Basic Information

Gene Symbol
ZFX
Assembly
GCA_002201625.1
Location
NIJG01000002.1:9376-16101[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.1 83 3.7 0.1 3 23 24 44 23 44 0.94
2 15 2.8 2.1e+02 2.5 3.4 1 23 895 918 895 918 0.80
3 15 0.00044 0.033 14.4 2.1 3 23 1002 1023 1000 1023 0.96
4 15 0.012 0.92 9.9 0.3 2 23 1036 1057 1035 1057 0.97
5 15 1.3e-05 0.001 19.2 3.1 2 23 1060 1081 1059 1081 0.97
6 15 0.011 0.82 10.0 0.3 1 23 1087 1109 1087 1109 0.95
7 15 2.2e-05 0.0016 18.5 4.5 2 23 1116 1137 1115 1138 0.95
8 15 3.5 2.6e+02 2.1 3.7 5 23 1151 1169 1150 1169 0.96
9 15 2e-05 0.0015 18.7 1.5 3 23 1176 1197 1175 1197 0.97
10 15 0.016 1.2 9.5 0.3 2 23 1213 1233 1212 1233 0.97
11 15 5.9e-05 0.0044 17.2 0.7 1 20 1239 1258 1239 1261 0.92
12 15 0.00031 0.023 14.9 2.8 1 23 1269 1291 1269 1291 0.99
13 15 0.0021 0.15 12.3 3.2 1 23 1297 1319 1297 1319 0.97
14 15 3.7e-06 0.00028 20.9 3.9 1 23 1325 1347 1325 1347 0.99
15 15 0.0013 0.097 12.9 6.3 1 23 1353 1375 1353 1376 0.96

Sequence Information

Coding Sequence
ATGTATAAACAAAATACCTCAAACACAATGGATGCAACAAATAATGGAGCGTCAGGAAGTGCAGTGGCTTGTCCAGTATGTACCCTCTATTTACGTGAGGGTATCAGCTTACAAAGACATTTGGACACTCATCCAAAAGAACAAGTCATTGAAGCTCTTATTAAAGCTAGTACGAATTCCTCACATGTGCAACAGACACAGTTGTCACCATCAGTACCTCCAACATCTCCGGCTATACAATCATCCCAAAATGCATCTCAAGTTGCACAGAATACTCATCTATCGGCTCAATCTCCATATCCTATAGGACCTATTTTTGAGTGTCCACCTATTGGTACTGTGATGCCACCTCAATTTGCTTCATTTAGTTATCAACAGTTTGTAAATAATGGCACTATGATGATACCACAATACGCAATGGCTCCACAAGCTAACCAAATGATGCAAATGCTGTATAATCCATACGGTATGTACCAGCAACAACAAATACCAACTGTTCAAATGATTTCACCAGTTACAGCCATACCTAACTCAGGTAGAGGTAGACCAGTGGTGACTATGGCTGGTGAAACAAATGGTAGGACTGCCATTGCTGTACCTGTAAATAATTCCGAGCCAAAACAAATTTTACCTGAGATTTTACCTGAATCAGAACAGGAGTCTGAACAAGTGTTACCAGATATCAACCTTCCAGTTTCTCCCCCATCATTAAATGAAGATAATTCTATGCAGCAAAATGAAAGTGAAACTAGTACAATTCAAATAGAACAAGAAGAAGATGAACCCCCTAGTTCAAGTACTACAGAGCAGCGTACTGTGCAAAATGAATATGATAGCATTCCAAGATCATTGGCAATTACTTGTAATGTCGATGATACTAATGATGATAAAGTTGAGAGTGTATTGCCGGATATTGACAATGGAGAATCGTCATGTGTTGTTACTACAGATGTGCAGTGTAAGTCTATCCATTATGAATCATCAGAAATTCAAGAGTATGTACACAGATATGAAGATGATGATGATGATAACAATAAAGTTATTATGTCTGAAGTATCACAAATGGTAACGGAAAATGAGAGAGAGAAAGCAACTAATGAAAAAGTTCCTCACAGAGAAGAAGTAAGTGAAAATGAAGGTACCTCAGCAGAAATGCCCTTAGAAGATACAGTAAAGGCACCAGCTCAGCCTGAAGTAGAACAATTAGAGCATCTTTTAATCACTATTATGGAAAATGAATTTAATAATACATCACAAAAAGAATCCAATTATGAAGATGGTAGAAAGAAGAGTAAAGATACAAAGAAAAGTCCTTCGGAAAGGGCAGAAAGTGTAATTCATGAAACAACCAATAGCAATCCCATTGAACATGATAACAATTGTAAATCTGATATAAAAATAAAAGTTAGTCAATGTTCAGAAATTGATGTAGAAGATCATGAAGAAAATAAGAGTTCTTGTTTTTCGTACCATTATAAAAACAGTTTATCTGCACCTGCATCACCTGTTGTACAAAGAAGGTCTCATAGAACCTACTCTGTTCGTTCAGACTTTGGTTCCAATGAAAATCTTAATTTTTATTCAATTGGTTTTGATGCTAATGCGATACAAGATGAAGAAGATGATGAAGATGAGAAAAATGAAGCAGAAGATAATTTTGATGAGGCAGATATGGAAATAGAAGAAATTCCTAGCCCACATACTCCTTTTACTAAATATGGCGAGAGTACAGAAAATATTAGATCACATACTCCATTGTCTGCAAGTAGTGGCATTTCTGTACTAAGAGTTAGGAAGGATCTTAGTAAACCATGTTCACCTGCTTCAGTGCATTCATTTTGTCATATGGATACTAATGGTATAAGTCACGATGAAGAAAGTAATATAGCAATGGATGAATCACCAGAAAAGGATCCTATTGATTGTTCCCTAGTTGAACAAGATGTAAAAACTGATCAATCAGAACTTTCCTTATGTAAAAATGAGAAAAATATAGAAGGAAATTCTGCATATCAATCTGGAATTACTGAACATATGAGTTCGTTTCCTACAATTCATTCACATCATTCTCAACAATCAACATCAATGGATGAATCATATAATATGCCAAGTAAAAGTAATAATCATGTAAATTTATCAGAATCTAGTGATATTGCAAGTAGTTCTGATTCAAAAAGCTTTCATTTGTCTAAATCCATTATACAAAAGCAATCAGTGGAACTCCTTAGTTTAAATGAAGATGCCCATGCAGGTCCAATGAATGTATTTGAATTTGACGGGCTTCAAATCTTAGTTCCTAGTACATTTATAAGTGATTCTTCTCAGAAAGCAGTTAGTGGAACCAGCCAACAGTCTATGGCAAGTAGTGAAGGTGGAATAGGTGTAGATGAAGAAGTTAAAAGCATTAATATGAGAGCTGATGAAACTATGCCACCCAGAGGTGAATTATCAGAACAGGAAAGCAATGGATGTACAGAACAATCTGCTTGGCAGTTGTATGCTGGTCAAGAATCATCACGGATGTCAACATCTTATGATTTAATGGCACGTGAAAGTTGGGAAGAATCAGATGGATCAGACAATGAAATTGCAGTCCCACTATTAGATAGCAGGTCTTTAGCTACACATTTTACATCAAGTTTATTTTTAGATCGAGATAGGAAAACTCCTACAAAAAGAACGTTCAAATGTTATCATTGCCCTGAAGTATTCGATTGTCCGAAAGAACGCCGGGTACATAGTACCACCGCGCACAAAGAAGCTGGACCGAGTAGCAGTAGAGAATCTACAGATCAACCTGAAGTAAAGGATATTAAGTTACTGGATGGCCGTATGAATGTGTTTGAAGATATTTTTGTACCAGGTTTACATGTTCAACAAGTTTATCATCAACAACCACTGTTACATCAACTTCAACCACCACAATCATCAGATGTAACTACAAAAGTAGAATCTGATCAAAAAATTGAAACATTAGTAATACCATCAAATATTGAAGTGATTTGCACGCTTTGCAATCAAAGATTTAGTAGTGAAAAATCATTACAGTTACATCATAGAAGAGTACATATTACAGAAACAACAAAACGAATTCGCGAGAGCACCGAGTGCCAGATATGTCATGAAGAATTTCCTTCGGTTTTGTTATTCAATGCCCATTTAAAAATACACCCATTAGAATGTAGCCAATGTGGAAAGTATTTTTATAGAAAACAAAATTTCAAATTACATATGAAACGACATTTAGGAATTAAACCATTTCCATGTACCGTTTGTGACAAAGCATTTTTAACAAAACAGAAATTGGATGAACATACTAATGGTCATACTGGGAATGCACCTGTTAAATGTAATCTTTGCAATGAAACATTTCGTAGATATTCGAATTTAACACAGCACAAAAATAGACATCATTTGAATATAAAGAAAAAATTAAAAGATTACATATGTCATTGTGGTGACGTTTTTCATACAAAAAAGAAGTTAGCTTGGCATAAAGAAACTCATGATGAAAAACCTAAAGCATGTACATATTGTAATGAAAGATTCATTCACATGGCCAGCCTGACTAGACATATGCGCCGAGCTCATAACAAAAGATTCGTTCCAGATGCTCAAAGAGAGAGCGAAAATGTTGAATGTCCCGTATGTAAGTGTATTTATTTGCGATCTTCCTTAGCAGTGCATATGCGAGTTCATAATGGTGAGAGACCATATGAATGTCAAGTTTGCTCTAAAGCATTTAGTACTAAGTGGAACTTACAATTGCACAAATGGACTCACGCTGCCCGTAGCACCAAACCTTTCAAGTGTAACCAGTGTAGTGGTGCATTTTACCGACACAGTGATTATACTGCTCATATGAATTCTCACAGAAACGTGCGTCCTTATACCTGTAACTATTGCGGAGCGCAGTTCATACGAAAATATAATTGTTTAAGGCATGTAAAAGAACATGAAGAAAACAAAGCGTATACATGCGATGTTTGCAACAAAACTTTTCATAGATCATATTATCTAAAAGAACATTTGCGAGTACATTCAGGTGCCAGACCATATACATGTCATATTTGTGGGAAATCTAGCGGTACGAAATCCAATCATAACAAACATGTCAGAATTCATCATGCACGAGAACCTGTAAATACCGAAAATTAA
Protein Sequence
MYKQNTSNTMDATNNGASGSAVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASTNSSHVQQTQLSPSVPPTSPAIQSSQNASQVAQNTHLSAQSPYPIGPIFECPPIGTVMPPQFASFSYQQFVNNGTMMIPQYAMAPQANQMMQMLYNPYGMYQQQQIPTVQMISPVTAIPNSGRGRPVVTMAGETNGRTAIAVPVNNSEPKQILPEILPESEQESEQVLPDINLPVSPPSLNEDNSMQQNESETSTIQIEQEEDEPPSSSTTEQRTVQNEYDSIPRSLAITCNVDDTNDDKVESVLPDIDNGESSCVVTTDVQCKSIHYESSEIQEYVHRYEDDDDDNNKVIMSEVSQMVTENEREKATNEKVPHREEVSENEGTSAEMPLEDTVKAPAQPEVEQLEHLLITIMENEFNNTSQKESNYEDGRKKSKDTKKSPSERAESVIHETTNSNPIEHDNNCKSDIKIKVSQCSEIDVEDHEENKSSCFSYHYKNSLSAPASPVVQRRSHRTYSVRSDFGSNENLNFYSIGFDANAIQDEEDDEDEKNEAEDNFDEADMEIEEIPSPHTPFTKYGESTENIRSHTPLSASSGISVLRVRKDLSKPCSPASVHSFCHMDTNGISHDEESNIAMDESPEKDPIDCSLVEQDVKTDQSELSLCKNEKNIEGNSAYQSGITEHMSSFPTIHSHHSQQSTSMDESYNMPSKSNNHVNLSESSDIASSSDSKSFHLSKSIIQKQSVELLSLNEDAHAGPMNVFEFDGLQILVPSTFISDSSQKAVSGTSQQSMASSEGGIGVDEEVKSINMRADETMPPRGELSEQESNGCTEQSAWQLYAGQESSRMSTSYDLMARESWEESDGSDNEIAVPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCYHCPEVFDCPKERRVHSTTAHKEAGPSSSRESTDQPEVKDIKLLDGRMNVFEDIFVPGLHVQQVYHQQPLLHQLQPPQSSDVTTKVESDQKIETLVIPSNIEVICTLCNQRFSSEKSLQLHHRRVHITETTKRIRESTECQICHEEFPSVLLFNAHLKIHPLECSQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGDVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNKRFVPDAQRESENVECPVCKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSGAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSGTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00962003;
90% Identity
iTF_00215196;
80% Identity
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