Basic Information

Gene Symbol
lilli
Assembly
GCA_002201625.1
Location
NIJG01000021.1:1475274-1561157[+]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.086 1.3e+03 -2.0 0.3 4 26 7 29 5 35 0.81
2 8 1.2e-10 1.8e-06 27.3 4.8 344 435 78 166 67 184 0.72
3 8 1 1.5e+04 -5.7 30.4 443 500 250 307 231 337 0.54
4 8 1 1.5e+04 -7.4 9.9 102 500 345 423 308 474 0.35
5 8 0.14 2.2e+03 -2.7 7.5 471 499 484 512 445 523 0.59
6 8 0.001 15 4.4 4.7 425 502 544 619 538 627 0.69
7 8 0.01 1.5e+02 1.1 4.7 196 254 865 915 845 986 0.53
8 8 0.02 3e+02 0.1 1.7 129 221 1030 1123 1001 1160 0.58

Sequence Information

Coding Sequence
ATGAAGAAGCCACGCGTGGACCGGGACCGGCTTCGGGAGCGGGAACGACAGGCCCGCGCGGCGATGTCGGTCCAGGCCGAACAGGCGGCAGCAGGAGGTGGTCCTGATACCAGACACCATCACCATGGCCACCACAACCACGCTCACCATCACGCAAACCCGCACGTCGTCTCCGCTCCGCTCTTCCGTGCTCCCGTAAGGGGAACCAGTTCCTCGAGGCCTGGGCCCACCGAGAATTCCGCGGACGTGGAGAATATTTTGAAGGAAATGACAATGCCGCCCACGCCTCTGACGGCTATCGCCCAGACGCCAAGGAAGGAGCTCGAGTCGAAGTTCACGTTCAACCCCGTGCTGGCAAAGTTGACCGAAGTGACGCCGCAGGAAGCCACGAAGCCTCAGCGCGAGAGGCACAGCGTCAACAGGCTATCGGCAGACTTGGAGCGGGACTTGAGCCTATCCGAGGACAGCGAGGATGAGACAAGCAAGGAAACGTCATCGCGGACGGCGAGGGGAAACAGAAGCCCCGACCTCACGGTCGACTTATCGACACCGTTGATACCGGCGATGACGCCAGCCCCGCCGCCTCTGGCGCCGATGTCGCCGATGGGTCTGTCGCCGGTGGGTCCGATGTCGCCCACGAGGCCGCTCAGCCCGAACAGACCGGCGTCGCCGCCGAAGCAATTGACGCCCGAGCAAGTACTTTCCCCTACACCGGTCAGTCCTCTCGAATCCAAAGGTTCCCCGAGTCCTTCGTTGCACCAAAGGCCACCCAGTCCCTCGGGCCAGGCGCCGCAGAGCTCCGGAAGCGCCAGCTCCAGCGCTAGCTCGGACTCCTGCTCGGACTCCGGGTCCGACAGCAGCGACGACTCCGAGGACGAGTCCGGCACCCAGCCCGCCAAGGGCCCCTCCACCCCTCCCTCCGTCTCACCAAAGAACGAGAACTTGATCGAAGACCCGCCGCCCGCGGTCGAGGAATCCAAGCCGAGGTGGAACCTTAGATCGTTCTTCACCAAAACCGCAATGCCGCACGAGGAGCCGAATTCGGAGAACAAGCAGGCACAGGATTGCAACAGGCGAGAAGGCGGCTCCCCGGCGGCCGCGGCGGACGCGAGGACGCACAGGGACAAAGCGGCGCACGACTGGCAGCTGGACGAGGCCCTGAAGAGGACCCACAACGCGACGATAATCAGTCTGATGGACAGCGACAGCGACCGGCCCTCGGACCAGGAGAAAGCGCAGCCGGTGGAGGAGAACCGAGCGCAGCCGGAGAAACCAAAGGTGGCGGACGCCAGGAAGCGAGGGCGGCCGAGGAAGCCTACCAAGAGTCCGAAGGACGGCCACCGGACGTCGGACGAAGGCGCGAAGAACGGCAAACCTCGCAGCAAGCCGAGAGGCGTGGGTAGCCCGATGAAGAAGAAGGCGCCCCTCTCGAAGCCGACTATAACCACCAGCGACGACGGCAGCGACGACAGATCGCAGGCCGCGTCCAGCGACTCGGACAGCGAACGGCCGACCAGGGTGTCGCCGGTGGTCCCCGCGGCCGTCAACGAGAAGAGAACCACCTCCAGGTTGAGCGGCTCTTCCAGCGAAGACGAGACTCCCCCGAACGGGAAGAACAACAGTGCCTCGGAGGACGACACCGCGCGCTGGAGACGGATGCCTATCAAGAGAAGCAAACTAGCCGACTCGCCGAAGAAGCAGGACAAGAAGAAGAGTCCGGCAAAGGCGAAACCCAGGAGATCCACCTCGCGGGTGACCAACGTCGTCGGCGGTGGCTCCGATTCCGACAGCGAGTCCGAGATGTCCGTGAGGAACCGCATCCAAGTGGCCAGAGTTCCCCCGAGGCCGAGGGCTCCGCCGACCCGCGCCACCTCTCCGGAGAATTCGGACAGCGACAACAGTCCAGGTTCGAAGCTGCAGGAGGAGGACGCGGGCAACGTGCAGGACAAGAAGAAGAGCGACACGCTTCGGAAGGTGTTCTCGTCGTCGATGGGCGGCGGGAAGGGCGGTGGTAAGGGCGGAAAGGGCGGGAAAGGCGGAGGAAAGTGCGGGATCTACGTGGAGGAGTACACGACGTCGGCGAACACGCCGACCGGAGGGGAGAGTCCGTACAAGAGACCGTCGTCGCAGGCGTCCAGCGTGATCCAGGCTTTCCCGCCGCTCACCTACGTGAACGGTGTGCCGAGTTTGTTCTGTAGGATCGAGGTGAGCAAACTGCCGCACATATCGCAGCTATCGAGAGGGCAAGAATTGAGGCAGCGGACGGAACTGCCGGACACGAGGCCGTCGTCGAGGCAAGCCTCGGCTCTGGTGACGCAACAAGCCCCTCGGCCGCCGACGCCGGAGGAAGGGGAGATCGTGGACACGCCACCGCCTCAGCAGCTCACCTCCGAGGCGAGGATTCACGCGGGCGAGGCGTTGCTGGTGGTCGACGGTGAGCTTAAGAACCGCGCTGTGATCAAGGGCGAACCTATATCGGACCCGAAGAACACTTGCGGCATCGGTGTTGGCGCTGTTGTCGTCGGTGCAGGTGCTAGTGGAGGTGGTAGTGGTGCTAGTGGTGCGGGTAGCGCGCCCAAGAGGAAACGTAATCCGAGTTGTAGTTCTGTGTCCAGTTTGAGTACTGTGTGTTCCGCGGAGACGAAGACGAAAGGCTCGGGCGAGCACAAAGAGAGGAAGAAGAGAAAGAGAAAACACGCGGACGCCGAAGCTGTTACATCCAGGCCATCTTCCAGTCAGCAAAGTGATATACAACCGACGAACCACGAACGGGAAGAAAAGCCCGACACCAGCTTGCTGCCGCCACCACCCCCGCCTCAGCGCGTCTATTATTCCTACTTCAATCCTCAGAACGAAGTTTTGGAGGATCAGGATAGGTGGGACCAGAATCAGTACCTGATGGAAGCGAAACGGCTGAAGCACAGCGCCGACAAGGAGTGCGAGCTCACGGCGCAGGGTATGCTTTACCTAGAAGCCGTTCTGTGTTTCCTGCTCACTGGCAATGCCATGGAGTCGGATCCTCTCACGGAGAGGGCGTCGTTCACCATGTACAAGGATACTCTCAGTCTCATCAAATACATCTCTTCGAAGTTCAAGAGCCAGCAGAACAACTCGCCGGAGAGCAGTATACATAACAAGCTGGCCATTCTAAGTCTCTTTTGCCAGTCCCTCATATACTTGAAGCTGTTCAAGATGCGCAAACACGAAGTCAAAGAGAACCAAAAAATCGTTACCGACTACCATCAAAAGCCCGCTCAGGCAACGCCGGTACAACCGGAGGGACAAGGTACGCCATCTTTATCGCCGACACCATCGCCAGCCGGTTCCGTGGGTTCCGTTGGCAGTCAGAGTTCCGGATATAGCAGCGGCGAACTAGCGAATCGAGGAGCCGCTTCGGGTCAACCGCAGGCAGCCCCGTACGTTAGCGTTCCGCTTAGCGTTCACAACGCTATGGCCAAGCAAAACTACCAGTTCAGCTTGCTACTCAGCTGTCACGATCTCTGGGACCAGGCAAACGCACTGGTGACGGATAAGCATAGAGATTTCTTCATCGAGCTGGATGAAAAATTGGGACCTCTTACGTTGAAAAGCTCTTTGCGTGATCTGGTGCGCTACGTTCAAGCTGGGATAAAAAAGCTTCGAGACCTCTGA
Protein Sequence
MKKPRVDRDRLRERERQARAAMSVQAEQAAAGGGPDTRHHHHGHHNHAHHHANPHVVSAPLFRAPVRGTSSSRPGPTENSADVENILKEMTMPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVTPQEATKPQRERHSVNRLSADLERDLSLSEDSEDETSKETSSRTARGNRSPDLTVDLSTPLIPAMTPAPPPLAPMSPMGLSPVGPMSPTRPLSPNRPASPPKQLTPEQVLSPTPVSPLESKGSPSPSLHQRPPSPSGQAPQSSGSASSSASSDSCSDSGSDSSDDSEDESGTQPAKGPSTPPSVSPKNENLIEDPPPAVEESKPRWNLRSFFTKTAMPHEEPNSENKQAQDCNRREGGSPAAAADARTHRDKAAHDWQLDEALKRTHNATIISLMDSDSDRPSDQEKAQPVEENRAQPEKPKVADARKRGRPRKPTKSPKDGHRTSDEGAKNGKPRSKPRGVGSPMKKKAPLSKPTITTSDDGSDDRSQAASSDSDSERPTRVSPVVPAAVNEKRTTSRLSGSSSEDETPPNGKNNSASEDDTARWRRMPIKRSKLADSPKKQDKKKSPAKAKPRRSTSRVTNVVGGGSDSDSESEMSVRNRIQVARVPPRPRAPPTRATSPENSDSDNSPGSKLQEEDAGNVQDKKKSDTLRKVFSSSMGGGKGGGKGGKGGKGGGKCGIYVEEYTTSANTPTGGESPYKRPSSQASSVIQAFPPLTYVNGVPSLFCRIEVSKLPHISQLSRGQELRQRTELPDTRPSSRQASALVTQQAPRPPTPEEGEIVDTPPPQQLTSEARIHAGEALLVVDGELKNRAVIKGEPISDPKNTCGIGVGAVVVGAGASGGGSGASGAGSAPKRKRNPSCSSVSSLSTVCSAETKTKGSGEHKERKKRKRKHADAEAVTSRPSSSQQSDIQPTNHEREEKPDTSLLPPPPPPQRVYYSYFNPQNEVLEDQDRWDQNQYLMEAKRLKHSADKECELTAQGMLYLEAVLCFLLTGNAMESDPLTERASFTMYKDTLSLIKYISSKFKSQQNNSPESSIHNKLAILSLFCQSLIYLKLFKMRKHEVKENQKIVTDYHQKPAQATPVQPEGQGTPSLSPTPSPAGSVGSVGSQSSGYSSGELANRGAASGQPQAAPYVSVPLSVHNAMAKQNYQFSLLLSCHDLWDQANALVTDKHRDFFIELDEKLGPLTLKSSLRDLVRYVQAGIKKLRDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-