Basic Information

Gene Symbol
ct
Assembly
GCA_947507515.1
Location
OX382214.1:894669-928918[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.5e-27 3.7e-23 81.5 0.0 3 70 344 412 342 419 0.94
2 3 4.1e-32 4.2e-28 97.4 0.0 4 77 746 820 744 822 0.96
3 3 5.9e-31 6e-27 93.7 0.0 3 75 948 1021 946 1025 0.95

Sequence Information

Coding Sequence
ATGAACGTCTGGCGTAGTCTGCGAACCAGTCATTTTGTTCGGATCGCTCAACTAGTAGAAGACGTGCGCAGGCTACAAGCATCGCTTTCAGCGCTGCAAGAAGCGCACGCACAGCAGCTGCAGCGGCTGGAAGAAAGGCTGGATGAGAAGAAACAACACATAGCCCGGTTGGAAGCCAGGCTAGACGGTCAGCGGGACTATGATGATGTGAAACGGGAGATCAATATGTTTGCTGCCGTTCCTAAGAAATGTAAAGTCAATATGAGAGTTTGTTTGAAGTTTGGAGCATGTGGGATTGAGGCGGGACTGACCGATCGATCTCATTGGTCAGTCCGGATGGGCGGAGCCGTTATCGGCGATCGACTGATAACCGATGCTGACGTCACTGCATTGTTCGAGAGATTACTAGTTATTTTCCGAAGCATGCTCCGCTCATTAGACCTCGGTCCGAGTGAGCGCATTGAGCGGATCGAGCGGAACGAGCGGTTCGAGCGGAACGAGCGGATCGAGCGGCTCGAGCGAATCGAGCGAAAGCCCGAACGCTCGCCGAGCGTAGCACCGACGCGCGACGAACGGTGCTCAGTCGAGCGCGAGCGAAGCGTTGAAAGAAGAGAACCAGCGCGGTTCCCATCACTAGCCCGCGGCGTGCGCATCGGGCAACATATAATTCGGAGCGTGAGACAAAAACGCCGCGAGGTTAAAAATTCGTTCGCATTCGTGTCCTCCCCTCCCCTCCTCGCGTCCCCTGACCGTGCTCTCACCGCAGGTCCCGAGGAGTGGCCAAGCACGCCCCCGCTCAACAACAACACGACACATCACAACAACAACGGGCCGACGCCGCTGCCGCTGCCGCCGCCGAGCCCCTTTCGCTTCGACGACCACCGACCTTACCGCTTCGCCGACGACATGGGTCCCCTACCGCCCGGCGCGCTTGTCGGCCGACTCGGCGACTCCCTCATCCCCAAAGGAGATCCCATGGAAGCGAGACTCCAAGAAATGCTCAGATATAACATGGACAAGTACGCGAACAGTAACCTGGACACGCTTCACATCAGTCGGAGAGTCAGAGAACTGTTGTCCGTCCATAATATCGGACAGAGATTGTTTGCGAAGTACGTCCTGGGCCTATCGCAGGGGACGGTATCGGAGCTACTGTCAAAACCGAAGCCCTGGGACAAACTAACGGAAAAGGGAAGAGACTCGTACAGGAAAATGCACGCGTGGGCTTGCGACGAGGCTGCGGTGATGCTACTCAAGTCACTGATCCCCAAAAAAGTTGGTTCAAAAGACGGCAGTATTGGACCTGGGGGCTTCGGAAGGTCCGATGGCGAAGGAGATGATAGACTGGCGCATATTCTCAATGAGGCTTCGCATATGATGAAAACCCCCACGGGACCCCCACACAACGATGATTCTAGAAGTAATGAAGACTCCAGCTCACCTAGGACGCAATGTCAATCACCTTTTTCAAAGGACTCAAGTCAGAACAGAAGGCTAAAGAAGTACGAAAACGATGACATTCCTCAAGAGAAGGTGGTTCGCATCTACCAGGAGGAGCTCGCCAAGATCATGACGAGGCGGGTGGAGGATATCCGTCACAATCGAGAAGGCTTCCCTGGTATGTTTCCCCCTTTTTTCAGCGGTGGTATGCCCCCACACATGGAGAGGCCGCCCGAAGACATCCGGATGGCTCTGGAAGCGTACCACAGAGAGCTCGCCAAGATCCAGCCCGGCGGGAACATTCCCAACCTGCACAACCTGCCCGGCATGCCTCCCTTCCCTAACCTGCTGGCCCTGCAGCAGCAGGCCATGCAGCAGGCGCAGAGCCAGCACATCAACGGTGCTGGCGCGGTCCAAGATCTCTCGCTCCCCAAGGACAAGAGCGTCAAGATGAACGGAATGACCGATAGCGATAAGGATAGATCGATGGACGCCGAGGAGGCGATCCGGCATGCAGGGAGCGCGTTCTCACTGGTGCGGCCCAAGCTGGAGCCCGGCCAGCACTCCACCGGCTCCTCCGCCTCCAGCCCTCTAGGTAACGCTATACTACCGCCCGCGATCACACCTAATGAGGACTTCAATAGTTCGGCAGCCGCGAGCCCGCTGCAACGGATGGCCTCCATCACCAACAGTCTGATCTCTCAGCCGACCAACCCGCCGCACCACACGCCCGCTCAGAGGTCCATGAAGGCGGTATTGCCGCCTATCACGCAGCAGCAGTTCGACCTTTTTAACAACCTCAATACCGAGGACATCGTCCGGAGGGTCAAGGAAGCTTTGAGCCAGTACTCTATAAGTCAGCGTCTCTTCGGCGAGTCGGTTCTGGGGCTGTCGCAGGGCTCCGTCAGCGACTTGCTGGCGCGGCCGAAGCCCTGGCACATGCTGACCCAGAAGGGCCGAGAACCCTTCATCAGAATGAAGATGTTCTTGGAAGACGATAACGCGGTGCACAAACTAGTCGCGTCACAGTACAAAATCGCGCCGGAGAAGCTGATGAGGACCGGAAACTACAGCGGAGCACCGATATGTCCGCCAATGAACAAGCCGATGCCTCCAACGCAAAAGATGATCTCAGACGCCACCTCCCTCATCAACAAGATGCAGCACGAGCAACTCCTCGGTCCCGGCCACCTCGGGCACCTCGCCCACCAGCCTCCCCCTCTCCTGCTGACTCCCCCCGGCTTCCCCCCACACCACGCGGTGACGTTACCCCCCCAGCACCACGAGAGCAACAACAAGGATAGGAAGCAACAGCCTCCTCAACAACACCACCAGCCCCCGATCATGCGCAGCCTTCACCAACACATATCCCCCAGCGTCTACGAGATGGCCGCTCTGACGCAAGATCTCGACACGCAAACGATCACGACCAAAATCAAGGAGGCTCTGCTAGCGAACAACATCGGTCAGAAGATTTTCGGGGAAGCCGTCCTCGGGTTGTCGCAAGGGTCGGTGAGCGAGCTGCTATCGAAGCCTAAGCCCTGGCACATGTTGAGCATCAAGGGCAGGGAACCGTTTATCCGAATGCAGCTCTGGCTGAGCGATGCGCACAACATCGACCGTCTTCAAGCTCTGAAGAACGAACGGCGAGAGGCTAACAAGCGACGGCGCTCCAGCGGACCCGGCCAGGACAACTCCTCAGACACGTCATCCAACGACACGTCGGAGTTCTACCATTCGAGCTCGCCCGGTCCCACCGCTGGGGCGCCATGCGCTAAGAAGCAACGAGTGCTATTCTCCGAGGAACAAAAGGAGGCATTAAGACTGGCGTTCGCCCTGGACCCGTACCCTAACATGCCGACGATAGAGTTCCTCGCGTCAGAACTGGGGCTGTCGACGCGAACGATAACCAACTGGTTCCACAACCACCGGATGCGGTTAAAGCAGCAGGCGCCGCACGGCTTACCAGCCGAGCCCCCCGCACGGGACCAGTCCTCGGCGCCTTTTGATCCGGTGCAGTTCCGTCTTCTCCTTAACCAGAGACTACTGGAACTGCAGAAGGAGAGGATGGGCCTGGCGGGGGTTCCCCTTCCGTACCCTCCGTACTTCGCGGCGAACTCGAACCTCGCGGCGTTGATCGGCCGAGGGTTAATCCTTCCCGAAGAAGCGACCAAGGACCAGAGCGGCGGCCTCGATCTCTCGATGCCGCTGAAGCGGGAGCCCGACGGCGAGGATTACGAAGACGATGACGTCGAGAGCAACCTCGGATCCGAGGATTCGTTGGACGATGAGTCAAAGACTGAGCCCAAGGCGGCGTCGACGCCGCAGGGGCGCTCTAGCAGACGGAAGCCCGCGGCACCGCAGTGGGTGAACCCCGACTGGCAGGAGGACAAGCCTCGCAACCCCGACGAGGTGATCATCAACGGCGTGTGCGTGATGCGCAGCGACGACTACCGCCGCGAGGCGCAGGAGACCGTGCGCGTGGAGCCCTCGCCCGTGCCGCGAGAGTGCACGCCCCCCGCGCCCTCCGCGCCCTCCGTGCCGGCGCCCCCGCGCACGCCCCTCGCCCCTCTAACGCCCCTCACGCCCCTCACGCCGCACACGCCCGATGACGTCATCCCCGAGGATAAGATCAAGTCCGAGACGGACGACGACCGGTGGGACTACTAG
Protein Sequence
MNVWRSLRTSHFVRIAQLVEDVRRLQASLSALQEAHAQQLQRLEERLDEKKQHIARLEARLDGQRDYDDVKREINMFAAVPKKCKVNMRVCLKFGACGIEAGLTDRSHWSVRMGGAVIGDRLITDADVTALFERLLVIFRSMLRSLDLGPSERIERIERNERFERNERIERLERIERKPERSPSVAPTRDERCSVERERSVERREPARFPSLARGVRIGQHIIRSVRQKRREVKNSFAFVSSPPLLASPDRALTAGPEEWPSTPPLNNNTTHHNNNGPTPLPLPPPSPFRFDDHRPYRFADDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANSNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAVMLLKSLIPKKVGSKDGSIGPGGFGRSDGEGDDRLAHILNEASHMMKTPTGPPHNDDSRSNEDSSSPRTQCQSPFSKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRVEDIRHNREGFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNLHNLPGMPPFPNLLALQQQAMQQAQSQHINGAGAVQDLSLPKDKSVKMNGMTDSDKDRSMDAEEAIRHAGSAFSLVRPKLEPGQHSTGSSASSPLGNAILPPAITPNEDFNSSAAASPLQRMASITNSLISQPTNPPHHTPAQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPICPPMNKPMPPTQKMISDATSLINKMQHEQLLGPGHLGHLAHQPPPLLLTPPGFPPHHAVTLPPQHHESNNKDRKQQPPQQHHQPPIMRSLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTAGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLASELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLILPEEATKDQSGGLDLSMPLKREPDGEDYEDDDVESNLGSEDSLDDESKTEPKAASTPQGRSSRRKPAAPQWVNPDWQEDKPRNPDEVIINGVCVMRSDDYRREAQETVRVEPSPVPRECTPPAPSAPSVPAPPRTPLAPLTPLTPLTPHTPDDVIPEDKIKSETDDDRWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2