Egla002185.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eugnorisma glareosa
Gene Symbol
-
Assembly
GCA_947578425.1
Location
OX387962.1:21493278-21495644[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.5e-09 5.6e-06 26.6 0.0 2 37 18 52 17 57 0.91

Sequence Information

Coding Sequence
ATGGGCCGAACAAAATTAGATAGATCTGCGAGGAAAAAAGGATCCCACCTACCTCAAGCAATGAAGGCTGCAGTCAATTTACATCTTAACGGTATGAGCTTGAGAAAGGCTGCAAAAGATAGCAACATTCCATATCCTACATTAAGAAGATATGTGTTAAAATATATGAAAGACAATTCTGCTTCGATGGAACCAAACTACAGCGTAAATAAAATATTCACGGAGGAGCAAGAAACAAGTCTAAAGATTTATATTCTTGATTGTGCCAACAAATTTTATGGTTTAAATACAAAGGAATGCAGAAAACTCGCCTTGCAAATGGCGGAAATGAATAAACCCGAATATCCCTCTAGTTGGAAAGAAAAAGGAATGGCGGGTAAAGACTGGTTACGTGGATTTAAAAAAAGGCACCCTGATTTGTCCATTAAAAAACCAGAAGCATGTAGTATTGCACGAGCCACATCATTCAATCCTACGAATGTCAAATCATTTTTTGACAACCTTCAAGAAGTGTATGGAAGATTTCCACAATTTGGTGACGGCACTAGAGTTTATAATCTGGACGAGACATCTACTACCACAGTACAACGGCCTGGAAAAGTGATAGCCCAAAAAGGTAGAAATATCGCTAAGATTACTAGTGGTGAGCGTGGGATTTTAGTAACTACGTGTTTCATCGTTAATGCAACAGGACACGCGCTCCCACCTGTCATGATTTTCCCTCGTAAGAAATACGTAGCGCACATGATTAGGGGCGCACCTACTGGAACGTTAGGATTGGCTTCTAAGACAGGTTGGATGAATAGTGATCTTTTTGTTGAAACGATGAAACATTTCGTGAAATTCACAGCGTCTTCTAAAGACAATCCATCATTATTACTTATGGATAACCATGAAAGTCATCTCTCGATCGAAGCGCTTGACATTGCAAAGAAATCGGGAGTCACAGTTCTGACGCTGCATCCGCATACTACAAACAAGCTCCAACCACTTGATGTTGGCGTAAACGGACCTTTCAAATGCTATTATAATGCTGCTGTTGACTCGTGGCTGTTACGCAACCCGGGGAGACCCATTTCTATATATGATATAGCTGAATGCGTCGGAGAAGCATACTTGAAAGCGTTAAGCCCAATAAATATAACAAACGCTTTCAAAAAATGTGGTATTTTTCCATTTAATAGAGAGATTTTTTCGGAGTTAGACTTTTTGCCGAGCAATGTCACAGACAGGCCAGAACCAATATTAAATGAAACAACACCAACAAATATACATGAAGACGACGCTACAAGCTGTGCTACAAGCCTGTCGGATGTTTCAGAACTGAATGCAGATCAAGACCCGGCTGAATATAGAACGTCTTCCCCTTCTCTACTTACTAACAGTTTTGACCAAAACACGGTTGAACCTAGAAACTTACTTTCACTGTCTCTTGAAGCAACATCTTTAGCAACAATGAAAGATCTATTTCAGTTTGAAAATGCTTCTTCTGCATCCGTAATAGATTTTTATGAACCTACAAGTCTTTCTTCAAGTAATACGCTTTTGCAAACTGCGCTAGTTGTAAGTTCAAACTCAAAATCAGACTCAAGTGCGCCCGATAAGTCTACCACTCAATGTGATGTTGTTAGACCAAGTACCAGTAGAAAATCGCCGGACAGATCTCAACCTTGTACAGGAATTTTTTTTTCACCGAAAGATTTTAGACCAATTTTAAAAGCAGGACCACGAAATATTAGAAAAGGTGGAAGAAAAGCTGGCAAAAGTATGATTGCAACCGACACGCCAGAAAAGAATGCTCTGGCTGAAAAGAAAAACAAGAAGTCTAAAAAAACAATAAAGACTGAAGCAGTAAAAAAAGTTACACATAATTTATTCAAAGGAAAGGAAAATACTTGTAAACGACGAAAGAGAAATGTGACCCCAGTTGAATCGTCGGATGAAGATCAAGAAGAATTTCAGGCAAGTGGATCATCTTCTGGCGGTGAGATGAATGAGAATACAAGTAATTCTGATGAAGATGAGATAGTTCTGAAAGATGATTTTCCACCACTTAAACGTAGTCCCCGTGAAAATGACTTTGTTATAATACTTTTTAAAACAAAAAATGAAAAAATCTATTACGTCGGTAAAATTCTGGAAATTTTAGATGATGAAGAAGATTGTGATTTTTATGTATCCTACTTAAAATTAAGAAGTAAGGTTCAACAGAAATTTACTGATCCAAAGGAACCTGATACGGCTGGTGTTAATATTGCGGAAATTAAGTATATTCTGCCATTTCCTAAAATTGAAAATTCTAATAATCGACGTCAAACTACTTACAGATTTCCTGTTGATATCTCTCTTTTAAATATGCGATATTAA
Protein Sequence
MGRTKLDRSARKKGSHLPQAMKAAVNLHLNGMSLRKAAKDSNIPYPTLRRYVLKYMKDNSASMEPNYSVNKIFTEEQETSLKIYILDCANKFYGLNTKECRKLALQMAEMNKPEYPSSWKEKGMAGKDWLRGFKKRHPDLSIKKPEACSIARATSFNPTNVKSFFDNLQEVYGRFPQFGDGTRVYNLDETSTTTVQRPGKVIAQKGRNIAKITSGERGILVTTCFIVNATGHALPPVMIFPRKKYVAHMIRGAPTGTLGLASKTGWMNSDLFVETMKHFVKFTASSKDNPSLLLMDNHESHLSIEALDIAKKSGVTVLTLHPHTTNKLQPLDVGVNGPFKCYYNAAVDSWLLRNPGRPISIYDIAECVGEAYLKALSPINITNAFKKCGIFPFNREIFSELDFLPSNVTDRPEPILNETTPTNIHEDDATSCATSLSDVSELNADQDPAEYRTSSPSLLTNSFDQNTVEPRNLLSLSLEATSLATMKDLFQFENASSASVIDFYEPTSLSSSNTLLQTALVVSSNSKSDSSAPDKSTTQCDVVRPSTSRKSPDRSQPCTGIFFSPKDFRPILKAGPRNIRKGGRKAGKSMIATDTPEKNALAEKKNKKSKKTIKTEAVKKVTHNLFKGKENTCKRRKRNVTPVESSDEDQEEFQASGSSSGGEMNENTSNSDEDEIVLKDDFPPLKRSPRENDFVIILFKTKNEKIYYVGKILEILDDEEDCDFYVSYLKLRSKVQQKFTDPKEPDTAGVNIAEIKYILPFPKIENSNNRRQTTYRFPVDISLLNMRY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01525936; iTF_00685371; iTF_00933673; iTF_00403720; iTF_00933672; iTF_00237464; iTF_00357385; iTF_01264496; iTF_01264498; iTF_00037753; iTF_00037754; iTF_01192634; iTF_00037755; iTF_01192635; iTF_01192638; iTF_01439870; iTF_00037759; iTF_01439871;
90% Identity
iTF_00037754;
80% Identity
-