Edil008721.1
Basic Information
- Insect
- Euglossa dilemma
- Gene Symbol
- -
- Assembly
- GCA_002201625.1
- Location
- NIJG01000063.1:316733-318937[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-12 4.6e-09 35.6 0.0 2 35 36 70 35 78 0.89
Sequence Information
- Coding Sequence
- CAGGCCAAGTTGTTGGAATCGTCCCACGCTTGGCTCGGAGCCTCCACATCGAGTATAGCAGCTGACTATTCGACCCTGCTGAAGCTGAAGGCGCCCACGTGGACGCGGCACGATCTCCAGGAAGCGATCGAGGCTGTGGTTACTCAGAAGATGCGCTTCACCCAGGCGTCCACGAAATACGGAATACCGAAAGGCACATTGTACGACAACATCCTGGGAAAGACGAAGAGAATGATGGTGCTGGAGGAAGCCGGGCTGAACTCGAGCGAGGAAACGGCGGTGCTCGAGTTTTGCTGCGACATCAGCGTCAGTCCGTACAATCGCCGGACGAAAAAGTCCCTGAACGCGATCCTCAACTTCGTGGAGAAGCTCAGGCGAAAACGCGACCCTAATTTCGTGTTTAACGGTCTCTCTGGCTTCCGTTGGTGGTGGGCTTTCTGTAAAAAGCACTCGATAGTATCGCTTTACTTCAACGACGAGAACGAGAACGATCAG
- Protein Sequence
- QAKLLESSHAWLGASTSSIAADYSTLLKLKAPTWTRHDLQEAIEAVVTQKMRFTQASTKYGIPKGTLYDNILGKTKRMMVLEEAGLNSSEETAVLEFCCDISVSPYNRRTKKSLNAILNFVEKLRRKRDPNFVFNGLSGFRWWWAFCKKHSIVSLYFNDENENDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00219718;
- 90% Identity
- iTF_00961746;
- 80% Identity
- iTF_00214945; iTF_00218338; iTF_00223107; iTF_00217671; iTF_00225834; iTF_00222443; iTF_00223794; iTF_00226516; iTF_00224475; iTF_00229275; iTF_00216994; iTF_00231238; iTF_00219033; iTF_00227197; iTF_00221184; iTF_00982212; iTF_00219718; iTF_00225158; iTF_00982890; iTF_00215630; iTF_00140507; iTF_00229950; iTF_00233150;