Basic Information

Gene Symbol
lilli
Assembly
GCA_001483705.1
Location
NW:1387263-1543205[+]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.089 8.8e+02 -2.0 0.1 4 26 23 45 21 69 0.83
2 10 0.048 4.8e+02 -1.1 4.6 45 81 161 198 158 228 0.58
3 10 1 9.9e+03 -15.1 33.2 441 490 213 261 201 275 0.54
4 10 4.7e-11 4.6e-07 28.6 3.6 344 435 354 442 334 464 0.72
5 10 0.83 8.2e+03 -5.2 29.4 435 498 525 594 507 613 0.49
6 10 1 9.9e+03 -7.5 10.5 69 173 588 693 583 727 0.43
7 10 0.26 2.6e+03 -3.6 6.1 471 495 759 783 715 793 0.63
8 10 0.0014 14 3.9 4.5 424 502 817 893 811 900 0.71
9 10 0.016 1.6e+02 0.4 4.5 196 250 1138 1188 1119 1258 0.57
10 10 0.033 3.2e+02 -0.6 2.0 129 221 1303 1396 1274 1432 0.58

Sequence Information

Coding Sequence
ATGCCGTCGTCCGGTGGATACTATGACGACAGGAATCCTCTGCTCAAGGGCACCTTATCGAGCGTGGACCGGGACCGGCTTCGGGAGCGGGAACGACAGGCCCGCGCGGCGATGTCGGTCCAGGCCGAACAGGCGGCAGCAGGAGGTGGTCCTGATACCAGACACCATCACCATGGCCACCACAACCACGCTCACCATCACGCAAATCCGCACGCCGTCTCCGCTCCGCTCTTCAGCTCTGAATTGATCATCGTGGGTCCATCTTGGACCCTACCACTACCTGGTCACGATACGGGAGGATTCCCTGATcactgctgtctcggtggttttacaAGTTTCGTATGTCTACTGGTTGGTTGCTGTAAAACtggtggatgtttaaacaatttgggcCCTCATGCccatcgtcttaagggtgatttatCGACCtttgctaaggttcacccaagtggtgatCAGGTGAACCCAGACGCCAGAGACAGTACGACGCAGCAAATTCAATTGAAACTAGGCAACTATTCGCTGGTGAAGCATCTGCTGGACGAGCCGAAACGGCTGATCGGCATCGAGGGTGTACCACCGAGCCCAGCCCCGCCCCCGGCGCCCTCGGCCCTTCGAATGAGTTCCAGTTCGGTCGGCTCGAATTCCAGGAGCTCGCCCTCCTCCCAAGAATTCAAGAAACCCGGAGGACCGAGGACCGACGGTTCGTCCTCGTCGTCATCGGCGTCGTCCACATCcacgtcgtcgtcatcgtcgtcgtcgtcgtcgtcgagtcATCAACGCGGCGGTTTCGTGAAACCAGCCGACGGCAAGCCGCCCCACGGAGGCAGGGGTGGTTACCCCGGTCAGCCAGTGAAGCACGGGGGCAACAGCAACGATCATCGGAGCCACGGTTTATTACCCGCCAAAGGACCGCCCACGAATTCACCGGGGAACGGTACGCTCGTTGGCAATTCGAATATCGGGAATTCCAGCGGCAGCAGGCTTCACTGTGTCGGCAGCAGACTGTCCAGGTTACCTCTCGATAACGGAACGAGTTCCTCGAGGCCTGGGCCCACTGAGAATTCCGCGGACGTGGAGAATATTTTGAAGGAAATGACAATGCCGCCCACGCCTCTGACGGCCATCGCCCAGACGCCGAGGAAGGAGCTCGAGTCGAAGTTCACGTTCAACCCCGTGCTGGCGAAGTTGACCGAAGTGACGCCGCAGGAAGCCACGAAGCCTCAGCGCGAGAGGCACAGCGTCAACAGGCTATCGGCAGACTTGGAGCGGGACTTGAGCCTATCCGAGGACAGCGAGGATGAGACTAGCAAGGAAACGTCATCGCGGACGGCGAGGGGAAACAGAAGCCCCGACCTCACGGTCGATCTGTCGACACCCTTGATACCAGCGATGACGCCTGCCCCGCCGCCATTGGCGCCCATGTCACCCATGGGTCTGTCACCGGTGGGTCCGATGTCGCCCACGAGGCCACTCAGCCCCAGCAGACCGTCGTCACCGCCGAAGCAATTGACACCTGAGCAAGTACTTTCCCCTCCGCCGGTTAGTCCTTTAGAATCCAAAGGTTCTCCGAGCCCAACGTTGCACCAAAGGCCACCCAGTCCCTCGGGCCAGGCGCCCCAGAGTTCCGGAAGTGCCAGCTCTAGCGCTAGCTCCGACTCCTGCTCCGACTCCGGCTCCGACAGCAGCGACGATTCCGAGGACGAATCCGGCACCCAGCCCACCAAGGGCCCCTCTACCCCTCCCTCCGTGTCACCAAAGAACGAAAATTTGATCGAGGAACCGCCGCCCGCGGTCGAGGAATCGAAACCGAGGTGGAACCTTAGATCGTTCTTCACCAAAACCACAACGCCGCACGAGGAGCCGAATTCGGAGAACAAGCAGGCACAGGACTGCAACAGGCGAGAGGGTTCTCCGGTGGCTACGGCGGATGCCAGAACGCACAGAGACAAGGCAGCACACGACTGGCAGCTCGACGAGGCCCTCAAGAGGACCCACAACGCGACGATAATCAGTCTGCTCGACAGCGACAGCGATCGTCCCTCGGACCAGGAGAAAGCGCAGCCGGTAGAGGAAAACCGTGCACAGCCGGAGAAACCAAAGGTGGCAGACGCCAGGAAACGAGGTCGACCCAGGAAGCCTACCAAGAGTCCGAAGGATGGTCACCGGACGTCGGACGAAGGTTTGAAGAACGGCAAGCCTCGCAGCAAGCCGAGAGGTGTGGGTAGTCCTATGAAGAAGAAGGCACCCCTCTCGAAGCCCACTATAACCACCAGCGACGATGGAAGCGACGACAGATCGCAGGGTGCGTCCAGCGACTCTGACAGCGATCGACCGACCAGGGTGTCACCGGTAATCCCGCCCGTGAACGAGAAGAGGACCACGTCTAGATTGAGCGGCTCTTCCAGCGAAGACGAAAGTCCGCCGAATGGGAAGAACAACAGTGCCTCCGAGGACGATACCACGCGTTGGAGAAGGATGCCGATCAAGAGAAGCAAACTGGCCGACTCGCCGAAGAAGCAGGACAAGAAGAAGAGTCCCGCGAAAGCGAAACCCAGGAGATCTACCTCGCGGGTGACCAACGTGGTCGGCGGGGGGTCCGATTCCGACAGCGAGTCCGAGTTGTCGGTGAGGAATCGTATCCAGGTCGCCAGAGTACCCCCTAGGCCAAGGGCTCCGCCGACCCGCGCCACTTCTCCGGAGAATTCGGACAGCGACAACAGTCCAGGTTCGAAGCTGCAGGAGGAGGACGCGGGCAACGTGCAGGACAAGAAGAAGAGCGACACGCTTCGAAAGGTGTTCTCGTCCTCGATGGGCGGAGGGAAGGGTGGTGGTAAAGGAGGAAAAGGTGGGAAAGGTGGAGGAAAGTGTGGCATCTACGTGGAAGAGTACACGACCTCTGCCAATACACCTACCGGAGGGGAGAGTCCGTACAAAAGACCGTCGTCACAGACGTCCAGCGTTATTCAGTCTTTCCCGCCGCTCACGTACGTGAACGGTGTGCCGAGTTTGTTCTGTAGGatcgaggtgagcaaacttccgcATATATCGCAGCTATCGAGGGGGCAAGAGTTGAGACAGCGCACGGAACTTCCGGACACCAGGCCGTCGTCGAGACAAGCCTCGACGCTGGTAACGCAACCCCCTCGACCGCCTACACCGGAGGAAGGGGAAATCGTGGACACGCCACCGCCTCAACAGCTAGCCTCGGACACGAGGATTCACGGCGAGGCAGCGTTGCTGGTCGACGGTGACCTTAAGAATCGCGCTGTGATCAAGGGCGAGCCTATATCGGACACGAAGAACACTTGCGGCATCGGTGTTGGCGCTGTTGTCGTCGTCGGTGCAGGTGCTAGTGGAGGTGGTAGTGGTGCTAGTGGTGCGGGTAGCGCGCCCAAGAGGAAACGTAATCCGAGTTGTAGTTCTGTGTCCAGTTTGAGTACTGTGTGTTCCGCGGAGACGAAGACGAAAGGGTCGGGCGAGCACAAAGagaggaagaagagaaagagaaaacatGCCGATGTCGAAGCTGTTACATCCAGGCCATCTTCCAGTCAGCAAAGTGATATACAACCAACGAACCACGAACGGGAAGAAAAGCCTGACACCAGTTTGTTgccgccaccacccccgcctCAGCGCGTCTATTATTCCTACTTCAATCCTCAGAATGAAGTTTTGGAGGATCAGGATAGGTGGGACCAGAATCAGTACCTGATGGAAGCGAAACGGCTGAAGCACAGCGCCGACAAGGAGTGCGAGCTCACGGCGCAGGGTATGCTTTACCTAGAAGCCGTTCTGTGTTTCCTGCTCACTGGCAATGCCATGGAGTCGGATCCTCTCACGGAGAGGGCGTCGTTCACCATGTACAAGGATACTCTCAGTCTCATCAAATACATCTCTTCGAAGTTCAAGAGCCAGCAGAACAACTCGCCGGAGAGCAGTATACATAACAAGCTGGCCATTCTAAGTCTCTTTTGCCAGTCCCTCATATACTTGAAGCTGTTCAAGATGCGCAAACACGAAGTCAAAGAGAACCAAAAAATCGTTACCGACTACCATCAAAAGCCTGCTCAGGCAACACCGGTACAACCAGAGGGACAAGGTACGCCATCTTTGTCACCGACACCATCACCAGCCGGTTCCGTGGGTTCCGTTGGCAGCCAGAGTTCTGGATACAGCAGCGGCGAACTGGCGAATCGAGGAGCTGCTTCGGGTCAACCGCAGGCAGCTCCGTACGTTAGCGTTCCACTTAGTGTTCACAACGCTATGGCGAAGCAAAATTATCAGTTCAGCTTGCTGCTCAGCTGCCACGATCTCTGGGACCAGGCAAACGCTCTGGTGACGGATAAGCACAGAGATTTCTTCATCGAGCTGGATGAAAAATTGGGACCTCTCACGTTGAAAAGCTCTTTGCGCGATCTGGTGCGCTACGTTCAAGCTGGGATAAAAAAGCTTCGAGACCTCTGA
Protein Sequence
MPSSGGYYDDRNPLLKGTLSSVDRDRLRERERQARAAMSVQAEQAAAGGGPDTRHHHHGHHNHAHHHANPHAVSAPLFSSELIIVGPSWTLPLPGHDTGGFPDHCCLGGFTSFVCLLVGCCKTGGCLNNLGPHAHRLKGDLSTFAKVHPSGDQVNPDARDSTTQQIQLKLGNYSLVKHLLDEPKRLIGIEGVPPSPAPPPAPSALRMSSSSVGSNSRSSPSSQEFKKPGGPRTDGSSSSSSASSTSTSSSSSSSSSSSHQRGGFVKPADGKPPHGGRGGYPGQPVKHGGNSNDHRSHGLLPAKGPPTNSPGNGTLVGNSNIGNSSGSRLHCVGSRLSRLPLDNGTSSSRPGPTENSADVENILKEMTMPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVTPQEATKPQRERHSVNRLSADLERDLSLSEDSEDETSKETSSRTARGNRSPDLTVDLSTPLIPAMTPAPPPLAPMSPMGLSPVGPMSPTRPLSPSRPSSPPKQLTPEQVLSPPPVSPLESKGSPSPTLHQRPPSPSGQAPQSSGSASSSASSDSCSDSGSDSSDDSEDESGTQPTKGPSTPPSVSPKNENLIEEPPPAVEESKPRWNLRSFFTKTTTPHEEPNSENKQAQDCNRREGSPVATADARTHRDKAAHDWQLDEALKRTHNATIISLLDSDSDRPSDQEKAQPVEENRAQPEKPKVADARKRGRPRKPTKSPKDGHRTSDEGLKNGKPRSKPRGVGSPMKKKAPLSKPTITTSDDGSDDRSQGASSDSDSDRPTRVSPVIPPVNEKRTTSRLSGSSSEDESPPNGKNNSASEDDTTRWRRMPIKRSKLADSPKKQDKKKSPAKAKPRRSTSRVTNVVGGGSDSDSESELSVRNRIQVARVPPRPRAPPTRATSPENSDSDNSPGSKLQEEDAGNVQDKKKSDTLRKVFSSSMGGGKGGGKGGKGGKGGGKCGIYVEEYTTSANTPTGGESPYKRPSSQTSSVIQSFPPLTYVNGVPSLFCRIEVSKLPHISQLSRGQELRQRTELPDTRPSSRQASTLVTQPPRPPTPEEGEIVDTPPPQQLASDTRIHGEAALLVDGDLKNRAVIKGEPISDTKNTCGIGVGAVVVVGAGASGGGSGASGAGSAPKRKRNPSCSSVSSLSTVCSAETKTKGSGEHKERKKRKRKHADVEAVTSRPSSSQQSDIQPTNHEREEKPDTSLLPPPPPPQRVYYSYFNPQNEVLEDQDRWDQNQYLMEAKRLKHSADKECELTAQGMLYLEAVLCFLLTGNAMESDPLTERASFTMYKDTLSLIKYISSKFKSQQNNSPESSIHNKLAILSLFCQSLIYLKLFKMRKHEVKENQKIVTDYHQKPAQATPVQPEGQGTPSLSPTPSPAGSVGSVGSQSSGYSSGELANRGAASGQPQAAPYVSVPLSVHNAMAKQNYQFSLLLSCHDLWDQANALVTDKHRDFFIELDEKLGPLTLKSSLRDLVRYVQAGIKKLRDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01123054;
90% Identity
-
80% Identity
-