACGGAAGATTCAAGCGATGCAAGTATCAGGTTCAGACAATGGCGCAGCAAGAATTGCAAAACCGTCCCGAAATGGCCAGCCAGCAAGAAATGAGCTACTACCATCAAATGCCAATGTACCCCGACCACGAGCATCCTACCGTCCAACATACATTGTCTCACGAGTACGCCCAGGATCCCTCGAGTAACATCCAAGAGCCGTACTCGCAGGCAATGTATTACAACCAAAATTTTAGCAGCATAGTGACTAGCTGA
- Protein Sequence
- MSSSGCAAVKCEPPSDEEDDSLQLLHKTFSSELHALTSVKIEAGYHNDEGIPALFQHLQRPEGLEELAPLAPAGPAATPVCVKQEVVETPAVSLETLEPVPHSTGSLLERHMAILRSSEVPDSANFTPLLSTVKDEPSSEGEQQSLSADELGESCAQRAPAKAWSQQDMDHALDALRNHNMSLTKASSTYGIPSTTLWQRAHRLGIDTPKKEGAAKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPVAWRRGDLQRALAAIRSGRASVQRAASQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHFNLPYSSLYGRFKRCKYQVQTMAQQELQNRPEMASQQEMSYYHQMPMYPDHEHPTVQHTLSHEYAQDPSSNIQEPYSQAMYYNQNFSSIVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00737387;
- 90% Identity
- iTF_00737387;
- 80% Identity
- -