Basic Information

Insect: Euglossa dilemma
Gene Symbol: bab2_1
Assembly: GCA_002201625.1
Location: NIJG01000025.1:260736-287729[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 6.7e-13 1.1e-09 37.6 0.0 1 39 406 445 406 449 0.90

2 4 2.1e-12 3.4e-09 36.0 0.1 2 39 461 498 460 501 0.94

3 4 1.2e-18 2e-15 56.0 0.0 4 45 518 560 515 560 0.96

4 4 8.6e-19 1.4e-15 56.4 0.1 1 42 567 609 567 610 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	6.7e-13	1.1e-09	37.6	0.0	1	39	406	445	406	449	0.90
2	4	2.1e-12	3.4e-09	36.0	0.1	2	39	461	498	460	501	0.94
3	4	1.2e-18	2e-15	56.0	0.0	4	45	518	560	515	560	0.96
4	4	8.6e-19	1.4e-15	56.4	0.1	1	42	567	609	567	610	0.97

Sequence Information

Coding Sequence: ATGGTAAGCGGCGGCATGGCCGGGCAGCACTACTGCCTGCGCTGGAACAACTACCAATCGAACATGACGTCCGTTTTCCATCAACTCCTTCAGACCGAAGCTTTCGTCGACGTCACGCTGGCATGCAACGAAGCTTCCTTAAAAGCACACAAGGTGGTATTATCGGCGTGCAGTTCCTACTTTCAAAAGCTCCTACTTTCGAATCCCTGCAAACATCCGACGATCATTATGCCCCAAGACGTGTGTTTCAATGATCTCAAGTTCATCATAGAATTCGTCTACAGAGGAGAGATCGATGTTTCGCAAGCAGAACTTCAGTCACTGTTGAAAACAGCTGATCAACTAAAGATCAAAGGACTGTGCGAGGTGCCGGAAAGCAGAGACGGTCCACCTTCGGTAAGTCTGAGCTCACCGCCAAGAGAACCCGGTACCCCTAGGATAAATTTCACCAAACTGAAAAGGCATCATCCGAGATACAAGAGAGCCAGGACGACGTTCGAGCCTCGCGCTACGGATTCCAGGCATTACGATCGATACAAAGAGGAGGAATCGAACGAAAATTACAATCGGGAGAACAAAGAGAACCACAGAGACTGGCAAGCCGAAGATGAAGATTGCACGGAGACAGCCGCGGGAGCAGTAGTCTTGGAAGCTTGCCAGCGTAACAGTAACAATAGTACCATCACCACCGGCGGCCAGAACAACAACAACAACAACAACGGCAGCAGCAACGGCACCGGTAACACCACCAGCAGCAGCAACAACAACAACAACAACGGTGACATGTTTTGTCATACAGGCCTCGGTCATTACGGTCATCATCCGGATCCCGGTGAGGTTGACCTGCCACCAGAGACTCAACCGACAGCGCCCAGTGCCACGTTGGTCGGTACTACCATTACCCATCTACGAGACCCGGATCATCATGCCACAGGTGCAATCGCTGAGATCCAAAATTGCGACAGTGTAAAAATCAAGTTTGAAACGTTGCACACGATGGATTCGTCGGACACGATCGATATCGATAGCCACATGTCGGATCGAGCCAGCGTCAGTTCGAAGAACGCTACCGATAGCGACAACATGATGATGATCACGCCGGAATTGCTCGGATTAATGCCGTCTGGCAGTTCGGTTCACTCGGATTCCGGTGAAAATAATTCCAGAGGCCACTCCGGACAATCCAGCTCGCATCATCACGGCTCCAAGTCTTGGACTCAAGAGGACATGGATGCCGCTTTGGAAGCGTTACGAAATCACGACATGAGCCTTACAAAAGCCTCCGCAACCTTCGGTATACCTTCCACGACCTTATGGCAAAGGGCGCATCGGCTTGGTATCGACACCCCGAAAAAGGACGGACCGACGAAATCCTGGAGCGACGAGAGTTTAAATAACGCGCTCGAGGCATTGCGGACTGGAACGATATCGGCGAACAAAGCTTCGAAAGCGTTTGGCATACCGTCGAGCACCTTGTACAAAATCGCGAGAAGAGAAGGTATCAGATTAGCCGCGCCTTTCAATGCCAGTCCTACCACGTGGTCGCCGGTCGATCTCGACCGTGCTCTCGAAGCGATACGATCCGGCCAAACGTCCGTACAAAGAGCCTCCACCGAGTACGGTATACCAACGGGGACATTGTATGGTCGATGTAAAAGAGAGGGTATCGAACTTAGCAGGAGTAATCCTACGCCTTGGAGCGAAGACGCTATGACCGAGGCTCTCGAAGCTGTCAGATTAGGGCACATGAGCATCAATCAAGCGGCTATCCACTATAACTTACCGTACTCTTCTTTGTACGGTCGTTTTAAGAGAGGAAAATACGAAGAACCAGCGGTCGGTGAAATATCGCAAGACGGTAGCAATCCTCATTTTCATCAAAGCCCAAGTCAGAATCATTCGTCCGCCTTACCGGATCAAATGCCGTACCAAGGCAGCTGA
Protein Sequence: MVSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPREPGTPRINFTKLKRHHPRYKRARTTFEPRATDSRHYDRYKEEESNENYNRENKENHRDWQAEDEDCTETAAGAVVLEACQRNSNNSTITTGGQNNNNNNNGSSNGTGNTTSSSNNNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTAPSATLVGTTITHLRDPDHHATGAIAEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNATDSDNMMMITPELLGLMPSGSSVHSDSGENNSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPVDLDRALEAIRSGQTSVQRASTEYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPAVGEISQDGSNPHFHQSPSQNHSSALPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_00391429;
80% Identity: iTF_00684865;