Egla016218.1
Basic Information
- Insect
- Eugnorisma glareosa
- Gene Symbol
- -
- Assembly
- GCA_947578425.1
- Location
- OX387983.1:8474661-8497159[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.01 0.86 10.8 0.1 3 23 259 280 258 280 0.93 2 23 0.093 8 7.7 0.1 2 23 306 328 305 328 0.96 3 23 0.00015 0.013 16.6 1.6 1 23 350 372 350 372 0.98 4 23 0.0064 0.55 11.4 0.5 1 23 376 399 376 399 0.98 5 23 0.022 1.9 9.7 0.9 2 22 405 425 404 425 0.95 6 23 0.3 26 6.2 3.3 1 23 432 455 432 455 0.96 7 23 0.0092 0.79 10.9 1.9 1 23 462 484 462 485 0.96 8 23 1.7 1.5e+02 3.8 0.2 3 23 528 549 526 549 0.87 9 23 4.2 3.7e+02 2.5 0.2 3 21 577 595 577 598 0.82 10 23 0.15 13 7.1 1.7 2 23 621 642 620 642 0.95 11 23 7e-07 6.1e-05 23.9 0.6 1 23 646 669 646 669 0.94 12 23 0.59 51 5.2 0.2 3 20 675 692 674 694 0.91 13 23 0.017 1.5 10.1 2.8 1 23 701 724 701 724 0.93 14 23 0.002 0.18 13.0 1.5 1 23 733 756 733 756 0.94 15 23 0.86 74 4.7 0.7 1 14 761 774 761 775 0.89 16 23 0.68 58 5.0 0.3 2 23 805 827 804 827 0.94 17 23 2.2e-05 0.0019 19.1 0.4 1 23 922 945 922 945 0.96 18 23 0.079 6.8 8.0 0.5 3 20 952 969 951 971 0.93 19 23 8.1 7e+02 1.6 6.7 3 23 980 1001 978 1001 0.90 20 23 0.061 5.3 8.3 2.6 1 23 1008 1031 1008 1031 0.94 21 23 0.0033 0.29 12.3 2.0 1 23 1036 1058 1036 1058 0.96 22 23 9.6e-06 0.00083 20.3 0.4 1 20 1064 1083 1064 1086 0.94 23 23 3.3e-05 0.0028 18.6 3.1 1 23 1092 1115 1092 1115 0.97
Sequence Information
- Coding Sequence
- ATGGATACTAAAACAACGGAATGGAGAGCCGGCCCAAATGTTTGTCGTTGTTGTTTGACCGAAGGGTGTTACAAAGATATTTCTACGGAATATTTCTGGATGGGAAAGCGGGAAGTGTACGCTGAAATGCTTTCAAATACCCTCAACGTATCAATCGCATACTCCCAGTCCGGAGGCCCCAACAGCAACAGTCGTCTGATCTGCGAGCTCTGTATATCTCGGCTGCGGGACGCTTCAGACTTCAAGCGGCAGGTGCTGGAGTGCGAAAAGACTTTTATGCAGCATCTGGATGCTGGGAGTTCTGCGATTGCGGACGTTGAGGTTCAAGTAGAAGCGGTAGACTCTGACGTCAAATTGGAGCGAGTGAAACAAGAGAAGCAACTCAGCGATGACGATGATGACTTTGAAGAACGATTGGGCTTCGACGATGATGACGATGACGACCTTGACGACGAACCCCTGACAAAATTAGCGAGCAAAATACCCAAAAAGGAATCAGTGGATCTACTAGACCTCATCGACAACACTAAGGCTACGGCAAAACGGAAATCTACAACGAAAACTAAGTCGGTTGCGGCAAAAAAAACTAAAAGTCTCAAAAAGGAGCCTATTAAGGCTGGAGCTAGTAAATTGGCTGGGGCTAGTAAATTGGCTGCCGCTAAAACGGAGAAGAAGAAAAAAGCGGAAAGCTATGACGCGACGCGCTCAAACGCCGAGACAATTATCAGTAGCACTACTGCTTACCCCTTCAGAGTGAACGATAAGTCCATACTTTGTGTCTACTGCCAAGAGTTGTTCGAAGACCCTGACGAGTTCCGGAGACACATGGACGGAGAACATGACTACTTTAGCATCAAAGTCGCGTTCCACCACCTCCCAAAAACGGAATTTATTAAAGCAGATCTCACTAACCTACGATGTCGGTTGTGCAACAGCAGTTTTCCTACTCTAGAAACGGTTTTGGCGCATTTAGAGACGGAACACGGGAGAAAAACGGACCCGAGTGGCAAATTTGGCGTAATGCCGTACTTACTGACAAAGGACGTTTATAACTGTGCAGTTTGTGAGAAGAACTTTCCTTCTCTCTTTCATCTAAACAGACACACAATCACACACTTTCTAAGTTACGTTTGCCATGTATGTGGCAGCAGTTACGTCGCAACAACCGGCTTACTAAGACACGTGAGATCGAAACACCAAATATACGAAGTATCTTGCAAGAGATGCAAGAAAAGTTTCCCTACGATGGAAGCCAAAGAGAAACATAGACGAACGCAGAAATCTTGTATGCCTTACTGCTGCCCGAAATGCCAGGAAAGATTCCTGGATTATAAAACGAGGAAGAAACACATGGAGGTTGAACATGGTCAGTCGAAACGTACATATCGTTGTGTGGATTGCAATATCGAGTTTACCACAGAAAATGCATATTATGATCATTATAAACTTCATCATTCTGAGGACTGTGCGGTTTGCAAACATTGCGAGTTCGATCCATTGGTCGAAGCCAGACATAATGCTAAGCTCGTTCTGAGATACACAACCGCTTATCCATTCAGGATACCTGCTCACGAAATGGTGTGTGTTTACTGCTGCGACGCTTTCGAAGACCCGGCGGCTTACAGAGACCACATGAAAAAAGACCACTACCAACCCAACGTCAAACATGCTTTCTCACACGCCGTGGGGACAGAGGAATACCTCAAAGTTGATTGCACAGATCTAGGATGCAAAATCTGCGCTAAAAAGTTCGAATCTGTAACTTCTGCATCAGAACATCTCGTCTTAGAACATGACAAGCAATTAAATCTTAACGCAGAGATCGGGCTGCAAATCTTCAAGTTAGGGGCCGAAAGATGGGTTTGTGCGACTTGCTTCCAAAAGTTTCCGTCTCTCAGATGCTTATCGAGGCATACTAACGGGCACTATCACAAGTATACATGCGAGACTTGTGGCAAATCCTACATCAGTCGAGACAACTTGAAAAGGCATATTCTCTTCGGTCATACCGAGGAAAAGTTTTGTGCGAAGTGTCGAAAGTCCTTTCCTAATATCAAAGAACGCCGTGCCCATGTCTTGGAAAGCAAAAGATGCTGGCCATTCTGCTGTACTGTTTGTGGACACAGATTTGTCTCGAGAAAGCTGAGACAAGAGCACATGGCCGAAGCCCACAATGTAGAAATCAAGAATAAACTCTACAATTGCCCTGAATGCCAGGAATCTTTCACTGAGTATGGACATTACAGATCACACTTTATAATAACTCATACGGACGATAACTACGTCTGCCAATTCTGCGGAATAAAATTCGCGAAGAAGCAAAATGACCCGAATTTCATCTCGAAACGGAACGCCGAGATTATTGTGAAATATTCCACCGTTTACCCGTTCAAGCTGCCTGAAGACAACATGGTTTGTGTTTACTGTTGCGAGACCTACCCGGACCCCGATGTCTTTAGAACGCATATGAACGAGGAACACGAAACTTTCAACCCCAAAATGGCTTTCGTACATTGTTCCGAAGGATACATTAAAGTTGACTGCACTAATATCAACTGCAGACTCTGCTTCAAACACTGTCAGGATTTGGATCAAATCGCAGATCACCTCTTGTCCGAACATAAGAAGCCTATTAACTTAACCATCGCGTTAGGTCTACAACCTTTTAAGTTAGAGCACAATAAGCTGTTCTGTGCAATATGCCACTACAAGGCCGTATGCTTACGGCAGTTATCCCGACACACACAGAGCCATTTCTGGAGGTATACTTGCGAAGCCTGCGGAAAATCATACGCAACCAACACAGCATTACGCAGTCATATAAGATTCTCACACATTGGCGCCGAAAAGATTTGCCGCAAATGCAAACGCACTTTTAGCTCTATAGAGGAGAGACGAAAGCATTTACTGGAGTCTCGGAAATGCTGGTCTCATCTATGTTGTGTTTGTGGCGAAAGATTTATGTCCTGGCATGCCAAACAACAACACTTGACCGAGTGCCATAGCGTTGAAAAGAAAGCTTACGTGTGCCCGGAATGTGGGCAAATTTACCATGAGCGCAAGAAGTATAGGACACATTTTAAACTCAATCACACTGATGATAATTACGTCTGCTCTTGCTGCGGTATGAAATTCGTTACCAAAAAGAATCTGGAGGAACACAGAGTTTCTCATACCATGGAGAAACTCTTTCCGTGTACGGTTTGCTCCAAATCGTTTCCTAGGAAGAAGAATTTGATTCAGCATATGTGGATTCACATGGAACATAAAAGGTTTGAATGTAAACTATGTAATAAGAAATTCAATCAGAAAGTCAGTTGGAAGACGCATATGAAATCGTATCATCCCGAGTTAGAGGGTATAGAGGAAAAAAATGCCGATAATCTGAAATTAGTGTTTTCTGTTTTAACCGAATAA
- Protein Sequence
- MDTKTTEWRAGPNVCRCCLTEGCYKDISTEYFWMGKREVYAEMLSNTLNVSIAYSQSGGPNSNSRLICELCISRLRDASDFKRQVLECEKTFMQHLDAGSSAIADVEVQVEAVDSDVKLERVKQEKQLSDDDDDFEERLGFDDDDDDDLDDEPLTKLASKIPKKESVDLLDLIDNTKATAKRKSTTKTKSVAAKKTKSLKKEPIKAGASKLAGASKLAAAKTEKKKKAESYDATRSNAETIISSTTAYPFRVNDKSILCVYCQELFEDPDEFRRHMDGEHDYFSIKVAFHHLPKTEFIKADLTNLRCRLCNSSFPTLETVLAHLETEHGRKTDPSGKFGVMPYLLTKDVYNCAVCEKNFPSLFHLNRHTITHFLSYVCHVCGSSYVATTGLLRHVRSKHQIYEVSCKRCKKSFPTMEAKEKHRRTQKSCMPYCCPKCQERFLDYKTRKKHMEVEHGQSKRTYRCVDCNIEFTTENAYYDHYKLHHSEDCAVCKHCEFDPLVEARHNAKLVLRYTTAYPFRIPAHEMVCVYCCDAFEDPAAYRDHMKKDHYQPNVKHAFSHAVGTEEYLKVDCTDLGCKICAKKFESVTSASEHLVLEHDKQLNLNAEIGLQIFKLGAERWVCATCFQKFPSLRCLSRHTNGHYHKYTCETCGKSYISRDNLKRHILFGHTEEKFCAKCRKSFPNIKERRAHVLESKRCWPFCCTVCGHRFVSRKLRQEHMAEAHNVEIKNKLYNCPECQESFTEYGHYRSHFIITHTDDNYVCQFCGIKFAKKQNDPNFISKRNAEIIVKYSTVYPFKLPEDNMVCVYCCETYPDPDVFRTHMNEEHETFNPKMAFVHCSEGYIKVDCTNINCRLCFKHCQDLDQIADHLLSEHKKPINLTIALGLQPFKLEHNKLFCAICHYKAVCLRQLSRHTQSHFWRYTCEACGKSYATNTALRSHIRFSHIGAEKICRKCKRTFSSIEERRKHLLESRKCWSHLCCVCGERFMSWHAKQQHLTECHSVEKKAYVCPECGQIYHERKKYRTHFKLNHTDDNYVCSCCGMKFVTKKNLEEHRVSHTMEKLFPCTVCSKSFPRKKNLIQHMWIHMEHKRFECKLCNKKFNQKVSWKTHMKSYHPELEGIEEKNADNLKLVFSVLTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00974022;
- 90% Identity
- -
- 80% Identity
- -